RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 A0A0U1RQV1 116 aa13.15□□□□□ -0.3
MIR3960-201ENST00000583311 Q75L30 129 aa13.15□□□□□ -0.3
MIR3960-201ENST00000583311 IGHV6-1A0A0B4J1U7 121 aa13.14□□□□□ -0.31
MIR3960-201ENST00000583311 NDUFB1O75438 58 aa13.13□□□□□ -0.31
MIR3960-201ENST00000583311 A0A1B0GVX0 72 aa13.12□□□□□ -0.31
MIR3960-201ENST00000583311 C8orf87E5RJ46 101 aa13.11□□□□□ -0.31
MIR3960-201ENST00000583311 C20orf166-AS1Q96NR2 134 aa13.09□□□□□ -0.31
MIR3960-201ENST00000583311 ATP11AUNQ6ZP68 121 aa13.08□□□□□ -0.32
MIR3960-201ENST00000583311 A8MWP4 228 aa13.07□□□□□ -0.32
MIR3960-201ENST00000583311 A8MUU9 505 aa13.05□□□□□ -0.32
MIR3960-201ENST00000583311 ETDBQ3ZM63 59 aa13.03□□□□□ -0.32
MIR3960-201ENST00000583311 NOTCH2NLQ7Z3S9 236 aa13.02□□□□□ -0.33
MIR3960-201ENST00000583311 KRTAP4-1Q9BYQ7 146 aa13.02□□□□□ -0.33
MIR3960-201ENST00000583311 KRTAP16-1A8MUX0 517 aa13.01□□□□□ -0.33
MIR3960-201ENST00000583311 IGKV3D-7A0A0C4DH55 119 aa12.98□□□□□ -0.33
MIR3960-201ENST00000583311 BPY2O14599 106 aa12.98□□□□□ -0.33
MIR3960-201ENST00000583311 Q6ZVQ6 151 aa12.98□□□□□ -0.33
MIR3960-201ENST00000583311 UBL5Q9BZL1 73 aa12.97□□□□□ -0.33
MIR3960-201ENST00000583311 PRR15Q8IV56 129 aa12.96□□□□□ -0.33
MIR3960-201ENST00000583311 C8orf17Q9NRJ1 99 aa12.93□□□□□ -0.34
MIR3960-201ENST00000583311 LINC00846Q9NV44 126 aa12.93□□□□□ -0.34
MIR3960-201ENST00000583311 A0A1B0GV90 55 aa12.9□□□□□ -0.34
MIR3960-201ENST00000583311 K7EQZ3 153 aa12.87□□□□□ -0.35
MIR3960-201ENST00000583311 Q8N9P0 234 aaPredicted RBP12.82□□□□□ -0.36
MIR3960-201ENST00000583311 MMP24-AS1A0A0U1RRL7 71 aa12.81□□□□□ -0.36
MIR3960-201ENST00000583311 ACYP1P07311 99 aa12.79□□□□□ -0.36
MIR3960-201ENST00000583311 TMEM254Q8TBM7 123 aa12.79□□□□□ -0.36
MIR3960-201ENST00000583311 hDV103S1A0JD37 113 aa12.78□□□□□ -0.36
MIR3960-201ENST00000583311 FAT4Q6V0I7 4981 aa12.77□□□□□ -0.36
MIR3960-201ENST00000583311 MRPL34Q9BQ48 92 aaKnown RBP12.76□□□□□ -0.37
MIR3960-201ENST00000583311 Q8N9L7 120 aa12.74□□□□□ -0.37
MIR3960-201ENST00000583311 ZCCHC13Q8WW36 166 aaKnown RBP12.74□□□□□ -0.37
MIR3960-201ENST00000583311 FAM240AA0A1B0GVK7 77 aa12.73□□□□□ -0.37
MIR3960-201ENST00000583311 CXCL6P80162 114 aa12.71□□□□□ -0.37
MIR3960-201ENST00000583311 CASC2Q6XLA1 102 aa12.68□□□□□ -0.38
MIR3960-201ENST00000583311 NDUFS5O43920 106 aa12.66□□□□□ -0.38
MIR3960-201ENST00000583311 WFDC13Q8IUB5 93 aa12.66□□□□□ -0.38
MIR3960-201ENST00000583311 KRTAP19-2Q3LHN2 52 aa12.65□□□□□ -0.38
MIR3960-201ENST00000583311 LCE2AQ5TA79 106 aaPredicted RBP12.64□□□□□ -0.39
MIR3960-201ENST00000583311 COX6B2Q6YFQ2 88 aa12.64□□□□□ -0.39
MIR3960-201ENST00000583311 HCG22E2RYF7 251 aa12.61□□□□□ -0.39
MIR3960-201ENST00000583311 LCE2CQ5TA81 110 aa12.6□□□□□ -0.39
MIR3960-201ENST00000583311 ATP5EP2Q5VTU8 51 aa12.58□□□□□ -0.4
MIR3960-201ENST00000583311 J3QR89 54 aa12.54□□□□□ -0.4
MIR3960-201ENST00000583311 SPINK7P58062 85 aa12.52□□□□□ -0.41
MIR3960-201ENST00000583311 RBM12B-AS1Q9P1G2 102 aa12.5□□□□□ -0.41
MIR3960-201ENST00000583311 LINC00643Q86TS7 51 aa12.48□□□□□ -0.41
MIR3960-201ENST00000583311 HRES1P13985 223 aa12.47□□□□□ -0.41
MIR3960-201ENST00000583311 MT1HP80294 61 aa12.46□□□□□ -0.41
MIR3960-201ENST00000583311 FAM236DA0A1B0GTK5 79 aa12.43□□□□□ -0.42
MIR3960-201ENST00000583311 FAM236CP0DP71 79 aa12.43□□□□□ -0.42
MIR3960-201ENST00000583311 HIST1H4AP62805 103 aaKnown RBP12.42□□□□□ -0.42
MIR3960-201ENST00000583311 MPLKIPQ8TAP9 179 aa12.42□□□□□ -0.42
MIR3960-201ENST00000583311 Q5W150 140 aa12.4□□□□□ -0.42
MIR3960-201ENST00000583311 TP53AIP1Q9HCN2 124 aa12.4□□□□□ -0.42
MIR3960-201ENST00000583311 M0R2T5 61 aa12.36□□□□□ -0.43
MIR3960-201ENST00000583311 C7orf65Q6ZTY9 151 aa12.34□□□□□ -0.43
MIR3960-201ENST00000583311 IGKV2D-30A0A075B6S6 120 aa12.33□□□□□ -0.44
MIR3960-201ENST00000583311 IGKV2-30P06310 120 aa12.33□□□□□ -0.44
MIR3960-201ENST00000583311 FLGP20930 4061 aaPredicted RBP12.31□□□□□ -0.44
MIR3960-201ENST00000583311 K7ERU9 68 aa12.25□□□□□ -0.45
MIR3960-201ENST00000583311 A0A087WVE0 104 aa12.22□□□□□ -0.45
MIR3960-201ENST00000583311 TRAV22A0A0B4J277 110 aa12.15□□□□□ -0.46
MIR3960-201ENST00000583311 KRTAP10-6P60371 365 aaPredicted RBP12.15□□□□□ -0.46
MIR3960-201ENST00000583311 UQCRQO14949 82 aa12.14□□□□□ -0.47
MIR3960-201ENST00000583311 LORP23490 312 aaPredicted RBP12.12□□□□□ -0.47
MIR3960-201ENST00000583311 ATOX1O00244 68 aa12.06□□□□□ -0.48
MIR3960-201ENST00000583311 LOC101927531A0A1B0GV80 90 aa12.05□□□□□ -0.48
MIR3960-201ENST00000583311 C4orf26Q17RF5 130 aa12.05□□□□□ -0.48
MIR3960-201ENST00000583311 H1FX-AS1Q4G0G2 97 aa12.05□□□□□ -0.48
MIR3960-201ENST00000583311 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
MIR3960-201ENST00000583311 H0Y9P7 68 aa12.03□□□□□ -0.48
MIR3960-201ENST00000583311 CYP4F30PQ9H0H9 118 aa12.01□□□□□ -0.49
MIR3960-201ENST00000583311 SCGB1A1P11684 91 aa11.97□□□□□ -0.49
MIR3960-201ENST00000583311 OCR1Q9BZK8 76 aa11.97□□□□□ -0.49
MIR3960-201ENST00000583311 MT-ATP8P03928 68 aa11.95□□□□□ -0.5
MIR3960-201ENST00000583311 MP68P56378 58 aa11.93□□□□□ -0.5
MIR3960-201ENST00000583311 KRTAP9-2Q9BYQ4 174 aa11.92□□□□□ -0.5
MIR3960-201ENST00000583311 C1orf64Q8NEQ6 169 aa11.91□□□□□ -0.5
MIR3960-201ENST00000583311 C5orf47Q569G3 176 aa11.9□□□□□ -0.5
MIR3960-201ENST00000583311 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
MIR3960-201ENST00000583311 LINC00208Q96KT6 92 aa11.87□□□□□ -0.51
MIR3960-201ENST00000583311 KRTAP9-8Q9BYQ0 159 aa11.84□□□□□ -0.51
MIR3960-201ENST00000583311 H3BPC8 53 aa11.82□□□□□ -0.52
MIR3960-201ENST00000583311 KRTAP3-1Q9BYR8 98 aa11.82□□□□□ -0.52
MIR3960-201ENST00000583311 FAM236AA0A1B0GUQ0 79 aa11.78□□□□□ -0.52
MIR3960-201ENST00000583311 FAM236BA0A1B0GV22 79 aa11.78□□□□□ -0.52
MIR3960-201ENST00000583311 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
MIR3960-201ENST00000583311 S4R3F8 94 aa11.75□□□□□ -0.53
MIR3960-201ENST00000583311 MT2AP02795 61 aa11.73□□□□□ -0.53
MIR3960-201ENST00000583311 TRAV7A0A075B6U4 112 aa11.69□□□□□ -0.54
MIR3960-201ENST00000583311 KLKP1Q107X0 134 aa11.69□□□□□ -0.54
MIR3960-201ENST00000583311 KRTAP10-10P60014 251 aa11.66□□□□□ -0.54
MIR3960-201ENST00000583311 A8MUN3 132 aa11.65□□□□□ -0.54
MIR3960-201ENST00000583311 MT1FP04733 61 aa11.63□□□□□ -0.55
MIR3960-201ENST00000583311 LCA10Q71F78 164 aa11.63□□□□□ -0.55
MIR3960-201ENST00000583311 CSAG1Q6PB30 78 aa11.61□□□□□ -0.55
MIR3960-201ENST00000583311 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
MIR3960-201ENST00000583311 NDUFC1O43677 76 aa11.46□□□□□ -0.57
MIR3960-201ENST00000583311 SERP2Q8N6R1 65 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms