RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 WFDC13Q8IUB5 93 aa8.5□□□□□ -1.05
MKS1-211ENST00000581761 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
MKS1-211ENST00000581761 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
MKS1-211ENST00000581761 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
MKS1-211ENST00000581761 OCR1Q9BZK8 76 aa8.46□□□□□ -1.06
MKS1-211ENST00000581761 Q5XG85 94 aa8.45□□□□□ -1.06
MKS1-211ENST00000581761 CASC2Q6XLA1 102 aa8.45□□□□□ -1.06
MKS1-211ENST00000581761 LIMD2Q9BT23 127 aa8.45□□□□□ -1.06
MKS1-211ENST00000581761 MMP24-AS1A0A0U1RRL7 71 aa8.44□□□□□ -1.06
MKS1-211ENST00000581761 A0A1B0GVX0 72 aa8.44□□□□□ -1.06
MKS1-211ENST00000581761 J3QL48 77 aa8.44□□□□□ -1.06
MKS1-211ENST00000581761 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
MKS1-211ENST00000581761 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
MKS1-211ENST00000581761 C8orf17Q9NRJ1 99 aa8.43□□□□□ -1.06
MKS1-211ENST00000581761 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
MKS1-211ENST00000581761 LRP1Q07954 4544 aaKnown RBP8.42□□□□□ -1.06
MKS1-211ENST00000581761 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
MKS1-211ENST00000581761 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.06
MKS1-211ENST00000581761 SPINK1P00995 79 aa8.4□□□□□ -1.06
MKS1-211ENST00000581761 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
MKS1-211ENST00000581761 C1orf195Q5TG92 126 aa8.39□□□□□ -1.07
MKS1-211ENST00000581761 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
MKS1-211ENST00000581761 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
MKS1-211ENST00000581761 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
MKS1-211ENST00000581761 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
MKS1-211ENST00000581761 CYSTM1Q9H1C7 97 aa8.35□□□□□ -1.07
MKS1-211ENST00000581761 SNURFQ9Y675 71 aa8.35□□□□□ -1.07
MKS1-211ENST00000581761 C8orf87E5RJ46 101 aa8.34□□□□□ -1.07
MKS1-211ENST00000581761 TMEM254Q8TBM7 123 aa8.34□□□□□ -1.07
MKS1-211ENST00000581761 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
MKS1-211ENST00000581761 OXTP01178 125 aa8.32□□□□□ -1.08
MKS1-211ENST00000581761 KLKP1Q107X0 134 aa8.32□□□□□ -1.08
MKS1-211ENST00000581761 MRPL34Q9BQ48 92 aaKnown RBP8.32□□□□□ -1.08
MKS1-211ENST00000581761 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
MKS1-211ENST00000581761 C5orf47Q569G3 176 aa8.3□□□□□ -1.08
MKS1-211ENST00000581761 SVIPQ8NHG7 77 aa8.3□□□□□ -1.08
MKS1-211ENST00000581761 NDUFS5O43920 106 aa8.29□□□□□ -1.08
MKS1-211ENST00000581761 MP68P56378 58 aa8.27□□□□□ -1.09
MKS1-211ENST00000581761 LINC00313P59037 77 aa8.27□□□□□ -1.09
MKS1-211ENST00000581761 HMCN2Q8NDA2 5059 aa8.27□□□□□ -1.09
MKS1-211ENST00000581761 H0Y9P7 68 aa8.26□□□□□ -1.09
MKS1-211ENST00000581761 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
MKS1-211ENST00000581761 TMEM258P61165 79 aa8.26□□□□□ -1.09
MKS1-211ENST00000581761 TP53AIP1Q9HCN2 124 aa8.26□□□□□ -1.09
MKS1-211ENST00000581761 NDUFC1O43677 76 aa8.25□□□□□ -1.09
MKS1-211ENST00000581761 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
MKS1-211ENST00000581761 H7BZZ5 65 aa8.23□□□□□ -1.09
MKS1-211ENST00000581761 TNXBP22105 4242 aa8.23□□□□□ -1.09
MKS1-211ENST00000581761 ZCCHC13Q8WW36 166 aaKnown RBP8.22□□□□□ -1.09
MKS1-211ENST00000581761 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
MKS1-211ENST00000581761 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
MKS1-211ENST00000581761 LINC00208Q96KT6 92 aa8.21□□□□□ -1.1
MKS1-211ENST00000581761 H3BPC8 53 aa8.2□□□□□ -1.1
MKS1-211ENST00000581761 FAM236DA0A1B0GTK5 79 aa8.18□□□□□ -1.1
MKS1-211ENST00000581761 FAM236CP0DP71 79 aa8.18□□□□□ -1.1
MKS1-211ENST00000581761 KRTAP16-1A8MUX0 517 aa8.17□□□□□ -1.1
MKS1-211ENST00000581761 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
MKS1-211ENST00000581761 RETNLBQ9BQ08 111 aa8.15□□□□□ -1.1
MKS1-211ENST00000581761 Q8N9P0 234 aaPredicted RBP8.14□□□□□ -1.11
MKS1-211ENST00000581761 UBR4Q5T4S7 5183 aa8.13□□□□□ -1.11
MKS1-211ENST00000581761 ATP5EP56381 51 aaPredicted RBP8.11□□□□□ -1.11
MKS1-211ENST00000581761 Q5W150 140 aa8.1□□□□□ -1.11
MKS1-211ENST00000581761 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
MKS1-211ENST00000581761 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
MKS1-211ENST00000581761 LOC101927531A0A1B0GV80 90 aa8.06□□□□□ -1.12
MKS1-211ENST00000581761 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
MKS1-211ENST00000581761 LRP2P98164 4655 aa8.02□□□□□ -1.13
MKS1-211ENST00000581761 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.13
MKS1-211ENST00000581761 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
MKS1-211ENST00000581761 RPS28P62857 69 aaKnown RBP8□□□□□ -1.13
MKS1-211ENST00000581761 PRR4Q16378 134 aa8□□□□□ -1.13
MKS1-211ENST00000581761 A8MUU9 505 aa7.99□□□□□ -1.13
MKS1-211ENST00000581761 SPANXA2-OT1Q8N9U9 137 aa7.99□□□□□ -1.13
MKS1-211ENST00000581761 C20orf166-AS1Q96NR2 134 aa7.99□□□□□ -1.13
MKS1-211ENST00000581761 CYP4F30PQ9H0H9 118 aa7.98□□□□□ -1.13
MKS1-211ENST00000581761 IGKV2-30P06310 120 aa7.97□□□□□ -1.13
MKS1-211ENST00000581761 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.14
MKS1-211ENST00000581761 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
MKS1-211ENST00000581761 RNF213Q63HN8 5207 aa7.93□□□□□ -1.14
MKS1-211ENST00000581761 Q75L30 129 aa7.9□□□□□ -1.14
MKS1-211ENST00000581761 HRES1P13985 223 aa7.88□□□□□ -1.15
MKS1-211ENST00000581761 C7orf65Q6ZTY9 151 aa7.86□□□□□ -1.15
MKS1-211ENST00000581761 LPAP08519 4548 aa7.83□□□□□ -1.16
MKS1-211ENST00000581761 XP32Q5T750 250 aa7.83□□□□□ -1.16
MKS1-211ENST00000581761 RPL37P61927 97 aaKnown RBP7.82□□□□□ -1.16
MKS1-211ENST00000581761 SMIM26A0A096LP01 95 aa7.81□□□□□ -1.16
MKS1-211ENST00000581761 ATP11AUNQ6ZP68 121 aa7.8□□□□□ -1.16
MKS1-211ENST00000581761 COA5Q86WW8 74 aa7.79□□□□□ -1.16
MKS1-211ENST00000581761 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
MKS1-211ENST00000581761 SPINK7P58062 85 aa7.75□□□□□ -1.17
MKS1-211ENST00000581761 TPRXLQ17RH7 258 aa7.75□□□□□ -1.17
MKS1-211ENST00000581761 ACYP2P14621 99 aa7.74□□□□□ -1.17
MKS1-211ENST00000581761 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
MKS1-211ENST00000581761 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
MKS1-211ENST00000581761 CHKB-CPT1BH3BT56 60 aa7.66□□□□□ -1.18
MKS1-211ENST00000581761 A8MUN3 132 aa7.64□□□□□ -1.19
MKS1-211ENST00000581761 MUC2Q02817 5179 aa7.63□□□□□ -1.19
MKS1-211ENST00000581761 Q1T7F1 81 aa7.61□□□□□ -1.19
MKS1-211ENST00000581761 V9GYY9 64 aa7.59□□□□□ -1.19
MKS1-211ENST00000581761 COX6B2Q6YFQ2 88 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms