RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 A0A1B0GV72 72 aa7.19□□□□□ -1.26
ITGB4-208ENST00000582629 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
ITGB4-208ENST00000582629 MT1FP04733 61 aa7.19□□□□□ -1.26
ITGB4-208ENST00000582629 TAX1BP3O14907 124 aa7.18□□□□□ -1.26
ITGB4-208ENST00000582629 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
ITGB4-208ENST00000582629 TMEM256-PLSCR3K7ERE1 68 aa7.17□□□□□ -1.26
ITGB4-208ENST00000582629 DEFB116Q30KQ4 102 aa7.17□□□□□ -1.26
ITGB4-208ENST00000582629 TRACP01848 142 aa7.16□□□□□ -1.26
ITGB4-208ENST00000582629 CCKP06307 115 aa7.16□□□□□ -1.26
ITGB4-208ENST00000582629 LCE2BO14633 110 aa7.15□□□□□ -1.26
ITGB4-208ENST00000582629 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
ITGB4-208ENST00000582629 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
ITGB4-208ENST00000582629 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
ITGB4-208ENST00000582629 C9orf118A6NHY6 69 aa7.14□□□□□ -1.27
ITGB4-208ENST00000582629 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
ITGB4-208ENST00000582629 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
ITGB4-208ENST00000582629 MTURNQ8N3F0 131 aa7.13□□□□□ -1.27
ITGB4-208ENST00000582629 UBE2V1Q13404 147 aa7.12□□□□□ -1.27
ITGB4-208ENST00000582629 A0A1B0GVX0 72 aa7.11□□□□□ -1.27
ITGB4-208ENST00000582629 ATXN8Q156A1 80 aa7.11□□□□□ -1.27
ITGB4-208ENST00000582629 BAALC-AS2P0C853 105 aa7.1□□□□□ -1.27
ITGB4-208ENST00000582629 A0A1W2PPM0 123 aa7.09□□□□□ -1.27
ITGB4-208ENST00000582629 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
ITGB4-208ENST00000582629 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
ITGB4-208ENST00000582629 COL5A1-AS1Q5SY13 56 aa7.07□□□□□ -1.28
ITGB4-208ENST00000582629 C9JAW5 83 aa7.05□□□□□ -1.28
ITGB4-208ENST00000582629 SPINK7P58062 85 aa7.05□□□□□ -1.28
ITGB4-208ENST00000582629 RBM3P98179 157 aaKnown RBP7.05□□□□□ -1.28
ITGB4-208ENST00000582629 DSCR8Q96T75 97 aa7.05□□□□□ -1.28
ITGB4-208ENST00000582629 J3KT08 172 aa7.04□□□□□ -1.28
ITGB4-208ENST00000582629 C21orf62-AS1Q17RA5 79 aa7.04□□□□□ -1.28
ITGB4-208ENST00000582629 LYRM7Q5U5X0 104 aa7.04□□□□□ -1.28
ITGB4-208ENST00000582629 LINC00846Q9NV44 126 aa7.02□□□□□ -1.29
ITGB4-208ENST00000582629 SPCS1Q9Y6A9 102 aa7.01□□□□□ -1.29
ITGB4-208ENST00000582629 NDUFB1O75438 58 aa7□□□□□ -1.29
ITGB4-208ENST00000582629 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
ITGB4-208ENST00000582629 MACF1Q9UPN3 7388 aaKnown RBP6.98□□□□□ -1.29
ITGB4-208ENST00000582629 A8MWP4 228 aa6.98□□□□□ -1.29
ITGB4-208ENST00000582629 Q6ZQT0 140 aa6.98□□□□□ -1.29
ITGB4-208ENST00000582629 KRTAP19-6Q3LI70 58 aa6.97□□□□□ -1.29
ITGB4-208ENST00000582629 WFDC13Q8IUB5 93 aa6.97□□□□□ -1.29
ITGB4-208ENST00000582629 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
ITGB4-208ENST00000582629 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.3
ITGB4-208ENST00000582629 K7EP34 96 aa6.95□□□□□ -1.3
ITGB4-208ENST00000582629 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
ITGB4-208ENST00000582629 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
ITGB4-208ENST00000582629 H3BT86 120 aa6.94□□□□□ -1.3
ITGB4-208ENST00000582629 JMJD7-PLA2G4BH0Y9G9 81 aa6.93□□□□□ -1.3
ITGB4-208ENST00000582629 PRO0461Q9UI25 63 aa6.92□□□□□ -1.3
ITGB4-208ENST00000582629 LOC110117498A0A087WWA1 95 aa6.91□□□□□ -1.3
ITGB4-208ENST00000582629 A0A1B0GW54 56 aa6.91□□□□□ -1.3
ITGB4-208ENST00000582629 IGKV3D-7A0A0C4DH55 119 aa6.89□□□□□ -1.31
ITGB4-208ENST00000582629 Q6ZVQ6 151 aa6.89□□□□□ -1.31
ITGB4-208ENST00000582629 PDE6GP18545 87 aa6.86□□□□□ -1.31
ITGB4-208ENST00000582629 GTF2H5Q6ZYL4 71 aa6.86□□□□□ -1.31
ITGB4-208ENST00000582629 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
ITGB4-208ENST00000582629 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
ITGB4-208ENST00000582629 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
ITGB4-208ENST00000582629 MRPL34Q9BQ48 92 aaKnown RBP6.83□□□□□ -1.32
ITGB4-208ENST00000582629 A0A1B0GV90 55 aa6.81□□□□□ -1.32
ITGB4-208ENST00000582629 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
ITGB4-208ENST00000582629 NREPQ16612 68 aa6.8□□□□□ -1.32
ITGB4-208ENST00000582629 F8W1H4 67 aa6.79□□□□□ -1.32
ITGB4-208ENST00000582629 ETDBQ3ZM63 59 aa6.78□□□□□ -1.32
ITGB4-208ENST00000582629 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
ITGB4-208ENST00000582629 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
ITGB4-208ENST00000582629 NDUFS5O43920 106 aa6.76□□□□□ -1.33
ITGB4-208ENST00000582629 K7EQZ3 153 aa6.74□□□□□ -1.33
ITGB4-208ENST00000582629 IGKV2D-30A0A075B6S6 120 aa6.73□□□□□ -1.33
ITGB4-208ENST00000582629 IGKV2-30P06310 120 aa6.73□□□□□ -1.33
ITGB4-208ENST00000582629 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
ITGB4-208ENST00000582629 Q5W150 140 aa6.69□□□□□ -1.34
ITGB4-208ENST00000582629 BPY2O14599 106 aa6.66□□□□□ -1.34
ITGB4-208ENST00000582629 Q8N9L7 120 aa6.66□□□□□ -1.34
ITGB4-208ENST00000582629 C4orf26Q17RF5 130 aa6.62□□□□□ -1.35
ITGB4-208ENST00000582629 UBL5Q9BZL1 73 aa6.62□□□□□ -1.35
ITGB4-208ENST00000582629 HCG22E2RYF7 251 aa6.61□□□□□ -1.35
ITGB4-208ENST00000582629 CASC2Q6XLA1 102 aa6.61□□□□□ -1.35
ITGB4-208ENST00000582629 NEBP20929 6669 aa6.59□□□□□ -1.35
ITGB4-208ENST00000582629 FAM236AA0A1B0GUQ0 79 aa6.59□□□□□ -1.35
ITGB4-208ENST00000582629 FAM236BA0A1B0GV22 79 aa6.59□□□□□ -1.35
ITGB4-208ENST00000582629 CXCL6P80162 114 aa6.58□□□□□ -1.36
ITGB4-208ENST00000582629 C5orf47Q569G3 176 aa6.58□□□□□ -1.36
ITGB4-208ENST00000582629 A6NN06 94 aa6.57□□□□□ -1.36
ITGB4-208ENST00000582629 MT1BP07438 61 aa6.54□□□□□ -1.36
ITGB4-208ENST00000582629 Q5VV11 94 aa6.54□□□□□ -1.36
ITGB4-208ENST00000582629 S4R3F8 94 aa6.54□□□□□ -1.36
ITGB4-208ENST00000582629 ACYP1P07311 99 aa6.53□□□□□ -1.36
ITGB4-208ENST00000582629 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
ITGB4-208ENST00000582629 FAM240AA0A1B0GVK7 77 aa6.52□□□□□ -1.37
ITGB4-208ENST00000582629 CSAG1Q6PB30 78 aa6.52□□□□□ -1.37
ITGB4-208ENST00000582629 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
ITGB4-208ENST00000582629 KRTAP19-8Q3LI54 63 aa6.51□□□□□ -1.37
ITGB4-208ENST00000582629 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
ITGB4-208ENST00000582629 LCA10Q71F78 164 aa6.48□□□□□ -1.37
ITGB4-208ENST00000582629 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
ITGB4-208ENST00000582629 KRTAP10-5P60370 271 aa6.45□□□□□ -1.38
ITGB4-208ENST00000582629 KLKP1Q107X0 134 aa6.43□□□□□ -1.38
ITGB4-208ENST00000582629 LINC00643Q86TS7 51 aa6.42□□□□□ -1.38
ITGB4-208ENST00000582629 HIST1H4AP62805 103 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms