RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 RBM3P98179 157 aaKnown RBP10.17□□□□□ -0.78
TOP3A-219ENST00000584887 MPLKIPQ8TAP9 179 aa10.17□□□□□ -0.78
TOP3A-219ENST00000584887 DSCR8Q96T75 97 aa10.16□□□□□ -0.78
TOP3A-219ENST00000584887 UQCR10Q9UDW1 63 aa10.16□□□□□ -0.78
TOP3A-219ENST00000584887 MT1FP04733 61 aa10.12□□□□□ -0.79
TOP3A-219ENST00000584887 USH2AO75445 5202 aa10.12□□□□□ -0.79
TOP3A-219ENST00000584887 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-219ENST00000584887 KRTAP10-10P60014 251 aa10.11□□□□□ -0.79
TOP3A-219ENST00000584887 ZCCHC13Q8WW36 166 aaKnown RBP10.1□□□□□ -0.79
TOP3A-219ENST00000584887 C9JAW5 83 aa10.09□□□□□ -0.79
TOP3A-219ENST00000584887 BAALC-AS2P0C853 105 aa10.09□□□□□ -0.79
TOP3A-219ENST00000584887 J3KT08 172 aa10.08□□□□□ -0.8
TOP3A-219ENST00000584887 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
TOP3A-219ENST00000584887 SSPOA2VEC9 5147 aa10.06□□□□□ -0.8
TOP3A-219ENST00000584887 KRTAP9-7A8MTY7 169 aa10.05□□□□□ -0.8
TOP3A-219ENST00000584887 SPINK7P58062 85 aa10.05□□□□□ -0.8
TOP3A-219ENST00000584887 C21orf62-AS1Q17RA5 79 aa10.04□□□□□ -0.8
TOP3A-219ENST00000584887 LCE2BO14633 110 aa10.03□□□□□ -0.8
TOP3A-219ENST00000584887 NDUFB1O75438 58 aa10.03□□□□□ -0.8
TOP3A-219ENST00000584887 Q6ZQT0 140 aa10.03□□□□□ -0.8
TOP3A-219ENST00000584887 LYRM7Q5U5X0 104 aa10.02□□□□□ -0.81
TOP3A-219ENST00000584887 KRTAP9-3Q9BYQ3 159 aa10.01□□□□□ -0.81
TOP3A-219ENST00000584887 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
TOP3A-219ENST00000584887 KRTAP19-1Q8IUB9 90 aa9.97□□□□□ -0.81
TOP3A-219ENST00000584887 Q8N9P0 234 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-219ENST00000584887 C8orf17Q9NRJ1 99 aa9.97□□□□□ -0.81
TOP3A-219ENST00000584887 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
TOP3A-219ENST00000584887 A8MWP4 228 aa9.95□□□□□ -0.82
TOP3A-219ENST00000584887 ATXN8Q156A1 80 aa9.95□□□□□ -0.82
TOP3A-219ENST00000584887 WFDC13Q8IUB5 93 aa9.95□□□□□ -0.82
TOP3A-219ENST00000584887 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
TOP3A-219ENST00000584887 LOC110117498A0A087WWA1 95 aa9.91□□□□□ -0.82
TOP3A-219ENST00000584887 IGKV3D-7A0A0C4DH55 119 aa9.91□□□□□ -0.82
TOP3A-219ENST00000584887 FCGBPQ9Y6R7 5405 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-219ENST00000584887 M0R143 59 aa9.9□□□□□ -0.82
TOP3A-219ENST00000584887 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.82
TOP3A-219ENST00000584887 Q6ZVQ6 151 aa9.89□□□□□ -0.83
TOP3A-219ENST00000584887 PDE6GP18545 87 aa9.87□□□□□ -0.83
TOP3A-219ENST00000584887 A0A1B0GW54 56 aa9.86□□□□□ -0.83
TOP3A-219ENST00000584887 NREPQ16612 68 aa9.83□□□□□ -0.84
TOP3A-219ENST00000584887 PRR15Q8IV56 129 aa9.83□□□□□ -0.84
TOP3A-219ENST00000584887 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
TOP3A-219ENST00000584887 TMEM254Q8TBM7 123 aa9.78□□□□□ -0.84
TOP3A-219ENST00000584887 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
TOP3A-219ENST00000584887 NDUFS5O43920 106 aa9.77□□□□□ -0.85
TOP3A-219ENST00000584887 PCP4L1A6NKN8 68 aa9.76□□□□□ -0.85
TOP3A-219ENST00000584887 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
TOP3A-219ENST00000584887 hDV103S1A0JD37 113 aa9.72□□□□□ -0.85
TOP3A-219ENST00000584887 K7EQZ3 153 aa9.72□□□□□ -0.85
TOP3A-219ENST00000584887 BATFQ16520 125 aa9.72□□□□□ -0.85
TOP3A-219ENST00000584887 H1FX-AS1Q4G0G2 97 aa9.71□□□□□ -0.86
TOP3A-219ENST00000584887 KRTAP19-6Q3LI70 58 aa9.69□□□□□ -0.86
TOP3A-219ENST00000584887 IGKV2D-30A0A075B6S6 120 aa9.68□□□□□ -0.86
TOP3A-219ENST00000584887 IGKV2-30P06310 120 aa9.68□□□□□ -0.86
TOP3A-219ENST00000584887 BPY2O14599 106 aa9.64□□□□□ -0.87
TOP3A-219ENST00000584887 H3BT86 120 aa9.62□□□□□ -0.87
TOP3A-219ENST00000584887 C7orf65Q6ZTY9 151 aa9.61□□□□□ -0.87
TOP3A-219ENST00000584887 Q5W150 140 aa9.59□□□□□ -0.87
TOP3A-219ENST00000584887 MACF1Q9UPN3 7388 aaKnown RBP9.58□□□□□ -0.88
TOP3A-219ENST00000584887 C9orf118A6NHY6 69 aa9.57□□□□□ -0.88
TOP3A-219ENST00000584887 COL5A1-AS1Q5SY13 56 aa9.57□□□□□ -0.88
TOP3A-219ENST00000584887 Q8N9L7 120 aa9.57□□□□□ -0.88
TOP3A-219ENST00000584887 CASC2Q6XLA1 102 aa9.55□□□□□ -0.88
TOP3A-219ENST00000584887 A0A1W2PPM0 123 aa9.54□□□□□ -0.88
TOP3A-219ENST00000584887 HCG22E2RYF7 251 aa9.54□□□□□ -0.88
TOP3A-219ENST00000584887 TAX1BP3O14907 124 aa9.52□□□□□ -0.89
TOP3A-219ENST00000584887 SYNE2Q8WXH0 6885 aaKnown RBP9.52□□□□□ -0.89
TOP3A-219ENST00000584887 C4orf26Q17RF5 130 aa9.51□□□□□ -0.89
TOP3A-219ENST00000584887 CXCL6P80162 114 aa9.44□□□□□ -0.9
TOP3A-219ENST00000584887 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
TOP3A-219ENST00000584887 SPCS1Q9Y6A9 102 aa9.42□□□□□ -0.9
TOP3A-219ENST00000584887 FAM236AA0A1B0GUQ0 79 aa9.4□□□□□ -0.9
TOP3A-219ENST00000584887 FAM236BA0A1B0GV22 79 aa9.4□□□□□ -0.9
TOP3A-219ENST00000584887 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-219ENST00000584887 KRTAP6-3Q3LI67 103 aa9.36□□□□□ -0.91
TOP3A-219ENST00000584887 UBL5Q9BZL1 73 aa9.36□□□□□ -0.91
TOP3A-219ENST00000584887 S4R3F8 94 aa9.34□□□□□ -0.91
TOP3A-219ENST00000584887 C1orf64Q8NEQ6 169 aa9.3□□□□□ -0.92
TOP3A-219ENST00000584887 KRTAP3-1Q9BYR8 98 aa9.3□□□□□ -0.92
TOP3A-219ENST00000584887 K7EP34 96 aa9.29□□□□□ -0.92
TOP3A-219ENST00000584887 A0A1B0GV90 55 aa9.28□□□□□ -0.92
TOP3A-219ENST00000584887 CSAG1Q6PB30 78 aa9.28□□□□□ -0.92
TOP3A-219ENST00000584887 GTF2H5Q6ZYL4 71 aa9.28□□□□□ -0.92
TOP3A-219ENST00000584887 LCA10Q71F78 164 aa9.25□□□□□ -0.93
TOP3A-219ENST00000584887 A6NN06 94 aa9.24□□□□□ -0.93
TOP3A-219ENST00000584887 Q5VV11 94 aa9.23□□□□□ -0.93
TOP3A-219ENST00000584887 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
TOP3A-219ENST00000584887 MT1BP07438 61 aa9.21□□□□□ -0.94
TOP3A-219ENST00000584887 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
TOP3A-219ENST00000584887 SPRR2GQ9BYE4 73 aa9.16□□□□□ -0.94
TOP3A-219ENST00000584887 F8W1H4 67 aa9.15□□□□□ -0.94
TOP3A-219ENST00000584887 KRTAP19-8Q3LI54 63 aa9.14□□□□□ -0.95
TOP3A-219ENST00000584887 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
TOP3A-219ENST00000584887 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
TOP3A-219ENST00000584887 CYP4F30PQ9H0H9 118 aa9.05□□□□□ -0.96
TOP3A-219ENST00000584887 KRTAP10-5P60370 271 aa9.04□□□□□ -0.96
TOP3A-219ENST00000584887 NEBP20929 6669 aa9.03□□□□□ -0.96
TOP3A-219ENST00000584887 ETDBQ3ZM63 59 aa9.02□□□□□ -0.97
TOP3A-219ENST00000584887 A0A087WVE0 104 aa9.01□□□□□ -0.97
TOP3A-219ENST00000584887 TRAV22A0A0B4J277 110 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms