RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 MTURNQ8N3F0 131 aa14.4□□□□□ -0.1
SCARF1-207ENST00000573867 A0A1B0GVX0 72 aa14.38□□□□□ -0.11
SCARF1-207ENST00000573867 C21orf62-AS1Q17RA5 79 aa14.38□□□□□ -0.11
SCARF1-207ENST00000573867 KRTAP9-2Q9BYQ4 174 aa14.38□□□□□ -0.11
SCARF1-207ENST00000573867 PDE6GP18545 87 aa14.36□□□□□ -0.11
SCARF1-207ENST00000573867 FLGP20930 4061 aaPredicted RBP14.35□□□□□ -0.11
SCARF1-207ENST00000573867 H3BT86 120 aa14.33□□□□□ -0.12
SCARF1-207ENST00000573867 A0A1B0GW54 56 aa14.32□□□□□ -0.12
SCARF1-207ENST00000573867 J3KT08 172 aa14.32□□□□□ -0.12
SCARF1-207ENST00000573867 COX6B2Q6YFQ2 88 aa14.31□□□□□ -0.12
SCARF1-207ENST00000573867 C8orf87E5RJ46 101 aa14.3□□□□□ -0.12
SCARF1-207ENST00000573867 SPCS1Q9Y6A9 102 aa14.25□□□□□ -0.13
SCARF1-207ENST00000573867 IGKV3D-7A0A0C4DH55 119 aa14.2□□□□□ -0.14
SCARF1-207ENST00000573867 A8MWP4 228 aa14.2□□□□□ -0.14
SCARF1-207ENST00000573867 COL5A1-AS1Q5SY13 56 aa14.2□□□□□ -0.14
SCARF1-207ENST00000573867 SMCPP49901 116 aaPredicted RBP14.19□□□□□ -0.14
SCARF1-207ENST00000573867 NDUFB1O75438 58 aa14.18□□□□□ -0.14
SCARF1-207ENST00000573867 NREPQ16612 68 aa14.16□□□□□ -0.14
SCARF1-207ENST00000573867 LORP23490 312 aaPredicted RBP14.15□□□□□ -0.14
SCARF1-207ENST00000573867 KRTAP10-6P60371 365 aaPredicted RBP14.15□□□□□ -0.14
SCARF1-207ENST00000573867 C8orf17Q9NRJ1 99 aa14.15□□□□□ -0.14
SCARF1-207ENST00000573867 M0R2T5 61 aa14.11□□□□□ -0.15
SCARF1-207ENST00000573867 Q8N9P0 234 aaPredicted RBP14.1□□□□□ -0.15
SCARF1-207ENST00000573867 PRO0461Q9UI25 63 aa14.1□□□□□ -0.15
SCARF1-207ENST00000573867 PRR15Q8IV56 129 aa14.09□□□□□ -0.15
SCARF1-207ENST00000573867 K7EP34 96 aa14.07□□□□□ -0.16
SCARF1-207ENST00000573867 HRES1P13985 223 aa14.06□□□□□ -0.16
SCARF1-207ENST00000573867 LCE2DQ5TA82 110 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-207ENST00000573867 ZCCHC13Q8WW36 166 aaKnown RBP14.06□□□□□ -0.16
SCARF1-207ENST00000573867 PCP4L1A6NKN8 68 aa14.04□□□□□ -0.16
SCARF1-207ENST00000573867 MPLKIPQ8TAP9 179 aa14.03□□□□□ -0.16
SCARF1-207ENST00000573867 Q6ZVQ6 151 aa14.02□□□□□ -0.17
SCARF1-207ENST00000573867 MMP24-AS1A0A0U1RRL7 71 aa14.01□□□□□ -0.17
SCARF1-207ENST00000573867 K7EQZ3 153 aa14□□□□□ -0.17
SCARF1-207ENST00000573867 BPY2O14599 106 aa13.93□□□□□ -0.18
SCARF1-207ENST00000573867 TMEM254Q8TBM7 123 aa13.92□□□□□ -0.18
SCARF1-207ENST00000573867 MRPL34Q9BQ48 92 aaKnown RBP13.91□□□□□ -0.18
SCARF1-207ENST00000573867 SPINK7P58062 85 aa13.9□□□□□ -0.18
SCARF1-207ENST00000573867 FAM236DA0A1B0GTK5 79 aa13.88□□□□□ -0.19
SCARF1-207ENST00000573867 FAM236CP0DP71 79 aa13.88□□□□□ -0.19
SCARF1-207ENST00000573867 Q8N9L7 120 aa13.87□□□□□ -0.19
SCARF1-207ENST00000573867 RBM12B-AS1Q9P1G2 102 aa13.87□□□□□ -0.19
SCARF1-207ENST00000573867 hDV103S1A0JD37 113 aa13.86□□□□□ -0.19
SCARF1-207ENST00000573867 LINC00846Q9NV44 126 aa13.85□□□□□ -0.19
SCARF1-207ENST00000573867 GTF2H5Q6ZYL4 71 aa13.84□□□□□ -0.19
SCARF1-207ENST00000573867 KRTAP9-6A0A140TA67 174 aa13.8□□□□□ -0.2
SCARF1-207ENST00000573867 F8W1H4 67 aa13.75□□□□□ -0.21
SCARF1-207ENST00000573867 WFDC13Q8IUB5 93 aa13.75□□□□□ -0.21
SCARF1-207ENST00000573867 KRTAP9-8Q9BYQ0 159 aa13.75□□□□□ -0.21
SCARF1-207ENST00000573867 NDUFS5O43920 106 aa13.74□□□□□ -0.21
SCARF1-207ENST00000573867 UBL5Q9BZL1 73 aa13.74□□□□□ -0.21
SCARF1-207ENST00000573867 ETDBQ3ZM63 59 aa13.73□□□□□ -0.21
SCARF1-207ENST00000573867 CASC2Q6XLA1 102 aa13.7□□□□□ -0.22
SCARF1-207ENST00000573867 Q5W150 140 aa13.69□□□□□ -0.22
SCARF1-207ENST00000573867 FSIP2Q5CZC0 6907 aa13.64□□□□□ -0.23
SCARF1-207ENST00000573867 HCG22E2RYF7 251 aa13.62□□□□□ -0.23
SCARF1-207ENST00000573867 CRCT1Q9UGL9 99 aa13.6□□□□□ -0.23
SCARF1-207ENST00000573867 MT2AP02795 61 aa13.57□□□□□ -0.24
SCARF1-207ENST00000573867 IGKV2D-30A0A075B6S6 120 aa13.54□□□□□ -0.24
SCARF1-207ENST00000573867 IGKV2-30P06310 120 aa13.54□□□□□ -0.24
SCARF1-207ENST00000573867 CXCL6P80162 114 aa13.49□□□□□ -0.25
SCARF1-207ENST00000573867 C7orf65Q6ZTY9 151 aa13.49□□□□□ -0.25
SCARF1-207ENST00000573867 MT1FP04733 61 aa13.48□□□□□ -0.25
SCARF1-207ENST00000573867 H1FX-AS1Q4G0G2 97 aa13.37□□□□□ -0.27
SCARF1-207ENST00000573867 ACYP1P07311 99 aa13.33□□□□□ -0.28
SCARF1-207ENST00000573867 KRTAP10-10P60014 251 aa13.33□□□□□ -0.28
SCARF1-207ENST00000573867 USH2AO75445 5202 aa13.32□□□□□ -0.28
SCARF1-207ENST00000573867 FAM240AA0A1B0GVK7 77 aa13.32□□□□□ -0.28
SCARF1-207ENST00000573867 C4orf26Q17RF5 130 aa13.31□□□□□ -0.28
SCARF1-207ENST00000573867 KRTAP9-3Q9BYQ3 159 aa13.31□□□□□ -0.28
SCARF1-207ENST00000573867 A0A1B0GV90 55 aa13.3□□□□□ -0.28
SCARF1-207ENST00000573867 TP53AIP1Q9HCN2 124 aa13.26□□□□□ -0.29
SCARF1-207ENST00000573867 LCE2BO14633 110 aa13.22□□□□□ -0.29
SCARF1-207ENST00000573867 ATP5EP2Q5VTU8 51 aa13.18□□□□□ -0.3
SCARF1-207ENST00000573867 KRTAP3-1Q9BYR8 98 aa13.18□□□□□ -0.3
SCARF1-207ENST00000573867 SSPOA2VEC9 5147 aa13.17□□□□□ -0.3
SCARF1-207ENST00000573867 HIST1H4AP62805 103 aaKnown RBP13.11□□□□□ -0.31
SCARF1-207ENST00000573867 LINC00643Q86TS7 51 aa13.06□□□□□ -0.32
SCARF1-207ENST00000573867 C1orf64Q8NEQ6 169 aa13.06□□□□□ -0.32
SCARF1-207ENST00000573867 A0A087WVE0 104 aa13.04□□□□□ -0.32
SCARF1-207ENST00000573867 CYP4F30PQ9H0H9 118 aa13.04□□□□□ -0.32
SCARF1-207ENST00000573867 TRAV22A0A0B4J277 110 aa13.03□□□□□ -0.32
SCARF1-207ENST00000573867 C5orf47Q569G3 176 aa12.96□□□□□ -0.33
SCARF1-207ENST00000573867 S4R3F8 94 aa12.95□□□□□ -0.34
SCARF1-207ENST00000573867 LOC101927531A0A1B0GV80 90 aa12.93□□□□□ -0.34
SCARF1-207ENST00000573867 UQCRQO14949 82 aa12.93□□□□□ -0.34
SCARF1-207ENST00000573867 LCA10Q71F78 164 aa12.91□□□□□ -0.34
SCARF1-207ENST00000573867 H0Y9P7 68 aa12.89□□□□□ -0.35
SCARF1-207ENST00000573867 KRTAP19-1Q8IUB9 90 aa12.88□□□□□ -0.35
SCARF1-207ENST00000573867 FCGBPQ9Y6R7 5405 aaPredicted RBP12.82□□□□□ -0.36
SCARF1-207ENST00000573867 ATOX1O00244 68 aa12.8□□□□□ -0.36
SCARF1-207ENST00000573867 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
SCARF1-207ENST00000573867 CSAG1Q6PB30 78 aa12.79□□□□□ -0.36
SCARF1-207ENST00000573867 J3QR89 54 aa12.78□□□□□ -0.36
SCARF1-207ENST00000573867 OCR1Q9BZK8 76 aa12.77□□□□□ -0.37
SCARF1-207ENST00000573867 LINC00208Q96KT6 92 aa12.69□□□□□ -0.38
SCARF1-207ENST00000573867 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.68□□□□□ -0.38
SCARF1-207ENST00000573867 KRTAP19-6Q3LI70 58 aa12.68□□□□□ -0.38
SCARF1-207ENST00000573867 FAM236AA0A1B0GUQ0 79 aa12.67□□□□□ -0.38
SCARF1-207ENST00000573867 FAM236BA0A1B0GV22 79 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms