RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 LINC00313P59037 77 aa12.66□□□□□ -0.38
ERBB2-209ENST00000578709 C20orf166-AS1Q96NR2 134 aa12.65□□□□□ -0.38
ERBB2-209ENST00000578709 A0A0U1RQV1 116 aa12.64□□□□□ -0.39
ERBB2-209ENST00000578709 IGHV6-1A0A0B4J1U7 121 aa12.63□□□□□ -0.39
ERBB2-209ENST00000578709 A0A1B0GVX0 72 aa12.63□□□□□ -0.39
ERBB2-209ENST00000578709 F8W1H4 67 aa12.63□□□□□ -0.39
ERBB2-209ENST00000578709 A8MUU9 505 aa12.62□□□□□ -0.39
ERBB2-209ENST00000578709 NREPQ16612 68 aa12.62□□□□□ -0.39
ERBB2-209ENST00000578709 NOTCH2NLQ7Z3S9 236 aa12.62□□□□□ -0.39
ERBB2-209ENST00000578709 KRTAP16-1A8MUX0 517 aa12.6□□□□□ -0.39
ERBB2-209ENST00000578709 C8orf87E5RJ46 101 aa12.59□□□□□ -0.39
ERBB2-209ENST00000578709 A8MWP4 228 aa12.57□□□□□ -0.4
ERBB2-209ENST00000578709 FAT4Q6V0I7 4981 aa12.56□□□□□ -0.4
ERBB2-209ENST00000578709 NDUFB1O75438 58 aa12.56□□□□□ -0.4
ERBB2-209ENST00000578709 ATP11AUNQ6ZP68 121 aa12.56□□□□□ -0.4
ERBB2-209ENST00000578709 IGKV3D-7A0A0C4DH55 119 aa12.52□□□□□ -0.41
ERBB2-209ENST00000578709 ETDBQ3ZM63 59 aa12.51□□□□□ -0.41
ERBB2-209ENST00000578709 Q6ZVQ6 151 aa12.48□□□□□ -0.41
ERBB2-209ENST00000578709 PRR15Q8IV56 129 aa12.48□□□□□ -0.41
ERBB2-209ENST00000578709 C8orf17Q9NRJ1 99 aa12.45□□□□□ -0.42
ERBB2-209ENST00000578709 BPY2O14599 106 aa12.44□□□□□ -0.42
ERBB2-209ENST00000578709 LINC00846Q9NV44 126 aa12.44□□□□□ -0.42
ERBB2-209ENST00000578709 K7EQZ3 153 aa12.39□□□□□ -0.43
ERBB2-209ENST00000578709 UBL5Q9BZL1 73 aa12.39□□□□□ -0.43
ERBB2-209ENST00000578709 A0A1B0GV90 55 aa12.37□□□□□ -0.43
ERBB2-209ENST00000578709 KRTAP19-2Q3LHN2 52 aa12.37□□□□□ -0.43
ERBB2-209ENST00000578709 Q8N9P0 234 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-209ENST00000578709 LCE2AQ5TA79 106 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-209ENST00000578709 MMP24-AS1A0A0U1RRL7 71 aa12.35□□□□□ -0.43
ERBB2-209ENST00000578709 LCE2CQ5TA81 110 aa12.32□□□□□ -0.44
ERBB2-209ENST00000578709 TMEM254Q8TBM7 123 aa12.3□□□□□ -0.44
ERBB2-209ENST00000578709 hDV103S1A0JD37 113 aa12.27□□□□□ -0.45
ERBB2-209ENST00000578709 Q8N9L7 120 aa12.27□□□□□ -0.45
ERBB2-209ENST00000578709 ZCCHC13Q8WW36 166 aaKnown RBP12.27□□□□□ -0.45
ERBB2-209ENST00000578709 MRPL34Q9BQ48 92 aaKnown RBP12.26□□□□□ -0.45
ERBB2-209ENST00000578709 ACYP1P07311 99 aa12.22□□□□□ -0.45
ERBB2-209ENST00000578709 FAM240AA0A1B0GVK7 77 aa12.21□□□□□ -0.45
ERBB2-209ENST00000578709 CXCL6P80162 114 aa12.19□□□□□ -0.46
ERBB2-209ENST00000578709 CASC2Q6XLA1 102 aa12.16□□□□□ -0.46
ERBB2-209ENST00000578709 COX6B2Q6YFQ2 88 aa12.16□□□□□ -0.46
ERBB2-209ENST00000578709 WFDC13Q8IUB5 93 aa12.16□□□□□ -0.46
ERBB2-209ENST00000578709 MT1HP80294 61 aa12.13□□□□□ -0.47
ERBB2-209ENST00000578709 HCG22E2RYF7 251 aa12.11□□□□□ -0.47
ERBB2-209ENST00000578709 NDUFS5O43920 106 aa12.11□□□□□ -0.47
ERBB2-209ENST00000578709 HRES1P13985 223 aa12.09□□□□□ -0.47
ERBB2-209ENST00000578709 FLGP20930 4061 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-209ENST00000578709 SPINK7P58062 85 aa12.07□□□□□ -0.48
ERBB2-209ENST00000578709 MPLKIPQ8TAP9 179 aa12.06□□□□□ -0.48
ERBB2-209ENST00000578709 ATP5EP2Q5VTU8 51 aa12.03□□□□□ -0.48
ERBB2-209ENST00000578709 Q5W150 140 aa11.99□□□□□ -0.49
ERBB2-209ENST00000578709 RBM12B-AS1Q9P1G2 102 aa11.99□□□□□ -0.49
ERBB2-209ENST00000578709 LINC00643Q86TS7 51 aa11.94□□□□□ -0.5
ERBB2-209ENST00000578709 J3QR89 54 aa11.92□□□□□ -0.5
ERBB2-209ENST00000578709 FAM236DA0A1B0GTK5 79 aa11.91□□□□□ -0.5
ERBB2-209ENST00000578709 FAM236CP0DP71 79 aa11.91□□□□□ -0.5
ERBB2-209ENST00000578709 M0R2T5 61 aa11.89□□□□□ -0.51
ERBB2-209ENST00000578709 TP53AIP1Q9HCN2 124 aa11.87□□□□□ -0.51
ERBB2-209ENST00000578709 HIST1H4AP62805 103 aaKnown RBP11.85□□□□□ -0.51
ERBB2-209ENST00000578709 C7orf65Q6ZTY9 151 aa11.85□□□□□ -0.51
ERBB2-209ENST00000578709 IGKV2D-30A0A075B6S6 120 aa11.84□□□□□ -0.51
ERBB2-209ENST00000578709 IGKV2-30P06310 120 aa11.84□□□□□ -0.51
ERBB2-209ENST00000578709 KRTAP10-6P60371 365 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-209ENST00000578709 LORP23490 312 aaPredicted RBP11.81□□□□□ -0.52
ERBB2-209ENST00000578709 A0A087WVE0 104 aa11.74□□□□□ -0.53
ERBB2-209ENST00000578709 TRAV22A0A0B4J277 110 aa11.65□□□□□ -0.54
ERBB2-209ENST00000578709 K7ERU9 68 aa11.65□□□□□ -0.54
ERBB2-209ENST00000578709 UQCRQO14949 82 aa11.64□□□□□ -0.55
ERBB2-209ENST00000578709 KRTAP9-2Q9BYQ4 174 aa11.64□□□□□ -0.55
ERBB2-209ENST00000578709 H1FX-AS1Q4G0G2 97 aa11.61□□□□□ -0.55
ERBB2-209ENST00000578709 C4orf26Q17RF5 130 aa11.6□□□□□ -0.55
ERBB2-209ENST00000578709 LCE2DQ5TA82 110 aaPredicted RBP11.58□□□□□ -0.56
ERBB2-209ENST00000578709 CYP4F30PQ9H0H9 118 aa11.56□□□□□ -0.56
ERBB2-209ENST00000578709 LOC101927531A0A1B0GV80 90 aa11.55□□□□□ -0.56
ERBB2-209ENST00000578709 KRTAP9-8Q9BYQ0 159 aa11.55□□□□□ -0.56
ERBB2-209ENST00000578709 ATOX1O00244 68 aa11.53□□□□□ -0.56
ERBB2-209ENST00000578709 OCR1Q9BZK8 76 aa11.53□□□□□ -0.56
ERBB2-209ENST00000578709 H0Y9P7 68 aa11.52□□□□□ -0.57
ERBB2-209ENST00000578709 IMUPQ9GZP8 106 aa11.5□□□□□ -0.57
ERBB2-209ENST00000578709 MT-ATP8P03928 68 aa11.48□□□□□ -0.57
ERBB2-209ENST00000578709 KRTAP3-1Q9BYR8 98 aa11.47□□□□□ -0.57
ERBB2-209ENST00000578709 C1orf64Q8NEQ6 169 aa11.45□□□□□ -0.58
ERBB2-209ENST00000578709 MT2AP02795 61 aa11.42□□□□□ -0.58
ERBB2-209ENST00000578709 SCGB1A1P11684 91 aa11.4□□□□□ -0.58
ERBB2-209ENST00000578709 MP68P56378 58 aa11.38□□□□□ -0.59
ERBB2-209ENST00000578709 C5orf47Q569G3 176 aa11.38□□□□□ -0.59
ERBB2-209ENST00000578709 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
ERBB2-209ENST00000578709 MT1FP04733 61 aa11.33□□□□□ -0.6
ERBB2-209ENST00000578709 H3BPC8 53 aa11.3□□□□□ -0.6
ERBB2-209ENST00000578709 S4R3F8 94 aa11.29□□□□□ -0.6
ERBB2-209ENST00000578709 FAM236AA0A1B0GUQ0 79 aa11.27□□□□□ -0.61
ERBB2-209ENST00000578709 FAM236BA0A1B0GV22 79 aa11.27□□□□□ -0.61
ERBB2-209ENST00000578709 KRTAP10-10P60014 251 aa11.27□□□□□ -0.61
ERBB2-209ENST00000578709 KLKP1Q107X0 134 aa11.26□□□□□ -0.61
ERBB2-209ENST00000578709 LCA10Q71F78 164 aa11.23□□□□□ -0.61
ERBB2-209ENST00000578709 SMIM20Q8N5G0 67 aa11.23□□□□□ -0.61
ERBB2-209ENST00000578709 TRAV7A0A075B6U4 112 aa11.19□□□□□ -0.62
ERBB2-209ENST00000578709 KRTAP9-3Q9BYQ3 159 aa11.18□□□□□ -0.62
ERBB2-209ENST00000578709 CSAG1Q6PB30 78 aa11.16□□□□□ -0.62
ERBB2-209ENST00000578709 A8MUN3 132 aa11.15□□□□□ -0.62
ERBB2-209ENST00000578709 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 296.7 ms