RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 KRTAP19-2Q3LHN2 52 aa12.59□□□□□ -0.39
LIMD2-207ENST00000579329 A0A1B0GW54 56 aa12.57□□□□□ -0.4
LIMD2-207ENST00000579329 LCE2CQ5TA81 110 aa12.57□□□□□ -0.4
LIMD2-207ENST00000579329 C14orf132Q9NPU4 83 aa12.57□□□□□ -0.4
LIMD2-207ENST00000579329 H3BT86 120 aa12.55□□□□□ -0.4
LIMD2-207ENST00000579329 IGHV6-1A0A0B4J1U7 121 aa12.54□□□□□ -0.4
LIMD2-207ENST00000579329 J3KT08 172 aa12.54□□□□□ -0.4
LIMD2-207ENST00000579329 KRTAP16-1A8MUX0 517 aa12.53□□□□□ -0.4
LIMD2-207ENST00000579329 A0A1B0GVX0 72 aa12.51□□□□□ -0.41
LIMD2-207ENST00000579329 NOTCH2NLQ7Z3S9 236 aa12.51□□□□□ -0.41
LIMD2-207ENST00000579329 C8orf87E5RJ46 101 aa12.5□□□□□ -0.41
LIMD2-207ENST00000579329 MTURNQ8N3F0 131 aa12.48□□□□□ -0.41
LIMD2-207ENST00000579329 SPCS1Q9Y6A9 102 aa12.47□□□□□ -0.41
LIMD2-207ENST00000579329 COL5A1-AS1Q5SY13 56 aa12.46□□□□□ -0.41
LIMD2-207ENST00000579329 COX6B2Q6YFQ2 88 aa12.45□□□□□ -0.42
LIMD2-207ENST00000579329 NDUFB1O75438 58 aa12.43□□□□□ -0.42
LIMD2-207ENST00000579329 MT1HP80294 61 aa12.43□□□□□ -0.42
LIMD2-207ENST00000579329 A8MWP4 228 aa12.38□□□□□ -0.43
LIMD2-207ENST00000579329 NREPQ16612 68 aa12.38□□□□□ -0.43
LIMD2-207ENST00000579329 IGKV3D-7A0A0C4DH55 119 aa12.31□□□□□ -0.44
LIMD2-207ENST00000579329 C8orf17Q9NRJ1 99 aa12.31□□□□□ -0.44
LIMD2-207ENST00000579329 K7EP34 96 aa12.3□□□□□ -0.44
LIMD2-207ENST00000579329 SMCPP49901 116 aaPredicted RBP12.3□□□□□ -0.44
LIMD2-207ENST00000579329 PCP4L1A6NKN8 68 aa12.28□□□□□ -0.44
LIMD2-207ENST00000579329 PRR15Q8IV56 129 aa12.26□□□□□ -0.45
LIMD2-207ENST00000579329 M0R2T5 61 aa12.24□□□□□ -0.45
LIMD2-207ENST00000579329 Q8N9P0 234 aaPredicted RBP12.24□□□□□ -0.45
LIMD2-207ENST00000579329 PRO0461Q9UI25 63 aa12.24□□□□□ -0.45
LIMD2-207ENST00000579329 ZCCHC13Q8WW36 166 aaKnown RBP12.23□□□□□ -0.45
LIMD2-207ENST00000579329 Q6ZVQ6 151 aa12.2□□□□□ -0.46
LIMD2-207ENST00000579329 GTF2H5Q6ZYL4 71 aa12.19□□□□□ -0.46
LIMD2-207ENST00000579329 BPY2O14599 106 aa12.18□□□□□ -0.46
LIMD2-207ENST00000579329 MMP24-AS1A0A0U1RRL7 71 aa12.16□□□□□ -0.46
LIMD2-207ENST00000579329 K7EQZ3 153 aa12.16□□□□□ -0.46
LIMD2-207ENST00000579329 LORP23490 312 aaPredicted RBP12.16□□□□□ -0.46
LIMD2-207ENST00000579329 KRTAP10-6P60371 365 aaPredicted RBP12.16□□□□□ -0.46
LIMD2-207ENST00000579329 FLGP20930 4061 aaPredicted RBP12.14□□□□□ -0.47
LIMD2-207ENST00000579329 TMEM254Q8TBM7 123 aa12.14□□□□□ -0.47
LIMD2-207ENST00000579329 HRES1P13985 223 aa12.13□□□□□ -0.47
LIMD2-207ENST00000579329 MRPL34Q9BQ48 92 aaKnown RBP12.12□□□□□ -0.47
LIMD2-207ENST00000579329 RBM12B-AS1Q9P1G2 102 aa12.11□□□□□ -0.47
LIMD2-207ENST00000579329 FAM236DA0A1B0GTK5 79 aa12.1□□□□□ -0.47
LIMD2-207ENST00000579329 FAM236CP0DP71 79 aa12.1□□□□□ -0.47
LIMD2-207ENST00000579329 hDV103S1A0JD37 113 aa12.09□□□□□ -0.47
LIMD2-207ENST00000579329 MPLKIPQ8TAP9 179 aa12.09□□□□□ -0.47
LIMD2-207ENST00000579329 F8W1H4 67 aa12.07□□□□□ -0.48
LIMD2-207ENST00000579329 SPINK7P58062 85 aa12.06□□□□□ -0.48
LIMD2-207ENST00000579329 UBL5Q9BZL1 73 aa12.06□□□□□ -0.48
LIMD2-207ENST00000579329 LINC00846Q9NV44 126 aa12.05□□□□□ -0.48
LIMD2-207ENST00000579329 NDUFS5O43920 106 aa12.01□□□□□ -0.49
LIMD2-207ENST00000579329 Q8N9L7 120 aa12.01□□□□□ -0.49
LIMD2-207ENST00000579329 ETDBQ3ZM63 59 aa11.98□□□□□ -0.49
LIMD2-207ENST00000579329 WFDC13Q8IUB5 93 aa11.97□□□□□ -0.49
LIMD2-207ENST00000579329 CASC2Q6XLA1 102 aa11.95□□□□□ -0.5
LIMD2-207ENST00000579329 KRTAP9-7A8MTY7 169 aa11.88□□□□□ -0.51
LIMD2-207ENST00000579329 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
LIMD2-207ENST00000579329 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.85□□□□□ -0.51
LIMD2-207ENST00000579329 Q5W150 140 aa11.82□□□□□ -0.52
LIMD2-207ENST00000579329 CXCL6P80162 114 aa11.81□□□□□ -0.52
LIMD2-207ENST00000579329 KRTAP9-8Q9BYQ0 159 aa11.78□□□□□ -0.52
LIMD2-207ENST00000579329 IGKV2D-30A0A075B6S6 120 aa11.77□□□□□ -0.53
LIMD2-207ENST00000579329 IGKV2-30P06310 120 aa11.77□□□□□ -0.53
LIMD2-207ENST00000579329 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
LIMD2-207ENST00000579329 SSPOA2VEC9 5147 aa11.75□□□□□ -0.53
LIMD2-207ENST00000579329 ACYP1P07311 99 aa11.74□□□□□ -0.53
LIMD2-207ENST00000579329 USH2AO75445 5202 aa11.71□□□□□ -0.53
LIMD2-207ENST00000579329 FAM240AA0A1B0GVK7 77 aa11.68□□□□□ -0.54
LIMD2-207ENST00000579329 MT2AP02795 61 aa11.65□□□□□ -0.54
LIMD2-207ENST00000579329 TP53AIP1Q9HCN2 124 aa11.64□□□□□ -0.55
LIMD2-207ENST00000579329 H1FX-AS1Q4G0G2 97 aa11.62□□□□□ -0.55
LIMD2-207ENST00000579329 A0A1B0GV90 55 aa11.61□□□□□ -0.55
LIMD2-207ENST00000579329 ATP5EP2Q5VTU8 51 aa11.6□□□□□ -0.55
LIMD2-207ENST00000579329 MT1FP04733 61 aa11.55□□□□□ -0.56
LIMD2-207ENST00000579329 C4orf26Q17RF5 130 aa11.53□□□□□ -0.56
LIMD2-207ENST00000579329 FCGBPQ9Y6R7 5405 aaPredicted RBP11.53□□□□□ -0.56
LIMD2-207ENST00000579329 KRTAP10-10P60014 251 aa11.52□□□□□ -0.57
LIMD2-207ENST00000579329 HIST1H4AP62805 103 aaKnown RBP11.48□□□□□ -0.57
LIMD2-207ENST00000579329 LINC00643Q86TS7 51 aa11.46□□□□□ -0.57
LIMD2-207ENST00000579329 TRAV22A0A0B4J277 110 aa11.4□□□□□ -0.58
LIMD2-207ENST00000579329 KRTAP9-3Q9BYQ3 159 aa11.4□□□□□ -0.58
LIMD2-207ENST00000579329 C1orf64Q8NEQ6 169 aa11.37□□□□□ -0.59
LIMD2-207ENST00000579329 KRTAP19-1Q8IUB9 90 aa11.36□□□□□ -0.59
LIMD2-207ENST00000579329 KRTAP3-1Q9BYR8 98 aa11.35□□□□□ -0.59
LIMD2-207ENST00000579329 A0A087WVE0 104 aa11.34□□□□□ -0.59
LIMD2-207ENST00000579329 CYP4F30PQ9H0H9 118 aa11.34□□□□□ -0.59
LIMD2-207ENST00000579329 LOC101927531A0A1B0GV80 90 aa11.33□□□□□ -0.6
LIMD2-207ENST00000579329 UQCRQO14949 82 aa11.33□□□□□ -0.6
LIMD2-207ENST00000579329 MACF1Q9UPN3 7388 aaKnown RBP11.33□□□□□ -0.6
LIMD2-207ENST00000579329 J3QR89 54 aa11.32□□□□□ -0.6
LIMD2-207ENST00000579329 LCE2BO14633 110 aa11.3□□□□□ -0.6
LIMD2-207ENST00000579329 SYNE2Q8WXH0 6885 aaKnown RBP11.29□□□□□ -0.6
LIMD2-207ENST00000579329 S4R3F8 94 aa11.27□□□□□ -0.61
LIMD2-207ENST00000579329 ATOX1O00244 68 aa11.26□□□□□ -0.61
LIMD2-207ENST00000579329 H0Y9P7 68 aa11.25□□□□□ -0.61
LIMD2-207ENST00000579329 C5orf47Q569G3 176 aa11.23□□□□□ -0.61
LIMD2-207ENST00000579329 LCA10Q71F78 164 aa11.18□□□□□ -0.62
LIMD2-207ENST00000579329 CSAG1Q6PB30 78 aa11.16□□□□□ -0.62
LIMD2-207ENST00000579329 OCR1Q9BZK8 76 aa11.12□□□□□ -0.63
LIMD2-207ENST00000579329 MP68P56378 58 aa11.08□□□□□ -0.64
LIMD2-207ENST00000579329 LINC00208Q96KT6 92 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms