RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 FAM240AA0A1B0GVK7 77 aa5.09□□□□□ -1.59
PDLIM1P2-201ENST00000582923 J3KT08 172 aa5.09□□□□□ -1.59
PDLIM1P2-201ENST00000582923 ACYP1P07311 99 aa5.09□□□□□ -1.59
PDLIM1P2-201ENST00000582923 C5orf47Q569G3 176 aa5.09□□□□□ -1.59
PDLIM1P2-201ENST00000582923 BPY2O14599 106 aa5.07□□□□□ -1.6
PDLIM1P2-201ENST00000582923 NDUFB1O75438 58 aa5.06□□□□□ -1.6
PDLIM1P2-201ENST00000582923 IGHV6-1A0A0B4J1U7 121 aa5.05□□□□□ -1.6
PDLIM1P2-201ENST00000582923 C9orf92A6NGG3 77 aa5.05□□□□□ -1.6
PDLIM1P2-201ENST00000582923 TPRXLQ17RH7 258 aa5.05□□□□□ -1.6
PDLIM1P2-201ENST00000582923 A8MWP4 228 aa5.04□□□□□ -1.6
PDLIM1P2-201ENST00000582923 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
PDLIM1P2-201ENST00000582923 A0A1B0GVX0 72 aa5.03□□□□□ -1.6
PDLIM1P2-201ENST00000582923 DSCR10P59022 87 aa5.02□□□□□ -1.61
PDLIM1P2-201ENST00000582923 IGKV3D-7A0A0C4DH55 119 aa5.01□□□□□ -1.61
PDLIM1P2-201ENST00000582923 K7EQZ3 153 aa5.01□□□□□ -1.61
PDLIM1P2-201ENST00000582923 ATP5EP2Q5VTU8 51 aa5.01□□□□□ -1.61
PDLIM1P2-201ENST00000582923 C8orf87E5RJ46 101 aa5□□□□□ -1.61
PDLIM1P2-201ENST00000582923 CXCL6P80162 114 aa5□□□□□ -1.61
PDLIM1P2-201ENST00000582923 PRR15Q8IV56 129 aa5□□□□□ -1.61
PDLIM1P2-201ENST00000582923 Q8N9L7 120 aa5□□□□□ -1.61
PDLIM1P2-201ENST00000582923 HERC1Q15751 4861 aa4.99□□□□□ -1.61
PDLIM1P2-201ENST00000582923 LINC00313P59037 77 aa4.99□□□□□ -1.61
PDLIM1P2-201ENST00000582923 LINC00643Q86TS7 51 aa4.99□□□□□ -1.61
PDLIM1P2-201ENST00000582923 XP32Q5T750 250 aa4.98□□□□□ -1.61
PDLIM1P2-201ENST00000582923 C8orf17Q9NRJ1 99 aa4.98□□□□□ -1.61
PDLIM1P2-201ENST00000582923 NOTCH2NLQ7Z3S9 236 aa4.97□□□□□ -1.61
PDLIM1P2-201ENST00000582923 SMIM20Q8N5G0 67 aa4.97□□□□□ -1.61
PDLIM1P2-201ENST00000582923 MMP24-AS1A0A0U1RRL7 71 aa4.95□□□□□ -1.62
PDLIM1P2-201ENST00000582923 HIST1H4AP62805 103 aaKnown RBP4.95□□□□□ -1.62
PDLIM1P2-201ENST00000582923 HMCN2Q8NDA2 5059 aa4.94□□□□□ -1.62
PDLIM1P2-201ENST00000582923 WFDC13Q8IUB5 93 aa4.94□□□□□ -1.62
PDLIM1P2-201ENST00000582923 hDV103S1A0JD37 113 aa4.93□□□□□ -1.62
PDLIM1P2-201ENST00000582923 KRTAP16-1A8MUX0 517 aa4.93□□□□□ -1.62
PDLIM1P2-201ENST00000582923 HCG22E2RYF7 251 aa4.93□□□□□ -1.62
PDLIM1P2-201ENST00000582923 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
PDLIM1P2-201ENST00000582923 TMEM254Q8TBM7 123 aa4.93□□□□□ -1.62
PDLIM1P2-201ENST00000582923 RPL37P61927 97 aaKnown RBP4.92□□□□□ -1.62
PDLIM1P2-201ENST00000582923 Q75L30 129 aa4.91□□□□□ -1.62
PDLIM1P2-201ENST00000582923 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
PDLIM1P2-201ENST00000582923 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
PDLIM1P2-201ENST00000582923 A8MUU9 505 aa4.9□□□□□ -1.63
PDLIM1P2-201ENST00000582923 NDUFS5O43920 106 aa4.9□□□□□ -1.63
PDLIM1P2-201ENST00000582923 SEC61GP60059 68 aa4.9□□□□□ -1.63
PDLIM1P2-201ENST00000582923 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
PDLIM1P2-201ENST00000582923 A0A087WVE0 104 aa4.89□□□□□ -1.63
PDLIM1P2-201ENST00000582923 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
PDLIM1P2-201ENST00000582923 ATP11AUNQ6ZP68 121 aa4.89□□□□□ -1.63
PDLIM1P2-201ENST00000582923 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
PDLIM1P2-201ENST00000582923 MT-ATP8P03928 68 aa4.88□□□□□ -1.63
PDLIM1P2-201ENST00000582923 PCOTHQ58A44 107 aa4.87□□□□□ -1.63
PDLIM1P2-201ENST00000582923 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
PDLIM1P2-201ENST00000582923 LPAP08519 4548 aa4.87□□□□□ -1.63
PDLIM1P2-201ENST00000582923 ZCCHC13Q8WW36 166 aaKnown RBP4.84□□□□□ -1.63
PDLIM1P2-201ENST00000582923 IMUPQ9GZP8 106 aa4.84□□□□□ -1.63
PDLIM1P2-201ENST00000582923 ANAPC13Q9BS18 74 aa4.83□□□□□ -1.64
PDLIM1P2-201ENST00000582923 LRP2P98164 4655 aa4.82□□□□□ -1.64
PDLIM1P2-201ENST00000582923 TP53AIP1Q9HCN2 124 aa4.8□□□□□ -1.64
PDLIM1P2-201ENST00000582923 FAM236AA0A1B0GUQ0 79 aa4.79□□□□□ -1.64
PDLIM1P2-201ENST00000582923 FAM236BA0A1B0GV22 79 aa4.79□□□□□ -1.64
PDLIM1P2-201ENST00000582923 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
PDLIM1P2-201ENST00000582923 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
PDLIM1P2-201ENST00000582923 V9GYY9 64 aa4.78□□□□□ -1.64
PDLIM1P2-201ENST00000582923 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
PDLIM1P2-201ENST00000582923 UQCRQO14949 82 aa4.76□□□□□ -1.65
PDLIM1P2-201ENST00000582923 Q5W150 140 aa4.76□□□□□ -1.65
PDLIM1P2-201ENST00000582923 TRAV22A0A0B4J277 110 aa4.75□□□□□ -1.65
PDLIM1P2-201ENST00000582923 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
PDLIM1P2-201ENST00000582923 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
PDLIM1P2-201ENST00000582923 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
PDLIM1P2-201ENST00000582923 CCDC179H3BU77 68 aa4.74□□□□□ -1.65
PDLIM1P2-201ENST00000582923 IGKV2-30P06310 120 aa4.74□□□□□ -1.65
PDLIM1P2-201ENST00000582923 OCR1Q9BZK8 76 aa4.74□□□□□ -1.65
PDLIM1P2-201ENST00000582923 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
PDLIM1P2-201ENST00000582923 H0Y9P7 68 aa4.73□□□□□ -1.65
PDLIM1P2-201ENST00000582923 ATOX1O00244 68 aa4.73□□□□□ -1.65
PDLIM1P2-201ENST00000582923 SPINK7P58062 85 aa4.73□□□□□ -1.65
PDLIM1P2-201ENST00000582923 C7orf65Q6ZTY9 151 aa4.72□□□□□ -1.65
PDLIM1P2-201ENST00000582923 MP68P56378 58 aa4.71□□□□□ -1.66
PDLIM1P2-201ENST00000582923 TRAV7A0A075B6U4 112 aa4.69□□□□□ -1.66
PDLIM1P2-201ENST00000582923 LOC101927531A0A1B0GV80 90 aa4.69□□□□□ -1.66
PDLIM1P2-201ENST00000582923 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
PDLIM1P2-201ENST00000582923 A0A0U1RQV1 116 aa4.68□□□□□ -1.66
PDLIM1P2-201ENST00000582923 LINC00208Q96KT6 92 aa4.68□□□□□ -1.66
PDLIM1P2-201ENST00000582923 HRES1P13985 223 aa4.67□□□□□ -1.66
PDLIM1P2-201ENST00000582923 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
PDLIM1P2-201ENST00000582923 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
PDLIM1P2-201ENST00000582923 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
PDLIM1P2-201ENST00000582923 C4orf26Q17RF5 130 aa4.66□□□□□ -1.66
PDLIM1P2-201ENST00000582923 COX6B2Q6YFQ2 88 aa4.66□□□□□ -1.66
PDLIM1P2-201ENST00000582923 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
PDLIM1P2-201ENST00000582923 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
PDLIM1P2-201ENST00000582923 H3BPC8 53 aa4.65□□□□□ -1.67
PDLIM1P2-201ENST00000582923 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
PDLIM1P2-201ENST00000582923 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
PDLIM1P2-201ENST00000582923 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
PDLIM1P2-201ENST00000582923 MPLKIPQ8TAP9 179 aa4.6□□□□□ -1.67
PDLIM1P2-201ENST00000582923 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
PDLIM1P2-201ENST00000582923 SNURFQ9Y675 71 aa4.59□□□□□ -1.67
PDLIM1P2-201ENST00000582923 MUC2Q02817 5179 aa4.59□□□□□ -1.68
PDLIM1P2-201ENST00000582923 COX7CP15954 63 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms