RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 DSCR8Q96T75 97 aa9.15□□□□□ -0.94
SRSF1-208ENST00000584773 TRBV20-1A0A075B6N2 111 aa9.13□□□□□ -0.95
SRSF1-208ENST00000584773 C9orf118A6NHY6 69 aa9.12□□□□□ -0.95
SRSF1-208ENST00000584773 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
SRSF1-208ENST00000584773 A0A1B0GV90 55 aa9.1□□□□□ -0.95
SRSF1-208ENST00000584773 C9JAW5 83 aa9.1□□□□□ -0.95
SRSF1-208ENST00000584773 ATXN8Q156A1 80 aa9.08□□□□□ -0.96
SRSF1-208ENST00000584773 HRES1P13985 223 aa9.07□□□□□ -0.96
SRSF1-208ENST00000584773 Q6ZQT0 140 aa9.07□□□□□ -0.96
SRSF1-208ENST00000584773 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
SRSF1-208ENST00000584773 A0A1W2PPM0 123 aa9.05□□□□□ -0.96
SRSF1-208ENST00000584773 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
SRSF1-208ENST00000584773 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
SRSF1-208ENST00000584773 KRTAP9-8Q9BYQ0 159 aa9.05□□□□□ -0.96
SRSF1-208ENST00000584773 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
SRSF1-208ENST00000584773 LYRM7Q5U5X0 104 aa9.02□□□□□ -0.97
SRSF1-208ENST00000584773 J3KT08 172 aa9.01□□□□□ -0.97
SRSF1-208ENST00000584773 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
SRSF1-208ENST00000584773 LOC110117498A0A087WWA1 95 aa9□□□□□ -0.97
SRSF1-208ENST00000584773 JMJD7-PLA2G4BH0Y9G9 81 aa9□□□□□ -0.97
SRSF1-208ENST00000584773 K7EP34 96 aa8.98□□□□□ -0.97
SRSF1-208ENST00000584773 ZCCHC13Q8WW36 166 aaKnown RBP8.98□□□□□ -0.97
SRSF1-208ENST00000584773 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
SRSF1-208ENST00000584773 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
SRSF1-208ENST00000584773 GTF2H5Q6ZYL4 71 aa8.97□□□□□ -0.97
SRSF1-208ENST00000584773 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
SRSF1-208ENST00000584773 USH2AO75445 5202 aa8.96□□□□□ -0.98
SRSF1-208ENST00000584773 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
SRSF1-208ENST00000584773 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
SRSF1-208ENST00000584773 A8MWP4 228 aa8.94□□□□□ -0.98
SRSF1-208ENST00000584773 NDUFB1O75438 58 aa8.94□□□□□ -0.98
SRSF1-208ENST00000584773 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
SRSF1-208ENST00000584773 MT2AP02795 61 aa8.92□□□□□ -0.98
SRSF1-208ENST00000584773 MTURNQ8N3F0 131 aa8.92□□□□□ -0.98
SRSF1-208ENST00000584773 SPINK7P58062 85 aa8.91□□□□□ -0.98
SRSF1-208ENST00000584773 PDE6GP18545 87 aa8.9□□□□□ -0.98
SRSF1-208ENST00000584773 A0A1B0GW54 56 aa8.89□□□□□ -0.99
SRSF1-208ENST00000584773 SSPOA2VEC9 5147 aa8.89□□□□□ -0.99
SRSF1-208ENST00000584773 MT1FP04733 61 aa8.87□□□□□ -0.99
SRSF1-208ENST00000584773 NREPQ16612 68 aa8.87□□□□□ -0.99
SRSF1-208ENST00000584773 Q6ZVQ6 151 aa8.86□□□□□ -0.99
SRSF1-208ENST00000584773 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
SRSF1-208ENST00000584773 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
SRSF1-208ENST00000584773 PRO0461Q9UI25 63 aa8.83□□□□□ -1
SRSF1-208ENST00000584773 F8W1H4 67 aa8.82□□□□□ -1
SRSF1-208ENST00000584773 H3BT86 120 aa8.81□□□□□ -1
SRSF1-208ENST00000584773 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
SRSF1-208ENST00000584773 K7EQZ3 153 aa8.8□□□□□ -1
SRSF1-208ENST00000584773 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
SRSF1-208ENST00000584773 KRTAP10-10P60014 251 aa8.78□□□□□ -1
SRSF1-208ENST00000584773 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
SRSF1-208ENST00000584773 SMCPP49901 116 aaPredicted RBP8.77□□□□□ -1.01
SRSF1-208ENST00000584773 LCE2BO14633 110 aa8.76□□□□□ -1.01
SRSF1-208ENST00000584773 KRTAP9-3Q9BYQ3 159 aa8.76□□□□□ -1.01
SRSF1-208ENST00000584773 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
SRSF1-208ENST00000584773 NDUFS5O43920 106 aa8.73□□□□□ -1.01
SRSF1-208ENST00000584773 BPY2O14599 106 aa8.71□□□□□ -1.02
SRSF1-208ENST00000584773 Q8N9L7 120 aa8.71□□□□□ -1.02
SRSF1-208ENST00000584773 ETDBQ3ZM63 59 aa8.67□□□□□ -1.02
SRSF1-208ENST00000584773 FCGBPQ9Y6R7 5405 aaPredicted RBP8.67□□□□□ -1.02
SRSF1-208ENST00000584773 Q5W150 140 aa8.66□□□□□ -1.02
SRSF1-208ENST00000584773 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
SRSF1-208ENST00000584773 IGKV2-30P06310 120 aa8.63□□□□□ -1.03
SRSF1-208ENST00000584773 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
SRSF1-208ENST00000584773 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
SRSF1-208ENST00000584773 CASC2Q6XLA1 102 aa8.6□□□□□ -1.03
SRSF1-208ENST00000584773 HCG22E2RYF7 251 aa8.59□□□□□ -1.03
SRSF1-208ENST00000584773 K7ERU9 68 aa8.58□□□□□ -1.04
SRSF1-208ENST00000584773 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
SRSF1-208ENST00000584773 J3QR89 54 aa8.57□□□□□ -1.04
SRSF1-208ENST00000584773 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
SRSF1-208ENST00000584773 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
SRSF1-208ENST00000584773 KRTAP9-7A8MTY7 169 aa8.51□□□□□ -1.05
SRSF1-208ENST00000584773 UBL5Q9BZL1 73 aa8.5□□□□□ -1.05
SRSF1-208ENST00000584773 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
SRSF1-208ENST00000584773 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
SRSF1-208ENST00000584773 CXCL6P80162 114 aa8.47□□□□□ -1.05
SRSF1-208ENST00000584773 ACYP1P07311 99 aa8.45□□□□□ -1.06
SRSF1-208ENST00000584773 KRTAP19-6Q3LI70 58 aa8.4□□□□□ -1.06
SRSF1-208ENST00000584773 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
SRSF1-208ENST00000584773 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
SRSF1-208ENST00000584773 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
SRSF1-208ENST00000584773 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
SRSF1-208ENST00000584773 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
SRSF1-208ENST00000584773 LINC00643Q86TS7 51 aa8.29□□□□□ -1.08
SRSF1-208ENST00000584773 S4R3F8 94 aa8.29□□□□□ -1.08
SRSF1-208ENST00000584773 TP53AIP1Q9HCN2 124 aa8.27□□□□□ -1.09
SRSF1-208ENST00000584773 LCA10Q71F78 164 aa8.26□□□□□ -1.09
SRSF1-208ENST00000584773 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
SRSF1-208ENST00000584773 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
SRSF1-208ENST00000584773 ATP5EP2Q5VTU8 51 aa8.23□□□□□ -1.09
SRSF1-208ENST00000584773 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
SRSF1-208ENST00000584773 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
SRSF1-208ENST00000584773 IMUPQ9GZP8 106 aa8.18□□□□□ -1.1
SRSF1-208ENST00000584773 CYP4F30PQ9H0H9 118 aa8.18□□□□□ -1.1
SRSF1-208ENST00000584773 A0A087WVE0 104 aa8.15□□□□□ -1.1
SRSF1-208ENST00000584773 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
SRSF1-208ENST00000584773 TRAV22A0A0B4J277 110 aa8.13□□□□□ -1.11
SRSF1-208ENST00000584773 MT1BP07438 61 aa8.12□□□□□ -1.11
SRSF1-208ENST00000584773 SCGB1A1P11684 91 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms