RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 Q96NJ1 140 aa2.45□□□□□ -2.02
TSR1-203ENST00000575049 ASH1LQ9NR48 2969 aaKnown RBP2.45□□□□□ -2.02
TSR1-203ENST00000575049 FLNBO75369 2602 aaKnown RBP2.44□□□□□ -2.02
TSR1-203ENST00000575049 RIF1Q5UIP0 2472 aaKnown RBP2.44□□□□□ -2.02
TSR1-203ENST00000575049 TTC28Q96AY4 2481 aa2.44□□□□□ -2.02
TSR1-203ENST00000575049 A0A096LNI7 61 aa2.44□□□□□ -2.02
TSR1-203ENST00000575049 MRPL34Q9BQ48 92 aaKnown RBP2.44□□□□□ -2.02
TSR1-203ENST00000575049 Q6ZRN7 208 aaPredicted RBP2.43□□□□□ -2.02
TSR1-203ENST00000575049 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
TSR1-203ENST00000575049 MUC6Q6W4X9 2439 aa2.43□□□□□ -2.02
TSR1-203ENST00000575049 CEP295Q9C0D2 2601 aa2.43□□□□□ -2.02
TSR1-203ENST00000575049 IGF2RP11717 2491 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 NOTCH2Q04721 2471 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 NBASA2RRP1 2371 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 ACYP2P14621 99 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 SPATA8Q6RVD6 105 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 FBN2P35556 2912 aa2.42□□□□□ -2.02
TSR1-203ENST00000575049 MAP1AP78559 2803 aaPredicted RBP2.42□□□□□ -2.02
TSR1-203ENST00000575049 FASNP49327 2511 aaKnown RBP2.42□□□□□ -2.02
TSR1-203ENST00000575049 RELNP78509 3460 aa2.41□□□□□ -2.02
TSR1-203ENST00000575049 SVEP1Q4LDE5 3571 aa2.41□□□□□ -2.02
TSR1-203ENST00000575049 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
TSR1-203ENST00000575049 SMR3AQ99954 134 aa2.4□□□□□ -2.03
TSR1-203ENST00000575049 SPG11Q96JI7 2443 aa2.4□□□□□ -2.03
TSR1-203ENST00000575049 CHD6Q8TD26 2715 aa2.4□□□□□ -2.03
TSR1-203ENST00000575049 LAMA5O15230 3695 aa2.39□□□□□ -2.03
TSR1-203ENST00000575049 PTPN13Q12923 2485 aa2.39□□□□□ -2.03
TSR1-203ENST00000575049 MXRA5Q9NR99 2828 aa2.39□□□□□ -2.03
TSR1-203ENST00000575049 COL12A1Q99715 3063 aa2.38□□□□□ -2.03
TSR1-203ENST00000575049 A0A1B0GU69 56 aa2.38□□□□□ -2.03
TSR1-203ENST00000575049 INE1O15225 51 aa2.38□□□□□ -2.03
TSR1-203ENST00000575049 ZFHX3Q15911 3703 aa2.38□□□□□ -2.03
TSR1-203ENST00000575049 USP9YO00507 2555 aaPredicted RBP2.38□□□□□ -2.03
TSR1-203ENST00000575049 EPG5Q9HCE0 2579 aa2.37□□□□□ -2.03
TSR1-203ENST00000575049 UQCR11O14957 56 aa2.37□□□□□ -2.03
TSR1-203ENST00000575049 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
TSR1-203ENST00000575049 ITPR1Q14643 2758 aa2.37□□□□□ -2.03
TSR1-203ENST00000575049 TLN2Q9Y4G6 2542 aa2.36□□□□□ -2.03
TSR1-203ENST00000575049 CRYBG3Q68DQ2 2970 aa2.36□□□□□ -2.03
TSR1-203ENST00000575049 TEP1Q99973 2627 aaKnown RBP2.36□□□□□ -2.03
TSR1-203ENST00000575049 CELSR2Q9HCU4 2923 aa2.36□□□□□ -2.03
TSR1-203ENST00000575049 ANKRD17O75179 2603 aaKnown RBP2.36□□□□□ -2.03
TSR1-203ENST00000575049 JMJD1CQ15652 2540 aa2.35□□□□□ -2.03
TSR1-203ENST00000575049 ANK3Q12955 4377 aaKnown RBP2.35□□□□□ -2.03
TSR1-203ENST00000575049 USP24Q9UPU5 2620 aa2.35□□□□□ -2.03
TSR1-203ENST00000575049 K7EIL1 84 aa2.35□□□□□ -2.03
TSR1-203ENST00000575049 MYO9AB2RTY4 2548 aa2.35□□□□□ -2.03
TSR1-203ENST00000575049 ZANQ9Y493 2812 aa2.35□□□□□ -2.03
TSR1-203ENST00000575049 FN1P02751 2386 aaKnown RBP2.35□□□□□ -2.03
TSR1-203ENST00000575049 TEX15Q9BXT5 2789 aa2.33□□□□□ -2.04
TSR1-203ENST00000575049 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
TSR1-203ENST00000575049 J3QKU1 62 aa2.33□□□□□ -2.04
TSR1-203ENST00000575049 SSBP3-AS1Q7Z2R9 100 aa2.33□□□□□ -2.04
TSR1-203ENST00000575049 APLNQ9ULZ1 77 aa2.33□□□□□ -2.04
TSR1-203ENST00000575049 HIVEP2P31629 2446 aa2.33□□□□□ -2.04
TSR1-203ENST00000575049 UBR5O95071 2799 aaPredicted RBP2.32□□□□□ -2.04
TSR1-203ENST00000575049 POLQO75417 2590 aa2.32□□□□□ -2.04
TSR1-203ENST00000575049 ITPR3Q14573 2671 aa2.32□□□□□ -2.04
TSR1-203ENST00000575049 CFAP46Q8IYW2 2715 aa2.32□□□□□ -2.04
TSR1-203ENST00000575049 UTP20O75691 2785 aaKnown RBP2.32□□□□□ -2.04
TSR1-203ENST00000575049 ZFYVE26Q68DK2 2539 aa2.32□□□□□ -2.04
TSR1-203ENST00000575049 NCOR2Q9Y618 2525 aa2.32□□□□□ -2.04
TSR1-203ENST00000575049 ABCA12Q86UK0 2595 aa2.32□□□□□ -2.04
TSR1-203ENST00000575049 VPS13CQ709C8 3753 aa2.32□□□□□ -2.04
TSR1-203ENST00000575049 DNAH1Q9P2D7 4330 aa2.31□□□□□ -2.04
TSR1-203ENST00000575049 MYO18BQ8IUG5 2567 aa2.31□□□□□ -2.04
TSR1-203ENST00000575049 GCN1Q92616 2671 aaKnown RBP2.31□□□□□ -2.04
TSR1-203ENST00000575049 UBE2DNLQ8IWF7 75 aa2.31□□□□□ -2.04
TSR1-203ENST00000575049 NBPF19A0A087WUL8 3843 aa2.31□□□□□ -2.04
TSR1-203ENST00000575049 AKAP9Q99996 3911 aa2.31□□□□□ -2.04
TSR1-203ENST00000575049 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
TSR1-203ENST00000575049 NBEAL2Q6ZNJ1 2754 aa2.3□□□□□ -2.04
TSR1-203ENST00000575049 ACACBO00763 2458 aa2.29□□□□□ -2.04
TSR1-203ENST00000575049 SPINK6Q6UWN8 80 aa2.29□□□□□ -2.04
TSR1-203ENST00000575049 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
TSR1-203ENST00000575049 PDZD2O15018 2839 aa2.29□□□□□ -2.04
TSR1-203ENST00000575049 NIPBLQ6KC79 2804 aaeCLIP2.29□□□□□ -2.049e-19■■■■■ 98.7
TSR1-203ENST00000575049 FLNCQ14315 2725 aa2.29□□□□□ -2.04
TSR1-203ENST00000575049 IGSF10Q6WRI0 2623 aa2.29□□□□□ -2.04
TSR1-203ENST00000575049 SONP18583 2426 aaKnown RBP2.28□□□□□ -2.04
TSR1-203ENST00000575049 LY6G6CO95867 125 aa2.28□□□□□ -2.04
TSR1-203ENST00000575049 APCP25054 2843 aa2.28□□□□□ -2.04
TSR1-203ENST00000575049 LRRK2Q5S007 2527 aa2.28□□□□□ -2.04
TSR1-203ENST00000575049 HECTD1Q9ULT8 2610 aa2.27□□□□□ -2.05
TSR1-203ENST00000575049 A0A087WTM6 91 aa2.27□□□□□ -2.05
TSR1-203ENST00000575049 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
TSR1-203ENST00000575049 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
TSR1-203ENST00000575049 CCDC168Q8NDH2 2452 aa2.27□□□□□ -2.05
TSR1-203ENST00000575049 FAM208BQ5VWN6 2430 aa2.27□□□□□ -2.05
TSR1-203ENST00000575049 CSMD2Q7Z408 3487 aa2.26□□□□□ -2.05
TSR1-203ENST00000575049 HIVEP1P15822 2718 aa2.26□□□□□ -2.05
TSR1-203ENST00000575049 FLNAP21333 2647 aaKnown RBP2.26□□□□□ -2.05
TSR1-203ENST00000575049 FBN3Q75N90 2809 aa2.26□□□□□ -2.05
TSR1-203ENST00000575049 ALMS1Q8TCU4 4167 aa2.25□□□□□ -2.05
TSR1-203ENST00000575049 Q6ZSA8 131 aa2.25□□□□□ -2.05
TSR1-203ENST00000575049 SPTBN4Q9H254 2564 aa2.25□□□□□ -2.05
TSR1-203ENST00000575049 NF1P21359 2839 aa2.24□□□□□ -2.05
TSR1-203ENST00000575049 H0YAA0 97 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms