RNA–Protein interactions for RNA: ENST00000582277.5

NDEL1-212, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-212ENST00000582277 DMXL1Q9Y485 3027 aa2.39□□□□□ -2.03
NDEL1-212ENST00000582277 NBPF19A0A087WUL8 3843 aa2.39□□□□□ -2.03
NDEL1-212ENST00000582277 KRTAP13-3Q3SY46 172 aa2.39□□□□□ -2.03
NDEL1-212ENST00000582277 BDP1A6H8Y1 2624 aa2.38□□□□□ -2.03
NDEL1-212ENST00000582277 ATMQ13315 3056 aa2.38□□□□□ -2.03
NDEL1-212ENST00000582277 A0A096LNI7 61 aa2.38□□□□□ -2.03
NDEL1-212ENST00000582277 LAMA5O15230 3695 aa2.38□□□□□ -2.03
NDEL1-212ENST00000582277 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
NDEL1-212ENST00000582277 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
NDEL1-212ENST00000582277 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
NDEL1-212ENST00000582277 ASH1LQ9NR48 2969 aaKnown RBP2.37□□□□□ -2.03
NDEL1-212ENST00000582277 AKAP9Q99996 3911 aa2.37□□□□□ -2.03
NDEL1-212ENST00000582277 CHD6Q8TD26 2715 aa2.37□□□□□ -2.03
NDEL1-212ENST00000582277 ZNF292O60281 2723 aa2.36□□□□□ -2.03
NDEL1-212ENST00000582277 GVINP1Q7Z2Y8 2422 aa2.36□□□□□ -2.03
NDEL1-212ENST00000582277 MUC3AQ02505 3323 aa2.36□□□□□ -2.03
NDEL1-212ENST00000582277 SETXQ7Z333 2677 aaKnown RBP2.35□□□□□ -2.03
NDEL1-212ENST00000582277 SSBP3-AS1Q7Z2R9 100 aa2.35□□□□□ -2.03
NDEL1-212ENST00000582277 CEP295Q9C0D2 2601 aa2.34□□□□□ -2.03
NDEL1-212ENST00000582277 CSPG4Q6UVK1 2322 aa2.34□□□□□ -2.04
NDEL1-212ENST00000582277 VPS13CQ709C8 3753 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 DOPEY1Q5JWR5 2465 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 K7EIL1 84 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 LY6G6CO95867 125 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 HIVEP3Q5T1R4 2406 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 TLN2Q9Y4G6 2542 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 DNAH1Q9P2D7 4330 aa2.33□□□□□ -2.04
NDEL1-212ENST00000582277 ALMS1Q8TCU4 4167 aa2.32□□□□□ -2.04
NDEL1-212ENST00000582277 JMJD1CQ15652 2540 aa2.32□□□□□ -2.04
NDEL1-212ENST00000582277 UTP20O75691 2785 aaKnown RBP2.32□□□□□ -2.04
NDEL1-212ENST00000582277 COL12A1Q99715 3063 aa2.31□□□□□ -2.04
NDEL1-212ENST00000582277 MYO9AB2RTY4 2548 aa2.31□□□□□ -2.04
NDEL1-212ENST00000582277 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
NDEL1-212ENST00000582277 NBASA2RRP1 2371 aa2.3□□□□□ -2.04
NDEL1-212ENST00000582277 SPG11Q96JI7 2443 aa2.3□□□□□ -2.04
NDEL1-212ENST00000582277 ITPR1Q14643 2758 aa2.3□□□□□ -2.04
NDEL1-212ENST00000582277 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
NDEL1-212ENST00000582277 ANK3Q12955 4377 aaKnown RBP2.3□□□□□ -2.04
NDEL1-212ENST00000582277 CRYBG3Q68DQ2 2970 aa2.29□□□□□ -2.04
NDEL1-212ENST00000582277 IGF2RP11717 2491 aa2.29□□□□□ -2.04
NDEL1-212ENST00000582277 MXRA5Q9NR99 2828 aa2.29□□□□□ -2.04
NDEL1-212ENST00000582277 NAV2Q8IVL1 2488 aa2.28□□□□□ -2.04
NDEL1-212ENST00000582277 SPINK6Q6UWN8 80 aa2.28□□□□□ -2.04
NDEL1-212ENST00000582277 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.04
NDEL1-212ENST00000582277 NCOR2Q9Y618 2525 aa2.28□□□□□ -2.04
NDEL1-212ENST00000582277 TTC28Q96AY4 2481 aa2.27□□□□□ -2.05
NDEL1-212ENST00000582277 H0YAA0 97 aa2.27□□□□□ -2.05
NDEL1-212ENST00000582277 GCN1Q92616 2671 aaKnown RBP2.27□□□□□ -2.05
NDEL1-212ENST00000582277 USP9YO00507 2555 aaPredicted RBP2.27□□□□□ -2.05
NDEL1-212ENST00000582277 FBN2P35556 2912 aa2.27□□□□□ -2.05
NDEL1-212ENST00000582277 CELSR2Q9HCU4 2923 aa2.27□□□□□ -2.05
NDEL1-212ENST00000582277 FAM208BQ5VWN6 2430 aa2.27□□□□□ -2.05
NDEL1-212ENST00000582277 NBEAL2Q6ZNJ1 2754 aa2.26□□□□□ -2.05
NDEL1-212ENST00000582277 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
NDEL1-212ENST00000582277 Q6ZSA8 131 aa2.26□□□□□ -2.05
NDEL1-212ENST00000582277 USP9XQ93008 2570 aaPredicted RBP2.26□□□□□ -2.05
NDEL1-212ENST00000582277 RIF1Q5UIP0 2472 aaKnown RBP2.26□□□□□ -2.05
NDEL1-212ENST00000582277 NIPBLQ6KC79 2804 aaeCLIP2.25□□□□□ -2.05
NDEL1-212ENST00000582277 MUC6Q6W4X9 2439 aa2.25□□□□□ -2.05
NDEL1-212ENST00000582277 UBE2DNLQ8IWF7 75 aa2.25□□□□□ -2.05
NDEL1-212ENST00000582277 ZANQ9Y493 2812 aa2.25□□□□□ -2.05
NDEL1-212ENST00000582277 ZFYVE26Q68DK2 2539 aa2.25□□□□□ -2.05
NDEL1-212ENST00000582277 CSMD2Q7Z408 3487 aa2.23□□□□□ -2.05
NDEL1-212ENST00000582277 SPINK1P00995 79 aa2.23□□□□□ -2.05
NDEL1-212ENST00000582277 APCP25054 2843 aa2.23□□□□□ -2.05
NDEL1-212ENST00000582277 NF1P21359 2839 aa2.22□□□□□ -2.05
NDEL1-212ENST00000582277 NOTCH2Q04721 2471 aa2.22□□□□□ -2.05
NDEL1-212ENST00000582277 HIVEP2P31629 2446 aa2.22□□□□□ -2.05
NDEL1-212ENST00000582277 POLQO75417 2590 aa2.21□□□□□ -2.06
NDEL1-212ENST00000582277 LRRK2Q5S007 2527 aa2.21□□□□□ -2.06
NDEL1-212ENST00000582277 TEX15Q9BXT5 2789 aa2.21□□□□□ -2.06
NDEL1-212ENST00000582277 HIVEP1P15822 2718 aa2.2□□□□□ -2.06
NDEL1-212ENST00000582277 CFAP46Q8IYW2 2715 aa2.2□□□□□ -2.06
NDEL1-212ENST00000582277 COX6B2Q6YFQ2 88 aa2.2□□□□□ -2.06
NDEL1-212ENST00000582277 SMR3AQ99954 134 aa2.2□□□□□ -2.06
NDEL1-212ENST00000582277 ITPR3Q14573 2671 aa2.2□□□□□ -2.06
NDEL1-212ENST00000582277 UBR5O95071 2799 aaPredicted RBP2.2□□□□□ -2.06
NDEL1-212ENST00000582277 PTPN13Q12923 2485 aa2.19□□□□□ -2.06
NDEL1-212ENST00000582277 SPTBN4Q9H254 2564 aa2.19□□□□□ -2.06
NDEL1-212ENST00000582277 UNC79Q9P2D8 2635 aa2.19□□□□□ -2.06
NDEL1-212ENST00000582277 CRIPTQ9P021 101 aa2.19□□□□□ -2.06
NDEL1-212ENST00000582277 APLNQ9ULZ1 77 aa2.19□□□□□ -2.06
NDEL1-212ENST00000582277 ACACBO00763 2458 aa2.19□□□□□ -2.06
NDEL1-212ENST00000582277 PKD1L2Q7Z442 2459 aa2.18□□□□□ -2.06
NDEL1-212ENST00000582277 TENM2Q9NT68 2774 aa2.18□□□□□ -2.06
NDEL1-212ENST00000582277 FLNCQ14315 2725 aa2.18□□□□□ -2.06
NDEL1-212ENST00000582277 CHD8Q9HCK8 2581 aa2.17□□□□□ -2.06
NDEL1-212ENST00000582277 SONP18583 2426 aaKnown RBP2.17□□□□□ -2.06
NDEL1-212ENST00000582277 CCDC168Q8NDH2 2452 aa2.17□□□□□ -2.06
NDEL1-212ENST00000582277 OTOGQ6ZRI0 2925 aa2.17□□□□□ -2.06
NDEL1-212ENST00000582277 FLNAP21333 2647 aaKnown RBP2.17□□□□□ -2.06
NDEL1-212ENST00000582277 CUBNO60494 3623 aa2.16□□□□□ -2.06
NDEL1-212ENST00000582277 MYO18BQ8IUG5 2567 aa2.16□□□□□ -2.06
NDEL1-212ENST00000582277 MTORP42345 2549 aa2.16□□□□□ -2.06
NDEL1-212ENST00000582277 ANK2Q01484 3957 aa2.16□□□□□ -2.06
NDEL1-212ENST00000582277 PIEZO1Q92508 2521 aa2.15□□□□□ -2.07
NDEL1-212ENST00000582277 ABCA12Q86UK0 2595 aa2.15□□□□□ -2.07
NDEL1-212ENST00000582277 SETD2Q9BYW2 2564 aaPredicted RBP2.15□□□□□ -2.07
NDEL1-212ENST00000582277 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms