RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MT1HL1P0DM35 61 aa4.65□□□□□ -1.66
COPS3-215ENST00000578317 Q6ZQT0 140 aa4.64□□□□□ -1.67
COPS3-215ENST00000578317 SPINK1P00995 79 aa4.64□□□□□ -1.67
COPS3-215ENST00000578317 C14orf132Q9NPU4 83 aa4.64□□□□□ -1.67
COPS3-215ENST00000578317 A0A1W2PNM2 257 aa4.63□□□□□ -1.67
COPS3-215ENST00000578317 CCKP06307 115 aa4.63□□□□□ -1.67
COPS3-215ENST00000578317 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
COPS3-215ENST00000578317 A0A0G2JQZ4 141 aa4.62□□□□□ -1.67
COPS3-215ENST00000578317 A0A1B0GV72 72 aa4.62□□□□□ -1.67
COPS3-215ENST00000578317 Q5XG85 94 aa4.62□□□□□ -1.67
COPS3-215ENST00000578317 LINC00304Q8N9R0 145 aa4.62□□□□□ -1.67
COPS3-215ENST00000578317 HERC1Q15751 4861 aa4.61□□□□□ -1.67
COPS3-215ENST00000578317 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
COPS3-215ENST00000578317 DMBT1Q9UGM3 2413 aaPredicted RBP4.6□□□□□ -1.67
COPS3-215ENST00000578317 ASB16-AS1Q495Z4 193 aa4.59□□□□□ -1.67
COPS3-215ENST00000578317 LIMD2Q9BT23 127 aa4.58□□□□□ -1.68
COPS3-215ENST00000578317 A0A087WSZ3 146 aa4.57□□□□□ -1.68
COPS3-215ENST00000578317 FAM240AA0A1B0GVK7 77 aa4.57□□□□□ -1.68
COPS3-215ENST00000578317 ACYP1P07311 99 aa4.57□□□□□ -1.68
COPS3-215ENST00000578317 HRCT1Q6UXD1 115 aa4.57□□□□□ -1.68
COPS3-215ENST00000578317 VPS25Q9BRG1 176 aa4.57□□□□□ -1.68
COPS3-215ENST00000578317 SS18L2Q9UHA2 77 aa4.57□□□□□ -1.68
COPS3-215ENST00000578317 J3QR89 54 aa4.57□□□□□ -1.68
COPS3-215ENST00000578317 LINC00846Q9NV44 126 aa4.54□□□□□ -1.68
COPS3-215ENST00000578317 NREPQ16612 68 aa4.54□□□□□ -1.68
COPS3-215ENST00000578317 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
COPS3-215ENST00000578317 C1orf195Q5TG92 126 aa4.53□□□□□ -1.68
COPS3-215ENST00000578317 K7ERU9 68 aa4.52□□□□□ -1.69
COPS3-215ENST00000578317 UBL5Q9BZL1 73 aa4.52□□□□□ -1.69
COPS3-215ENST00000578317 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
COPS3-215ENST00000578317 Q96NJ1 140 aa4.51□□□□□ -1.69
COPS3-215ENST00000578317 J3KT08 172 aa4.5□□□□□ -1.69
COPS3-215ENST00000578317 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
COPS3-215ENST00000578317 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
COPS3-215ENST00000578317 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
COPS3-215ENST00000578317 LINC00643Q86TS7 51 aa4.47□□□□□ -1.69
COPS3-215ENST00000578317 SIGMAR1Q99720 223 aa4.47□□□□□ -1.69
COPS3-215ENST00000578317 BPY2O14599 106 aa4.46□□□□□ -1.69
COPS3-215ENST00000578317 IGKV4-1P06312 121 aa4.46□□□□□ -1.69
COPS3-215ENST00000578317 CXCL6P80162 114 aa4.46□□□□□ -1.69
COPS3-215ENST00000578317 DEFB116Q30KQ4 102 aa4.46□□□□□ -1.69
COPS3-215ENST00000578317 IGLV7-46A0A075B6I9 117 aa4.46□□□□□ -1.7
COPS3-215ENST00000578317 A8MWP4 228 aa4.46□□□□□ -1.7
COPS3-215ENST00000578317 DSCR10P59022 87 aa4.46□□□□□ -1.7
COPS3-215ENST00000578317 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
COPS3-215ENST00000578317 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
COPS3-215ENST00000578317 NDUFB1O75438 58 aa4.44□□□□□ -1.7
COPS3-215ENST00000578317 ATP5EP2Q5VTU8 51 aa4.44□□□□□ -1.7
COPS3-215ENST00000578317 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
COPS3-215ENST00000578317 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
COPS3-215ENST00000578317 PRR15Q8IV56 129 aa4.43□□□□□ -1.7
COPS3-215ENST00000578317 A0A1B0GVX0 72 aa4.43□□□□□ -1.7
COPS3-215ENST00000578317 PRR4Q16378 134 aa4.43□□□□□ -1.7
COPS3-215ENST00000578317 LPAP08519 4548 aa4.42□□□□□ -1.7
COPS3-215ENST00000578317 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
COPS3-215ENST00000578317 C8orf87E5RJ46 101 aa4.4□□□□□ -1.7
COPS3-215ENST00000578317 K7EQZ3 153 aa4.4□□□□□ -1.7
COPS3-215ENST00000578317 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.7
COPS3-215ENST00000578317 LRP2P98164 4655 aa4.4□□□□□ -1.71
COPS3-215ENST00000578317 LINC00313P59037 77 aa4.39□□□□□ -1.71
COPS3-215ENST00000578317 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
COPS3-215ENST00000578317 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
COPS3-215ENST00000578317 IGHV6-1A0A0B4J1U7 121 aa4.39□□□□□ -1.71
COPS3-215ENST00000578317 Q8N9L7 120 aa4.38□□□□□ -1.71
COPS3-215ENST00000578317 C8orf17Q9NRJ1 99 aa4.38□□□□□ -1.71
COPS3-215ENST00000578317 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
COPS3-215ENST00000578317 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
COPS3-215ENST00000578317 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
COPS3-215ENST00000578317 hDV103S1A0JD37 113 aa4.35□□□□□ -1.71
COPS3-215ENST00000578317 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
COPS3-215ENST00000578317 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
COPS3-215ENST00000578317 HCG22E2RYF7 251 aa4.34□□□□□ -1.71
COPS3-215ENST00000578317 TMEM254Q8TBM7 123 aa4.34□□□□□ -1.71
COPS3-215ENST00000578317 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
COPS3-215ENST00000578317 A8MUU9 505 aa4.33□□□□□ -1.72
COPS3-215ENST00000578317 MRPL34Q9BQ48 92 aaKnown RBP4.33□□□□□ -1.72
COPS3-215ENST00000578317 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
COPS3-215ENST00000578317 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
COPS3-215ENST00000578317 A0A087WVE0 104 aa4.32□□□□□ -1.72
COPS3-215ENST00000578317 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
COPS3-215ENST00000578317 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
COPS3-215ENST00000578317 UBR4Q5T4S7 5183 aa4.31□□□□□ -1.72
COPS3-215ENST00000578317 SEC61GP60059 68 aa4.3□□□□□ -1.72
COPS3-215ENST00000578317 RPL37P61927 97 aaKnown RBP4.3□□□□□ -1.72
COPS3-215ENST00000578317 WFDC13Q8IUB5 93 aa4.3□□□□□ -1.72
COPS3-215ENST00000578317 TP53AIP1Q9HCN2 124 aa4.28□□□□□ -1.72
COPS3-215ENST00000578317 ATP11AUNQ6ZP68 121 aa4.26□□□□□ -1.73
COPS3-215ENST00000578317 NDUFS5O43920 106 aa4.24□□□□□ -1.73
COPS3-215ENST00000578317 SCGB1A1P11684 91 aa4.24□□□□□ -1.73
COPS3-215ENST00000578317 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
COPS3-215ENST00000578317 MUC2Q02817 5179 aa4.24□□□□□ -1.73
COPS3-215ENST00000578317 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
COPS3-215ENST00000578317 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
COPS3-215ENST00000578317 UQCRQO14949 82 aa4.23□□□□□ -1.73
COPS3-215ENST00000578317 SMIM20Q8N5G0 67 aa4.23□□□□□ -1.73
COPS3-215ENST00000578317 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
COPS3-215ENST00000578317 PCOTHQ58A44 107 aa4.22□□□□□ -1.73
COPS3-215ENST00000578317 Q5W150 140 aa4.22□□□□□ -1.73
COPS3-215ENST00000578317 ATOX1O00244 68 aa4.21□□□□□ -1.74
COPS3-215ENST00000578317 TRAV7A0A075B6U4 112 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms