RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 ETDBQ3ZM63 59 aa17.8■□□□□ 0.44
CTDNEP1-209ENST00000574205 IGHV6-1A0A0B4J1U7 121 aa17.78■□□□□ 0.44
CTDNEP1-209ENST00000574205 A0A1B0GVX0 72 aa17.77■□□□□ 0.44
CTDNEP1-209ENST00000574205 PCOTHQ58A44 107 aa17.76■□□□□ 0.43
CTDNEP1-209ENST00000574205 Q75L30 129 aa17.76■□□□□ 0.43
CTDNEP1-209ENST00000574205 NDUFB1O75438 58 aa17.73■□□□□ 0.43
CTDNEP1-209ENST00000574205 C8orf87E5RJ46 101 aa17.71■□□□□ 0.43
CTDNEP1-209ENST00000574205 NOTCH2NLQ7Z3S9 236 aa17.71■□□□□ 0.43
CTDNEP1-209ENST00000574205 C20orf166-AS1Q96NR2 134 aa17.71■□□□□ 0.43
CTDNEP1-209ENST00000574205 A0A1B0GV90 55 aa17.7■□□□□ 0.42
CTDNEP1-209ENST00000574205 A8MWP4 228 aa17.7■□□□□ 0.42
CTDNEP1-209ENST00000574205 A8MUU9 505 aa17.66■□□□□ 0.42
CTDNEP1-209ENST00000574205 KRTAP16-1A8MUX0 517 aa17.66■□□□□ 0.42
CTDNEP1-209ENST00000574205 Q6ZVQ6 151 aa17.66■□□□□ 0.42
CTDNEP1-209ENST00000574205 KRTAP4-1Q9BYQ7 146 aa17.65■□□□□ 0.42
CTDNEP1-209ENST00000574205 IGKV3D-7A0A0C4DH55 119 aa17.62■□□□□ 0.41
CTDNEP1-209ENST00000574205 LINC00846Q9NV44 126 aa17.62■□□□□ 0.41
CTDNEP1-209ENST00000574205 ATP11AUNQ6ZP68 121 aa17.61■□□□□ 0.41
CTDNEP1-209ENST00000574205 BPY2O14599 106 aa17.59■□□□□ 0.41
CTDNEP1-209ENST00000574205 UBL5Q9BZL1 73 aa17.58■□□□□ 0.41
CTDNEP1-209ENST00000574205 PRR15Q8IV56 129 aa17.57■□□□□ 0.4
CTDNEP1-209ENST00000574205 A0A0U1RQV1 116 aa17.54■□□□□ 0.4
CTDNEP1-209ENST00000574205 C8orf17Q9NRJ1 99 aa17.53■□□□□ 0.4
CTDNEP1-209ENST00000574205 K7EQZ3 153 aa17.49■□□□□ 0.39
CTDNEP1-209ENST00000574205 MMP24-AS1A0A0U1RRL7 71 aa17.4■□□□□ 0.38
CTDNEP1-209ENST00000574205 ACYP1P07311 99 aa17.37■□□□□ 0.37
CTDNEP1-209ENST00000574205 Q8N9P0 234 aaPredicted RBP17.37■□□□□ 0.37
CTDNEP1-209ENST00000574205 FAM240AA0A1B0GVK7 77 aa17.36■□□□□ 0.37
CTDNEP1-209ENST00000574205 Q8N9L7 120 aa17.35■□□□□ 0.37
CTDNEP1-209ENST00000574205 TMEM254Q8TBM7 123 aa17.31■□□□□ 0.36
CTDNEP1-209ENST00000574205 hDV103S1A0JD37 113 aa17.31■□□□□ 0.36
CTDNEP1-209ENST00000574205 MRPL34Q9BQ48 92 aaKnown RBP17.29■□□□□ 0.36
CTDNEP1-209ENST00000574205 CXCL6P80162 114 aa17.26■□□□□ 0.35
CTDNEP1-209ENST00000574205 FAT4Q6V0I7 4981 aa17.24■□□□□ 0.35
CTDNEP1-209ENST00000574205 ZCCHC13Q8WW36 166 aaKnown RBP17.22■□□□□ 0.35
CTDNEP1-209ENST00000574205 CASC2Q6XLA1 102 aa17.18■□□□□ 0.34
CTDNEP1-209ENST00000574205 WFDC13Q8IUB5 93 aa17.18■□□□□ 0.34
CTDNEP1-209ENST00000574205 KRTAP19-2Q3LHN2 52 aa17.15■□□□□ 0.34
CTDNEP1-209ENST00000574205 NDUFS5O43920 106 aa17.12■□□□□ 0.33
CTDNEP1-209ENST00000574205 HCG22E2RYF7 251 aa17.11■□□□□ 0.33
CTDNEP1-209ENST00000574205 ATP5EP2Q5VTU8 51 aa17.08■□□□□ 0.32
CTDNEP1-209ENST00000574205 LCE2CQ5TA81 110 aa17.06■□□□□ 0.32
CTDNEP1-209ENST00000574205 J3QR89 54 aa17.06■□□□□ 0.32
CTDNEP1-209ENST00000574205 LCE2AQ5TA79 106 aaPredicted RBP17.06■□□□□ 0.32
CTDNEP1-209ENST00000574205 COX6B2Q6YFQ2 88 aa16.98■□□□□ 0.31
CTDNEP1-209ENST00000574205 LINC00643Q86TS7 51 aa16.98■□□□□ 0.31
CTDNEP1-209ENST00000574205 SPINK7P58062 85 aa16.94■□□□□ 0.3
CTDNEP1-209ENST00000574205 HRES1P13985 223 aa16.89■□□□□ 0.29
CTDNEP1-209ENST00000574205 HIST1H4AP62805 103 aaKnown RBP16.86■□□□□ 0.29
CTDNEP1-209ENST00000574205 Q5W150 140 aa16.86■□□□□ 0.29
CTDNEP1-209ENST00000574205 MPLKIPQ8TAP9 179 aa16.82■□□□□ 0.28
CTDNEP1-209ENST00000574205 MT1HP80294 61 aa16.81■□□□□ 0.28
CTDNEP1-209ENST00000574205 RBM12B-AS1Q9P1G2 102 aa16.8■□□□□ 0.28
CTDNEP1-209ENST00000574205 TP53AIP1Q9HCN2 124 aa16.78■□□□□ 0.28
CTDNEP1-209ENST00000574205 K7ERU9 68 aa16.71■□□□□ 0.27
CTDNEP1-209ENST00000574205 FAM236DA0A1B0GTK5 79 aa16.7■□□□□ 0.26
CTDNEP1-209ENST00000574205 FAM236CP0DP71 79 aa16.7■□□□□ 0.26
CTDNEP1-209ENST00000574205 A0A087WVE0 104 aa16.69■□□□□ 0.26
CTDNEP1-209ENST00000574205 C7orf65Q6ZTY9 151 aa16.69■□□□□ 0.26
CTDNEP1-209ENST00000574205 IGKV2D-30A0A075B6S6 120 aa16.68■□□□□ 0.26
CTDNEP1-209ENST00000574205 IGKV2-30P06310 120 aa16.68■□□□□ 0.26
CTDNEP1-209ENST00000574205 FLGP20930 4061 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-209ENST00000574205 M0R2T5 61 aa16.58■□□□□ 0.24
CTDNEP1-209ENST00000574205 TRAV22A0A0B4J277 110 aa16.5■□□□□ 0.23
CTDNEP1-209ENST00000574205 UQCRQO14949 82 aa16.46■□□□□ 0.23
CTDNEP1-209ENST00000574205 IMUPQ9GZP8 106 aa16.4■□□□□ 0.22
CTDNEP1-209ENST00000574205 KRTAP10-6P60371 365 aaPredicted RBP16.39■□□□□ 0.21
CTDNEP1-209ENST00000574205 MT-ATP8P03928 68 aa16.37■□□□□ 0.21
CTDNEP1-209ENST00000574205 LORP23490 312 aaPredicted RBP16.35■□□□□ 0.21
CTDNEP1-209ENST00000574205 C4orf26Q17RF5 130 aa16.33■□□□□ 0.2
CTDNEP1-209ENST00000574205 OCR1Q9BZK8 76 aa16.33■□□□□ 0.2
CTDNEP1-209ENST00000574205 ATOX1O00244 68 aa16.32■□□□□ 0.2
CTDNEP1-209ENST00000574205 LOC101927531A0A1B0GV80 90 aa16.31■□□□□ 0.2
CTDNEP1-209ENST00000574205 H0Y9P7 68 aa16.31■□□□□ 0.2
CTDNEP1-209ENST00000574205 CYP4F30PQ9H0H9 118 aa16.29■□□□□ 0.2
CTDNEP1-209ENST00000574205 H1FX-AS1Q4G0G2 97 aa16.26■□□□□ 0.19
CTDNEP1-209ENST00000574205 SCGB1A1P11684 91 aa16.25■□□□□ 0.19
CTDNEP1-209ENST00000574205 MP68P56378 58 aa16.15■□□□□ 0.18
CTDNEP1-209ENST00000574205 C5orf47Q569G3 176 aa16.14■□□□□ 0.18
CTDNEP1-209ENST00000574205 C1orf64Q8NEQ6 169 aa16.14■□□□□ 0.18
CTDNEP1-209ENST00000574205 LINC00208Q96KT6 92 aa16.12■□□□□ 0.17
CTDNEP1-209ENST00000574205 FAM236AA0A1B0GUQ0 79 aa16.09■□□□□ 0.17
CTDNEP1-209ENST00000574205 FAM236BA0A1B0GV22 79 aa16.09■□□□□ 0.17
CTDNEP1-209ENST00000574205 KRTAP3-1Q9BYR8 98 aa16.09■□□□□ 0.17
CTDNEP1-209ENST00000574205 KRTAP9-8Q9BYQ0 159 aa16.02■□□□□ 0.15
CTDNEP1-209ENST00000574205 H3BPC8 53 aa16.01■□□□□ 0.15
CTDNEP1-209ENST00000574205 KRTAP9-2Q9BYQ4 174 aa15.99■□□□□ 0.15
CTDNEP1-209ENST00000574205 SMIM20Q8N5G0 67 aa15.99■□□□□ 0.15
CTDNEP1-209ENST00000574205 LCE2DQ5TA82 110 aaPredicted RBP15.94■□□□□ 0.14
CTDNEP1-209ENST00000574205 TRAV7A0A075B6U4 112 aa15.91■□□□□ 0.14
CTDNEP1-209ENST00000574205 KLKP1Q107X0 134 aa15.91■□□□□ 0.14
CTDNEP1-209ENST00000574205 S4R3F8 94 aa15.86■□□□□ 0.13
CTDNEP1-209ENST00000574205 MT2AP02795 61 aa15.85■□□□□ 0.13
CTDNEP1-209ENST00000574205 LCA10Q71F78 164 aa15.77■□□□□ 0.11
CTDNEP1-209ENST00000574205 A8MUN3 132 aa15.74■□□□□ 0.11
CTDNEP1-209ENST00000574205 MT1FP04733 61 aa15.73■□□□□ 0.11
CTDNEP1-209ENST00000574205 KRTAP10-10P60014 251 aa15.69■□□□□ 0.1
CTDNEP1-209ENST00000574205 CSAG1Q6PB30 78 aa15.66■□□□□ 0.1
CTDNEP1-209ENST00000574205 SERP2Q8N6R1 65 aa15.63■□□□□ 0.09
CTDNEP1-209ENST00000574205 KRTAP3-3Q9BYR6 98 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms