RNA–Protein interactions for RNA: ENST00000584496.1

GRIN2C-205, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

TSL 1 (best)

Gene GRIN2C, Length 1,984 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-205ENST00000584496 A0A087X002 238 aa12.96□□□□□ -0.33
GRIN2C-205ENST00000584496 KRTAP10-1P60331 282 aa12.96□□□□□ -0.33
GRIN2C-205ENST00000584496 NOTCH2NLQ7Z3S9 236 aa12.96□□□□□ -0.33
GRIN2C-205ENST00000584496 FAT2Q9NYQ8 4349 aa12.95□□□□□ -0.34
GRIN2C-205ENST00000584496 SSBP3-AS1Q7Z2R9 100 aa12.94□□□□□ -0.34
GRIN2C-205ENST00000584496 MPLKIPQ8TAP9 179 aa12.94□□□□□ -0.34
GRIN2C-205ENST00000584496 MRPL34Q9BQ48 92 aaKnown RBP12.92□□□□□ -0.34
GRIN2C-205ENST00000584496 HYDINQ4G0P3 5121 aa12.89□□□□□ -0.35
GRIN2C-205ENST00000584496 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
GRIN2C-205ENST00000584496 SPINK6Q6UWN8 80 aa12.87□□□□□ -0.35
GRIN2C-205ENST00000584496 LINC00336Q6ZUF6 198 aa12.87□□□□□ -0.35
GRIN2C-205ENST00000584496 NDUFS5O43920 106 aa12.85□□□□□ -0.35
GRIN2C-205ENST00000584496 KRTAP13-2Q52LG2 175 aa12.85□□□□□ -0.35
GRIN2C-205ENST00000584496 Q1T7F1 81 aa12.84□□□□□ -0.35
GRIN2C-205ENST00000584496 IGLV7-46A0A075B6I9 117 aa12.81□□□□□ -0.36
GRIN2C-205ENST00000584496 PCOTHQ58A44 107 aa12.78□□□□□ -0.36
GRIN2C-205ENST00000584496 KRTAP1-4P0C5Y4 121 aa12.77□□□□□ -0.37
GRIN2C-205ENST00000584496 KRTAP13-3Q3SY46 172 aa12.76□□□□□ -0.37
GRIN2C-205ENST00000584496 C8orf87E5RJ46 101 aa12.75□□□□□ -0.37
GRIN2C-205ENST00000584496 Q5W150 140 aa12.72□□□□□ -0.37
GRIN2C-205ENST00000584496 C1orf195Q5TG92 126 aa12.71□□□□□ -0.37
GRIN2C-205ENST00000584496 PRO0628Q9UI54 55 aa12.7□□□□□ -0.38
GRIN2C-205ENST00000584496 COA5Q86WW8 74 aa12.67□□□□□ -0.38
GRIN2C-205ENST00000584496 Q8N9P0 234 aaPredicted RBP12.67□□□□□ -0.38
GRIN2C-205ENST00000584496 LOC101927531A0A1B0GV80 90 aa12.65□□□□□ -0.38
GRIN2C-205ENST00000584496 VPS13BQ7Z7G8 4022 aa12.65□□□□□ -0.38
GRIN2C-205ENST00000584496 LINC00313P59037 77 aa12.63□□□□□ -0.39
GRIN2C-205ENST00000584496 V9GYY9 64 aa12.63□□□□□ -0.39
GRIN2C-205ENST00000584496 BRK1Q8WUW1 75 aa12.61□□□□□ -0.39
GRIN2C-205ENST00000584496 SACSQ9NZJ4 4579 aa12.61□□□□□ -0.39
GRIN2C-205ENST00000584496 PSPHP1O15172 72 aa12.6□□□□□ -0.39
GRIN2C-205ENST00000584496 LIMD2Q9BT23 127 aa12.58□□□□□ -0.4
GRIN2C-205ENST00000584496 KRTAP16-1A8MUX0 517 aa12.57□□□□□ -0.4
GRIN2C-205ENST00000584496 PLA2G1BP04054 148 aaKnown RBP12.56□□□□□ -0.4
GRIN2C-205ENST00000584496 A8MUN3 132 aa12.55□□□□□ -0.4
GRIN2C-205ENST00000584496 HRES1P13985 223 aa12.53□□□□□ -0.4
GRIN2C-205ENST00000584496 TYMSOSQ8TAI1 123 aa12.52□□□□□ -0.41
GRIN2C-205ENST00000584496 FAM229AH3BQW9 127 aa12.51□□□□□ -0.41
GRIN2C-205ENST00000584496 Q5VV11 94 aa12.5□□□□□ -0.41
GRIN2C-205ENST00000584496 PKHD1P08F94 4074 aa12.5□□□□□ -0.41
GRIN2C-205ENST00000584496 SPINK1P00995 79 aa12.47□□□□□ -0.41
GRIN2C-205ENST00000584496 C4orf48Q5BLP8 95 aa12.47□□□□□ -0.41
GRIN2C-205ENST00000584496 DYNC1H1Q14204 4646 aaKnown RBP12.45□□□□□ -0.42
GRIN2C-205ENST00000584496 IGKV2-30P06310 120 aa12.43□□□□□ -0.42
GRIN2C-205ENST00000584496 RETNLBQ9BQ08 111 aa12.43□□□□□ -0.42
GRIN2C-205ENST00000584496 A0A1B0GVY2 172 aa12.42□□□□□ -0.42
GRIN2C-205ENST00000584496 PRR15LQ9BU68 103 aa12.42□□□□□ -0.42
GRIN2C-205ENST00000584496 PRR26Q8N8Z3 221 aa12.4□□□□□ -0.42
GRIN2C-205ENST00000584496 RPS29P62273 56 aaKnown RBP12.37□□□□□ -0.43
GRIN2C-205ENST00000584496 LINC01558Q9Y6Z2 57 aa12.37□□□□□ -0.43
GRIN2C-205ENST00000584496 LINC00304Q8N9R0 145 aa12.36□□□□□ -0.43
GRIN2C-205ENST00000584496 SMR3BP02814 79 aaPredicted RBP12.35□□□□□ -0.43
GRIN2C-205ENST00000584496 DMAC1Q96GE9 116 aa12.35□□□□□ -0.43
GRIN2C-205ENST00000584496 SPAG11AQ6PDA7 123 aa12.34□□□□□ -0.43
GRIN2C-205ENST00000584496 Q75L30 129 aa12.34□□□□□ -0.43
GRIN2C-205ENST00000584496 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
GRIN2C-205ENST00000584496 ACYP2P14621 99 aa12.32□□□□□ -0.44
GRIN2C-205ENST00000584496 CHKB-CPT1BH3BT56 60 aa12.32□□□□□ -0.44
GRIN2C-205ENST00000584496 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
GRIN2C-205ENST00000584496 RYR2Q92736 4967 aa12.31□□□□□ -0.44
GRIN2C-205ENST00000584496 KMT2CQ8NEZ4 4911 aaKnown RBP12.31□□□□□ -0.44
GRIN2C-205ENST00000584496 PKHD1L1Q86WI1 4243 aa12.26□□□□□ -0.45
GRIN2C-205ENST00000584496 A8MU10 97 aa12.25□□□□□ -0.45
GRIN2C-205ENST00000584496 FAT1Q14517 4588 aa12.23□□□□□ -0.45
GRIN2C-205ENST00000584496 IGKV2D-30A0A075B6S6 120 aa12.21□□□□□ -0.45
GRIN2C-205ENST00000584496 LCA10Q71F78 164 aa12.16□□□□□ -0.46
GRIN2C-205ENST00000584496 A6NED7 52 aa12.14□□□□□ -0.47
GRIN2C-205ENST00000584496 SPINK7P58062 85 aa12.07□□□□□ -0.48
GRIN2C-205ENST00000584496 C7orf65Q6ZTY9 151 aa12.07□□□□□ -0.48
GRIN2C-205ENST00000584496 CDC42SE1Q9NRR8 79 aa12.06□□□□□ -0.48
GRIN2C-205ENST00000584496 A8MUU9 505 aa12.05□□□□□ -0.48
GRIN2C-205ENST00000584496 C20orf166-AS1Q96NR2 134 aa12.05□□□□□ -0.48
GRIN2C-205ENST00000584496 C9orf92A6NGG3 77 aa12.03□□□□□ -0.48
GRIN2C-205ENST00000584496 ATP11AUNQ6ZP68 121 aa11.98□□□□□ -0.49
GRIN2C-205ENST00000584496 RYR3Q15413 4870 aa11.97□□□□□ -0.49
GRIN2C-205ENST00000584496 Q8N1X5 172 aa11.92□□□□□ -0.5
GRIN2C-205ENST00000584496 PMAIP1Q13794 54 aa11.91□□□□□ -0.5
GRIN2C-205ENST00000584496 SPTSSBQ8NFR3 76 aa11.91□□□□□ -0.5
GRIN2C-205ENST00000584496 A0A1B0GU69 56 aa11.9□□□□□ -0.5
GRIN2C-205ENST00000584496 FLG2Q5D862 2391 aaPredicted RBP11.86□□□□□ -0.51
GRIN2C-205ENST00000584496 KRTAP10-8P60410 259 aa11.83□□□□□ -0.52
GRIN2C-205ENST00000584496 TNXBP22105 4242 aa11.83□□□□□ -0.52
GRIN2C-205ENST00000584496 A6NN06 94 aa11.82□□□□□ -0.52
GRIN2C-205ENST00000584496 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
GRIN2C-205ENST00000584496 HSPG2P98160 4391 aa11.81□□□□□ -0.52
GRIN2C-205ENST00000584496 Q5VSD8 79 aa11.79□□□□□ -0.52
GRIN2C-205ENST00000584496 KRTAP3-1Q9BYR8 98 aa11.78□□□□□ -0.52
GRIN2C-205ENST00000584496 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
GRIN2C-205ENST00000584496 SPATA8Q6RVD6 105 aa11.72□□□□□ -0.53
GRIN2C-205ENST00000584496 KRTAP17-1Q9BYP8 105 aa11.68□□□□□ -0.54
GRIN2C-205ENST00000584496 UQCR11O14957 56 aa11.67□□□□□ -0.54
GRIN2C-205ENST00000584496 KTN1-AS1Q86SY8 53 aa11.65□□□□□ -0.54
GRIN2C-205ENST00000584496 RYR1P21817 5038 aa11.65□□□□□ -0.55
GRIN2C-205ENST00000584496 MIR22HGQ0VDD5 57 aa11.63□□□□□ -0.55
GRIN2C-205ENST00000584496 COX6B2Q6YFQ2 88 aa11.59□□□□□ -0.55
GRIN2C-205ENST00000584496 EPPK1P58107 5090 aaKnown RBP11.55□□□□□ -0.56
GRIN2C-205ENST00000584496 SEC61GP60059 68 aa11.55□□□□□ -0.56
GRIN2C-205ENST00000584496 RPL37P61927 97 aaKnown RBP11.55□□□□□ -0.56
GRIN2C-205ENST00000584496 KIAA1109Q2LD37 5005 aa11.54□□□□□ -0.56
GRIN2C-205ENST00000584496 MT1HL1P0DM35 61 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms