RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 C14orf132Q9NPU4 83 aa12.32□□□□□ -0.44
SNF8-217ENST00000576353 H3BT86 120 aa12.29□□□□□ -0.44
SNF8-217ENST00000576353 KRTAP16-1A8MUX0 517 aa12.28□□□□□ -0.44
SNF8-217ENST00000576353 NOTCH2NLQ7Z3S9 236 aa12.28□□□□□ -0.44
SNF8-217ENST00000576353 A0A1B0GVX0 72 aa12.27□□□□□ -0.45
SNF8-217ENST00000576353 C8orf87E5RJ46 101 aa12.27□□□□□ -0.45
SNF8-217ENST00000576353 COX6B2Q6YFQ2 88 aa12.24□□□□□ -0.45
SNF8-217ENST00000576353 NDUFB1O75438 58 aa12.22□□□□□ -0.45
SNF8-217ENST00000576353 COL5A1-AS1Q5SY13 56 aa12.22□□□□□ -0.45
SNF8-217ENST00000576353 MT1HP80294 61 aa12.21□□□□□ -0.45
SNF8-217ENST00000576353 MTURNQ8N3F0 131 aa12.21□□□□□ -0.45
SNF8-217ENST00000576353 SPCS1Q9Y6A9 102 aa12.21□□□□□ -0.45
SNF8-217ENST00000576353 NREPQ16612 68 aa12.17□□□□□ -0.46
SNF8-217ENST00000576353 A8MWP4 228 aa12.15□□□□□ -0.46
SNF8-217ENST00000576353 KRTAP9-2Q9BYQ4 174 aa12.09□□□□□ -0.47
SNF8-217ENST00000576353 IGKV3D-7A0A0C4DH55 119 aa12.08□□□□□ -0.48
SNF8-217ENST00000576353 C8orf17Q9NRJ1 99 aa12.07□□□□□ -0.48
SNF8-217ENST00000576353 M0R2T5 61 aa12.05□□□□□ -0.48
SNF8-217ENST00000576353 SMCPP49901 116 aaPredicted RBP12.04□□□□□ -0.48
SNF8-217ENST00000576353 PRR15Q8IV56 129 aa12.04□□□□□ -0.48
SNF8-217ENST00000576353 K7EP34 96 aa12.03□□□□□ -0.48
SNF8-217ENST00000576353 Q8N9P0 234 aaPredicted RBP12.03□□□□□ -0.48
SNF8-217ENST00000576353 PCP4L1A6NKN8 68 aa12.01□□□□□ -0.49
SNF8-217ENST00000576353 ZCCHC13Q8WW36 166 aaKnown RBP12□□□□□ -0.49
SNF8-217ENST00000576353 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
SNF8-217ENST00000576353 Q6ZVQ6 151 aa11.98□□□□□ -0.49
SNF8-217ENST00000576353 BPY2O14599 106 aa11.96□□□□□ -0.49
SNF8-217ENST00000576353 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
SNF8-217ENST00000576353 GTF2H5Q6ZYL4 71 aa11.95□□□□□ -0.5
SNF8-217ENST00000576353 K7EQZ3 153 aa11.92□□□□□ -0.5
SNF8-217ENST00000576353 LORP23490 312 aaPredicted RBP11.92□□□□□ -0.5
SNF8-217ENST00000576353 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
SNF8-217ENST00000576353 TMEM254Q8TBM7 123 aa11.91□□□□□ -0.5
SNF8-217ENST00000576353 RBM12B-AS1Q9P1G2 102 aa11.91□□□□□ -0.5
SNF8-217ENST00000576353 HRES1P13985 223 aa11.9□□□□□ -0.5
SNF8-217ENST00000576353 MRPL34Q9BQ48 92 aaKnown RBP11.89□□□□□ -0.51
SNF8-217ENST00000576353 FAM236DA0A1B0GTK5 79 aa11.88□□□□□ -0.51
SNF8-217ENST00000576353 FAM236CP0DP71 79 aa11.88□□□□□ -0.51
SNF8-217ENST00000576353 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
SNF8-217ENST00000576353 FLGP20930 4061 aaPredicted RBP11.87□□□□□ -0.51
SNF8-217ENST00000576353 hDV103S1A0JD37 113 aa11.87□□□□□ -0.51
SNF8-217ENST00000576353 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
SNF8-217ENST00000576353 SPINK7P58062 85 aa11.86□□□□□ -0.51
SNF8-217ENST00000576353 F8W1H4 67 aa11.85□□□□□ -0.51
SNF8-217ENST00000576353 UBL5Q9BZL1 73 aa11.84□□□□□ -0.51
SNF8-217ENST00000576353 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
SNF8-217ENST00000576353 NDUFS5O43920 106 aa11.79□□□□□ -0.52
SNF8-217ENST00000576353 Q8N9L7 120 aa11.77□□□□□ -0.53
SNF8-217ENST00000576353 ETDBQ3ZM63 59 aa11.74□□□□□ -0.53
SNF8-217ENST00000576353 CASC2Q6XLA1 102 aa11.73□□□□□ -0.53
SNF8-217ENST00000576353 WFDC13Q8IUB5 93 aa11.73□□□□□ -0.53
SNF8-217ENST00000576353 HCG22E2RYF7 251 aa11.63□□□□□ -0.55
SNF8-217ENST00000576353 KRTAP9-6A0A140TA67 174 aa11.62□□□□□ -0.55
SNF8-217ENST00000576353 Q5W150 140 aa11.6□□□□□ -0.55
SNF8-217ENST00000576353 CXCL6P80162 114 aa11.59□□□□□ -0.55
SNF8-217ENST00000576353 KRTAP9-8Q9BYQ0 159 aa11.58□□□□□ -0.56
SNF8-217ENST00000576353 IGKV2D-30A0A075B6S6 120 aa11.56□□□□□ -0.56
SNF8-217ENST00000576353 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
SNF8-217ENST00000576353 C7orf65Q6ZTY9 151 aa11.55□□□□□ -0.56
SNF8-217ENST00000576353 ACYP1P07311 99 aa11.53□□□□□ -0.56
SNF8-217ENST00000576353 CRCT1Q9UGL9 99 aa11.47□□□□□ -0.57
SNF8-217ENST00000576353 FSIP2Q5CZC0 6907 aa11.46□□□□□ -0.57
SNF8-217ENST00000576353 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
SNF8-217ENST00000576353 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
SNF8-217ENST00000576353 MT2AP02795 61 aa11.43□□□□□ -0.58
SNF8-217ENST00000576353 H1FX-AS1Q4G0G2 97 aa11.43□□□□□ -0.58
SNF8-217ENST00000576353 ATP5EP2Q5VTU8 51 aa11.37□□□□□ -0.59
SNF8-217ENST00000576353 A0A1B0GV90 55 aa11.35□□□□□ -0.59
SNF8-217ENST00000576353 KRTAP10-10P60014 251 aa11.34□□□□□ -0.59
SNF8-217ENST00000576353 MT1FP04733 61 aa11.33□□□□□ -0.6
SNF8-217ENST00000576353 C4orf26Q17RF5 130 aa11.33□□□□□ -0.6
SNF8-217ENST00000576353 HIST1H4AP62805 103 aaKnown RBP11.27□□□□□ -0.61
SNF8-217ENST00000576353 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
SNF8-217ENST00000576353 KRTAP9-3Q9BYQ3 159 aa11.21□□□□□ -0.61
SNF8-217ENST00000576353 TRAV22A0A0B4J277 110 aa11.17□□□□□ -0.62
SNF8-217ENST00000576353 C1orf64Q8NEQ6 169 aa11.17□□□□□ -0.62
SNF8-217ENST00000576353 KRTAP3-1Q9BYR8 98 aa11.14□□□□□ -0.63
SNF8-217ENST00000576353 CYP4F30PQ9H0H9 118 aa11.14□□□□□ -0.63
SNF8-217ENST00000576353 UQCRQO14949 82 aa11.13□□□□□ -0.63
SNF8-217ENST00000576353 LOC101927531A0A1B0GV80 90 aa11.12□□□□□ -0.63
SNF8-217ENST00000576353 J3QR89 54 aa11.11□□□□□ -0.63
SNF8-217ENST00000576353 A0A087WVE0 104 aa11.09□□□□□ -0.63
SNF8-217ENST00000576353 LCE2BO14633 110 aa11.09□□□□□ -0.63
SNF8-217ENST00000576353 ATOX1O00244 68 aa11.06□□□□□ -0.64
SNF8-217ENST00000576353 S4R3F8 94 aa11.06□□□□□ -0.64
SNF8-217ENST00000576353 H0Y9P7 68 aa11.03□□□□□ -0.64
SNF8-217ENST00000576353 C5orf47Q569G3 176 aa11.03□□□□□ -0.64
SNF8-217ENST00000576353 USH2AO75445 5202 aa11.03□□□□□ -0.64
SNF8-217ENST00000576353 CSAG1Q6PB30 78 aa10.99□□□□□ -0.65
SNF8-217ENST00000576353 LCA10Q71F78 164 aa10.97□□□□□ -0.65
SNF8-217ENST00000576353 SSPOA2VEC9 5147 aa10.9□□□□□ -0.66
SNF8-217ENST00000576353 OCR1Q9BZK8 76 aa10.9□□□□□ -0.66
SNF8-217ENST00000576353 MP68P56378 58 aa10.88□□□□□ -0.67
SNF8-217ENST00000576353 LINC00208Q96KT6 92 aa10.87□□□□□ -0.67
SNF8-217ENST00000576353 FAM236AA0A1B0GUQ0 79 aa10.85□□□□□ -0.67
SNF8-217ENST00000576353 FAM236BA0A1B0GV22 79 aa10.85□□□□□ -0.67
SNF8-217ENST00000576353 KRTAP19-1Q8IUB9 90 aa10.84□□□□□ -0.67
SNF8-217ENST00000576353 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
SNF8-217ENST00000576353 SCGB1A1P11684 91 aa10.8□□□□□ -0.68
SNF8-217ENST00000576353 A8MUN3 132 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms