RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
LITAF-217ENST00000575426 NDUFB1O75438 58 aa8.13□□□□□ -1.11
LITAF-217ENST00000575426 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
LITAF-217ENST00000575426 KRTAP4-1Q9BYQ7 146 aa8.12□□□□□ -1.11
LITAF-217ENST00000575426 MUC2Q02817 5179 aa8.12□□□□□ -1.11
LITAF-217ENST00000575426 A0A1B0GVX0 72 aa8.11□□□□□ -1.11
LITAF-217ENST00000575426 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
LITAF-217ENST00000575426 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
LITAF-217ENST00000575426 PRO0461Q9UI25 63 aa8.1□□□□□ -1.11
LITAF-217ENST00000575426 A8MUU9 505 aa8.08□□□□□ -1.12
LITAF-217ENST00000575426 F8W1H4 67 aa8.07□□□□□ -1.12
LITAF-217ENST00000575426 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
LITAF-217ENST00000575426 A8MWP4 228 aa8.05□□□□□ -1.12
LITAF-217ENST00000575426 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
LITAF-217ENST00000575426 BPY2O14599 106 aa8.01□□□□□ -1.13
LITAF-217ENST00000575426 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
LITAF-217ENST00000575426 Q6ZVQ6 151 aa7.99□□□□□ -1.13
LITAF-217ENST00000575426 PRR15Q8IV56 129 aa7.99□□□□□ -1.13
LITAF-217ENST00000575426 C8orf17Q9NRJ1 99 aa7.99□□□□□ -1.13
LITAF-217ENST00000575426 ETDBQ3ZM63 59 aa7.98□□□□□ -1.13
LITAF-217ENST00000575426 UBL5Q9BZL1 73 aa7.98□□□□□ -1.13
LITAF-217ENST00000575426 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
LITAF-217ENST00000575426 K7EQZ3 153 aa7.93□□□□□ -1.14
LITAF-217ENST00000575426 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
LITAF-217ENST00000575426 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
LITAF-217ENST00000575426 COX6B2Q6YFQ2 88 aa7.91□□□□□ -1.14
LITAF-217ENST00000575426 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
LITAF-217ENST00000575426 TMEM254Q8TBM7 123 aa7.9□□□□□ -1.14
LITAF-217ENST00000575426 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
LITAF-217ENST00000575426 hDV103S1A0JD37 113 aa7.89□□□□□ -1.15
LITAF-217ENST00000575426 MRPL34Q9BQ48 92 aaKnown RBP7.89□□□□□ -1.15
LITAF-217ENST00000575426 ZCCHC13Q8WW36 166 aaKnown RBP7.88□□□□□ -1.15
LITAF-217ENST00000575426 A0A1B0GV90 55 aa7.86□□□□□ -1.15
LITAF-217ENST00000575426 KRTAP19-2Q3LHN2 52 aa7.86□□□□□ -1.15
LITAF-217ENST00000575426 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
LITAF-217ENST00000575426 NDUFS5O43920 106 aa7.85□□□□□ -1.15
LITAF-217ENST00000575426 Q8N9L7 120 aa7.85□□□□□ -1.15
LITAF-217ENST00000575426 ACYP1P07311 99 aa7.83□□□□□ -1.16
LITAF-217ENST00000575426 WFDC13Q8IUB5 93 aa7.83□□□□□ -1.16
LITAF-217ENST00000575426 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
LITAF-217ENST00000575426 CXCL6P80162 114 aa7.8□□□□□ -1.16
LITAF-217ENST00000575426 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
LITAF-217ENST00000575426 HCG22E2RYF7 251 aa7.77□□□□□ -1.17
LITAF-217ENST00000575426 SPINK7P58062 85 aa7.77□□□□□ -1.17
LITAF-217ENST00000575426 MT1HP80294 61 aa7.77□□□□□ -1.17
LITAF-217ENST00000575426 FAM236DA0A1B0GTK5 79 aa7.76□□□□□ -1.17
LITAF-217ENST00000575426 FAM240AA0A1B0GVK7 77 aa7.76□□□□□ -1.17
LITAF-217ENST00000575426 FAM236CP0DP71 79 aa7.76□□□□□ -1.17
LITAF-217ENST00000575426 M0R2T5 61 aa7.75□□□□□ -1.17
LITAF-217ENST00000575426 HRES1P13985 223 aa7.73□□□□□ -1.17
LITAF-217ENST00000575426 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
LITAF-217ENST00000575426 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
LITAF-217ENST00000575426 J3QR89 54 aa7.66□□□□□ -1.18
LITAF-217ENST00000575426 Q5W150 140 aa7.66□□□□□ -1.18
LITAF-217ENST00000575426 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
LITAF-217ENST00000575426 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
LITAF-217ENST00000575426 HIST1H4AP62805 103 aaKnown RBP7.64□□□□□ -1.19
LITAF-217ENST00000575426 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
LITAF-217ENST00000575426 LINC00643Q86TS7 51 aa7.63□□□□□ -1.19
LITAF-217ENST00000575426 TP53AIP1Q9HCN2 124 aa7.63□□□□□ -1.19
LITAF-217ENST00000575426 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
LITAF-217ENST00000575426 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
LITAF-217ENST00000575426 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
LITAF-217ENST00000575426 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
LITAF-217ENST00000575426 A0A087WVE0 104 aa7.5□□□□□ -1.21
LITAF-217ENST00000575426 TRAV22A0A0B4J277 110 aa7.48□□□□□ -1.21
LITAF-217ENST00000575426 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
LITAF-217ENST00000575426 UQCRQO14949 82 aa7.47□□□□□ -1.21
LITAF-217ENST00000575426 C4orf26Q17RF5 130 aa7.47□□□□□ -1.21
LITAF-217ENST00000575426 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
LITAF-217ENST00000575426 K7ERU9 68 aa7.45□□□□□ -1.22
LITAF-217ENST00000575426 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
LITAF-217ENST00000575426 H0Y9P7 68 aa7.41□□□□□ -1.22
LITAF-217ENST00000575426 ATOX1O00244 68 aa7.41□□□□□ -1.22
LITAF-217ENST00000575426 CYP4F30PQ9H0H9 118 aa7.4□□□□□ -1.22
LITAF-217ENST00000575426 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
LITAF-217ENST00000575426 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
LITAF-217ENST00000575426 SCGB1A1P11684 91 aa7.36□□□□□ -1.23
LITAF-217ENST00000575426 MP68P56378 58 aa7.34□□□□□ -1.23
LITAF-217ENST00000575426 OCR1Q9BZK8 76 aa7.33□□□□□ -1.24
LITAF-217ENST00000575426 IMUPQ9GZP8 106 aa7.33□□□□□ -1.24
LITAF-217ENST00000575426 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
LITAF-217ENST00000575426 MT2AP02795 61 aa7.31□□□□□ -1.24
LITAF-217ENST00000575426 C5orf47Q569G3 176 aa7.31□□□□□ -1.24
LITAF-217ENST00000575426 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
LITAF-217ENST00000575426 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
LITAF-217ENST00000575426 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
LITAF-217ENST00000575426 S4R3F8 94 aa7.29□□□□□ -1.24
LITAF-217ENST00000575426 H3BPC8 53 aa7.25□□□□□ -1.25
LITAF-217ENST00000575426 MT1FP04733 61 aa7.25□□□□□ -1.25
LITAF-217ENST00000575426 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
LITAF-217ENST00000575426 LCA10Q71F78 164 aa7.21□□□□□ -1.26
LITAF-217ENST00000575426 FAM236AA0A1B0GUQ0 79 aa7.2□□□□□ -1.26
LITAF-217ENST00000575426 FAM236BA0A1B0GV22 79 aa7.2□□□□□ -1.26
LITAF-217ENST00000575426 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
LITAF-217ENST00000575426 SMIM20Q8N5G0 67 aa7.2□□□□□ -1.26
LITAF-217ENST00000575426 KRTAP9-6A0A140TA67 174 aa7.19□□□□□ -1.26
LITAF-217ENST00000575426 A8MUN3 132 aa7.16□□□□□ -1.26
LITAF-217ENST00000575426 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
LITAF-217ENST00000575426 TRAV7A0A075B6U4 112 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms