RNA–Protein interactions for RNA: ENST00000574999.1

ATP2A3-214, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 3

Gene ATP2A3, Length 776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-214ENST00000574999 VPS25Q9BRG1 176 aa6.67□□□□□ -1.34
ATP2A3-214ENST00000574999 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
ATP2A3-214ENST00000574999 C9JAW5 83 aa6.66□□□□□ -1.34
ATP2A3-214ENST00000574999 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
ATP2A3-214ENST00000574999 LOC110117498A0A087WWA1 95 aa6.65□□□□□ -1.34
ATP2A3-214ENST00000574999 LYRM7Q5U5X0 104 aa6.65□□□□□ -1.34
ATP2A3-214ENST00000574999 C9orf118A6NHY6 69 aa6.64□□□□□ -1.35
ATP2A3-214ENST00000574999 JMJD7-PLA2G4BH0Y9G9 81 aa6.64□□□□□ -1.35
ATP2A3-214ENST00000574999 USH2AO75445 5202 aa6.63□□□□□ -1.35
ATP2A3-214ENST00000574999 A0A1W2PPM0 123 aa6.62□□□□□ -1.35
ATP2A3-214ENST00000574999 C14orf132Q9NPU4 83 aa6.62□□□□□ -1.35
ATP2A3-214ENST00000574999 IGHV6-1A0A0B4J1U7 121 aa6.61□□□□□ -1.35
ATP2A3-214ENST00000574999 A0A1B0GVX0 72 aa6.61□□□□□ -1.35
ATP2A3-214ENST00000574999 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
ATP2A3-214ENST00000574999 MPLKIPQ8TAP9 179 aa6.61□□□□□ -1.35
ATP2A3-214ENST00000574999 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
ATP2A3-214ENST00000574999 A0A1B0GW54 56 aa6.59□□□□□ -1.35
ATP2A3-214ENST00000574999 HRES1P13985 223 aa6.59□□□□□ -1.35
ATP2A3-214ENST00000574999 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
ATP2A3-214ENST00000574999 H3BT86 120 aa6.58□□□□□ -1.36
ATP2A3-214ENST00000574999 PDE6GP18545 87 aa6.58□□□□□ -1.36
ATP2A3-214ENST00000574999 MTURNQ8N3F0 131 aa6.58□□□□□ -1.36
ATP2A3-214ENST00000574999 J3KT08 172 aa6.57□□□□□ -1.36
ATP2A3-214ENST00000574999 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
ATP2A3-214ENST00000574999 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
ATP2A3-214ENST00000574999 MT2AP02795 61 aa6.54□□□□□ -1.36
ATP2A3-214ENST00000574999 RBM12B-AS1Q9P1G2 102 aa6.54□□□□□ -1.36
ATP2A3-214ENST00000574999 A8MWP4 228 aa6.53□□□□□ -1.36
ATP2A3-214ENST00000574999 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
ATP2A3-214ENST00000574999 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
ATP2A3-214ENST00000574999 SPCS1Q9Y6A9 102 aa6.51□□□□□ -1.37
ATP2A3-214ENST00000574999 Q8N9P0 234 aaPredicted RBP6.5□□□□□ -1.37
ATP2A3-214ENST00000574999 ZCCHC13Q8WW36 166 aaKnown RBP6.5□□□□□ -1.37
ATP2A3-214ENST00000574999 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
ATP2A3-214ENST00000574999 MT1FP04733 61 aa6.49□□□□□ -1.37
ATP2A3-214ENST00000574999 NDUFB1O75438 58 aa6.48□□□□□ -1.37
ATP2A3-214ENST00000574999 COL5A1-AS1Q5SY13 56 aa6.48□□□□□ -1.37
ATP2A3-214ENST00000574999 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
ATP2A3-214ENST00000574999 SPINK7P58062 85 aa6.47□□□□□ -1.37
ATP2A3-214ENST00000574999 NREPQ16612 68 aa6.47□□□□□ -1.37
ATP2A3-214ENST00000574999 PRR15Q8IV56 129 aa6.47□□□□□ -1.37
ATP2A3-214ENST00000574999 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
ATP2A3-214ENST00000574999 MMP24-AS1A0A0U1RRL7 71 aa6.45□□□□□ -1.38
ATP2A3-214ENST00000574999 LCE2BO14633 110 aa6.45□□□□□ -1.38
ATP2A3-214ENST00000574999 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
ATP2A3-214ENST00000574999 K7EP34 96 aa6.44□□□□□ -1.38
ATP2A3-214ENST00000574999 K7EQZ3 153 aa6.44□□□□□ -1.38
ATP2A3-214ENST00000574999 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
ATP2A3-214ENST00000574999 Q6ZVQ6 151 aa6.43□□□□□ -1.38
ATP2A3-214ENST00000574999 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
ATP2A3-214ENST00000574999 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
ATP2A3-214ENST00000574999 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
ATP2A3-214ENST00000574999 PCP4L1A6NKN8 68 aa6.37□□□□□ -1.39
ATP2A3-214ENST00000574999 BPY2O14599 106 aa6.37□□□□□ -1.39
ATP2A3-214ENST00000574999 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
ATP2A3-214ENST00000574999 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
ATP2A3-214ENST00000574999 WFDC13Q8IUB5 93 aa6.36□□□□□ -1.39
ATP2A3-214ENST00000574999 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
ATP2A3-214ENST00000574999 Q8N9L7 120 aa6.36□□□□□ -1.39
ATP2A3-214ENST00000574999 LINC00846Q9NV44 126 aa6.36□□□□□ -1.39
ATP2A3-214ENST00000574999 GTF2H5Q6ZYL4 71 aa6.31□□□□□ -1.4
ATP2A3-214ENST00000574999 F8W1H4 67 aa6.28□□□□□ -1.4
ATP2A3-214ENST00000574999 Q5W150 140 aa6.28□□□□□ -1.4
ATP2A3-214ENST00000574999 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
ATP2A3-214ENST00000574999 UBL5Q9BZL1 73 aa6.28□□□□□ -1.4
ATP2A3-214ENST00000574999 NDUFS5O43920 106 aa6.27□□□□□ -1.41
ATP2A3-214ENST00000574999 ETDBQ3ZM63 59 aa6.27□□□□□ -1.41
ATP2A3-214ENST00000574999 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
ATP2A3-214ENST00000574999 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
ATP2A3-214ENST00000574999 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
ATP2A3-214ENST00000574999 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
ATP2A3-214ENST00000574999 IGKV2D-30A0A075B6S6 120 aa6.2□□□□□ -1.42
ATP2A3-214ENST00000574999 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
ATP2A3-214ENST00000574999 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
ATP2A3-214ENST00000574999 CXCL6P80162 114 aa6.19□□□□□ -1.42
ATP2A3-214ENST00000574999 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
ATP2A3-214ENST00000574999 FAM240AA0A1B0GVK7 77 aa6.12□□□□□ -1.43
ATP2A3-214ENST00000574999 C4orf26Q17RF5 130 aa6.12□□□□□ -1.43
ATP2A3-214ENST00000574999 ACYP1P07311 99 aa6.1□□□□□ -1.43
ATP2A3-214ENST00000574999 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
ATP2A3-214ENST00000574999 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
ATP2A3-214ENST00000574999 A0A1B0GV90 55 aa6.06□□□□□ -1.44
ATP2A3-214ENST00000574999 ATP5EP2Q5VTU8 51 aa6.05□□□□□ -1.44
ATP2A3-214ENST00000574999 C5orf47Q569G3 176 aa6.03□□□□□ -1.44
ATP2A3-214ENST00000574999 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
ATP2A3-214ENST00000574999 C1orf64Q8NEQ6 169 aa5.99□□□□□ -1.45
ATP2A3-214ENST00000574999 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
ATP2A3-214ENST00000574999 S4R3F8 94 aa5.98□□□□□ -1.45
ATP2A3-214ENST00000574999 A0A087WVE0 104 aa5.97□□□□□ -1.45
ATP2A3-214ENST00000574999 HIST1H4AP62805 103 aaKnown RBP5.97□□□□□ -1.45
ATP2A3-214ENST00000574999 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
ATP2A3-214ENST00000574999 LCA10Q71F78 164 aa5.97□□□□□ -1.45
ATP2A3-214ENST00000574999 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
ATP2A3-214ENST00000574999 CSAG1Q6PB30 78 aa5.96□□□□□ -1.46
ATP2A3-214ENST00000574999 FAM236AA0A1B0GUQ0 79 aa5.94□□□□□ -1.46
ATP2A3-214ENST00000574999 FAM236BA0A1B0GV22 79 aa5.94□□□□□ -1.46
ATP2A3-214ENST00000574999 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
ATP2A3-214ENST00000574999 MT1BP07438 61 aa5.94□□□□□ -1.46
ATP2A3-214ENST00000574999 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
ATP2A3-214ENST00000574999 UQCRQO14949 82 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms