RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 LINC00313P59037 77 aa12.67□□□□□ -0.38
TVP23A-206ENST00000572980 A8MWP4 228 aa12.65□□□□□ -0.38
TVP23A-206ENST00000572980 DSCR10P59022 87 aa12.65□□□□□ -0.38
TVP23A-206ENST00000572980 BPY2O14599 106 aa12.64□□□□□ -0.39
TVP23A-206ENST00000572980 ACYP1P07311 99 aa12.62□□□□□ -0.39
TVP23A-206ENST00000572980 SEC61BP60468 96 aaKnown RBP12.62□□□□□ -0.39
TVP23A-206ENST00000572980 UBR4Q5T4S7 5183 aa12.62□□□□□ -0.39
TVP23A-206ENST00000572980 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
TVP23A-206ENST00000572980 IGKV3D-7A0A0C4DH55 119 aa12.59□□□□□ -0.39
TVP23A-206ENST00000572980 NOTCH2NLQ7Z3S9 236 aa12.58□□□□□ -0.4
TVP23A-206ENST00000572980 FAM240AA0A1B0GVK7 77 aa12.57□□□□□ -0.4
TVP23A-206ENST00000572980 RPL37P61927 97 aaKnown RBP12.57□□□□□ -0.4
TVP23A-206ENST00000572980 PRR15Q8IV56 129 aa12.57□□□□□ -0.4
TVP23A-206ENST00000572980 Q75L30 129 aa12.54□□□□□ -0.4
TVP23A-206ENST00000572980 C20orf166-AS1Q96NR2 134 aa12.52□□□□□ -0.4
TVP23A-206ENST00000572980 K7EQZ3 153 aa12.52□□□□□ -0.41
TVP23A-206ENST00000572980 C8orf17Q9NRJ1 99 aa12.52□□□□□ -0.41
TVP23A-206ENST00000572980 KRTAP16-1A8MUX0 517 aa12.51□□□□□ -0.41
TVP23A-206ENST00000572980 A8MUU9 505 aa12.49□□□□□ -0.41
TVP23A-206ENST00000572980 J3QR89 54 aa12.48□□□□□ -0.41
TVP23A-206ENST00000572980 PCOTHQ58A44 107 aa12.48□□□□□ -0.41
TVP23A-206ENST00000572980 ATP11AUNQ6ZP68 121 aa12.46□□□□□ -0.42
TVP23A-206ENST00000572980 CXCL6P80162 114 aa12.45□□□□□ -0.42
TVP23A-206ENST00000572980 Q8N9L7 120 aa12.44□□□□□ -0.42
TVP23A-206ENST00000572980 MUC17Q685J3 4493 aa12.41□□□□□ -0.42
TVP23A-206ENST00000572980 MMP24-AS1A0A0U1RRL7 71 aa12.41□□□□□ -0.42
TVP23A-206ENST00000572980 hDV103S1A0JD37 113 aa12.38□□□□□ -0.43
TVP23A-206ENST00000572980 TMEM254Q8TBM7 123 aa12.37□□□□□ -0.43
TVP23A-206ENST00000572980 Q8N9P0 234 aaPredicted RBP12.36□□□□□ -0.43
TVP23A-206ENST00000572980 ATP5EP2Q5VTU8 51 aa12.35□□□□□ -0.43
TVP23A-206ENST00000572980 MRPL34Q9BQ48 92 aaKnown RBP12.35□□□□□ -0.43
TVP23A-206ENST00000572980 RNF213Q63HN8 5207 aa12.33□□□□□ -0.44
TVP23A-206ENST00000572980 LINC00643Q86TS7 51 aa12.33□□□□□ -0.44
TVP23A-206ENST00000572980 CASC2Q6XLA1 102 aa12.31□□□□□ -0.44
TVP23A-206ENST00000572980 WFDC13Q8IUB5 93 aa12.3□□□□□ -0.44
TVP23A-206ENST00000572980 KRTAP4-1Q9BYQ7 146 aa12.3□□□□□ -0.44
TVP23A-206ENST00000572980 HCG22E2RYF7 251 aa12.29□□□□□ -0.44
TVP23A-206ENST00000572980 MUC2Q02817 5179 aa12.27□□□□□ -0.44
TVP23A-206ENST00000572980 K7ERU9 68 aa12.27□□□□□ -0.44
TVP23A-206ENST00000572980 NDUFS5O43920 106 aa12.25□□□□□ -0.45
TVP23A-206ENST00000572980 ZCCHC13Q8WW36 166 aaKnown RBP12.23□□□□□ -0.45
TVP23A-206ENST00000572980 HIST1H4AP62805 103 aaKnown RBP12.21□□□□□ -0.46
TVP23A-206ENST00000572980 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
TVP23A-206ENST00000572980 A0A087WVE0 104 aa12.05□□□□□ -0.48
TVP23A-206ENST00000572980 TP53AIP1Q9HCN2 124 aa12.05□□□□□ -0.48
TVP23A-206ENST00000572980 Q5W150 140 aa12.03□□□□□ -0.48
TVP23A-206ENST00000572980 SPINK7P58062 85 aa12.01□□□□□ -0.49
TVP23A-206ENST00000572980 IMUPQ9GZP8 106 aa11.96□□□□□ -0.5
TVP23A-206ENST00000572980 MT-ATP8P03928 68 aa11.93□□□□□ -0.5
TVP23A-206ENST00000572980 KRTAP19-2Q3LHN2 52 aa11.92□□□□□ -0.5
TVP23A-206ENST00000572980 COX6B2Q6YFQ2 88 aa11.92□□□□□ -0.5
TVP23A-206ENST00000572980 HRES1P13985 223 aa11.91□□□□□ -0.5
TVP23A-206ENST00000572980 IGKV2D-30A0A075B6S6 120 aa11.89□□□□□ -0.51
TVP23A-206ENST00000572980 IGKV2-30P06310 120 aa11.89□□□□□ -0.51
TVP23A-206ENST00000572980 C7orf65Q6ZTY9 151 aa11.88□□□□□ -0.51
TVP23A-206ENST00000572980 RBM12B-AS1Q9P1G2 102 aa11.88□□□□□ -0.51
TVP23A-206ENST00000572980 LCE2CQ5TA81 110 aa11.87□□□□□ -0.51
TVP23A-206ENST00000572980 FAT4Q6V0I7 4981 aa11.86□□□□□ -0.51
TVP23A-206ENST00000572980 UQCRQO14949 82 aa11.86□□□□□ -0.51
TVP23A-206ENST00000572980 MPLKIPQ8TAP9 179 aa11.84□□□□□ -0.51
TVP23A-206ENST00000572980 TRAV22A0A0B4J277 110 aa11.84□□□□□ -0.51
TVP23A-206ENST00000572980 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
TVP23A-206ENST00000572980 FAM236DA0A1B0GTK5 79 aa11.8□□□□□ -0.52
TVP23A-206ENST00000572980 FAM236CP0DP71 79 aa11.8□□□□□ -0.52
TVP23A-206ENST00000572980 OCR1Q9BZK8 76 aa11.78□□□□□ -0.52
TVP23A-206ENST00000572980 LCE2AQ5TA79 106 aaPredicted RBP11.75□□□□□ -0.53
TVP23A-206ENST00000572980 ATOX1O00244 68 aa11.75□□□□□ -0.53
TVP23A-206ENST00000572980 H0Y9P7 68 aa11.74□□□□□ -0.53
TVP23A-206ENST00000572980 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.54
TVP23A-206ENST00000572980 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.54
TVP23A-206ENST00000572980 LOC101927531A0A1B0GV80 90 aa11.71□□□□□ -0.54
TVP23A-206ENST00000572980 MT1HP80294 61 aa11.7□□□□□ -0.54
TVP23A-206ENST00000572980 C5orf47Q569G3 176 aa11.67□□□□□ -0.54
TVP23A-206ENST00000572980 CYP4F30PQ9H0H9 118 aa11.67□□□□□ -0.54
TVP23A-206ENST00000572980 MP68P56378 58 aa11.67□□□□□ -0.54
TVP23A-206ENST00000572980 SMIM20Q8N5G0 67 aa11.64□□□□□ -0.55
TVP23A-206ENST00000572980 C4orf26Q17RF5 130 aa11.62□□□□□ -0.55
TVP23A-206ENST00000572980 C1orf64Q8NEQ6 169 aa11.62□□□□□ -0.55
TVP23A-206ENST00000572980 LINC00208Q96KT6 92 aa11.62□□□□□ -0.55
TVP23A-206ENST00000572980 M0R2T5 61 aa11.6□□□□□ -0.55
TVP23A-206ENST00000572980 H3BPC8 53 aa11.57□□□□□ -0.56
TVP23A-206ENST00000572980 TRAV7A0A075B6U4 112 aa11.55□□□□□ -0.56
TVP23A-206ENST00000572980 H1FX-AS1Q4G0G2 97 aa11.53□□□□□ -0.56
TVP23A-206ENST00000572980 FLGP20930 4061 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-206ENST00000572980 KLKP1Q107X0 134 aa11.42□□□□□ -0.58
TVP23A-206ENST00000572980 KRTAP3-1Q9BYR8 98 aa11.42□□□□□ -0.58
TVP23A-206ENST00000572980 SERP2Q8N6R1 65 aa11.4□□□□□ -0.58
TVP23A-206ENST00000572980 KRTAP10-6P60371 365 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-206ENST00000572980 LORP23490 312 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-206ENST00000572980 A8MUN3 132 aa11.28□□□□□ -0.6
TVP23A-206ENST00000572980 S4R3F8 94 aa11.27□□□□□ -0.61
TVP23A-206ENST00000572980 C20orf197Q8N268 126 aa11.26□□□□□ -0.61
TVP23A-206ENST00000572980 SNURFQ9Y675 71 aa11.25□□□□□ -0.61
TVP23A-206ENST00000572980 COX7CP15954 63 aa11.21□□□□□ -0.61
TVP23A-206ENST00000572980 LCA10Q71F78 164 aa11.19□□□□□ -0.62
TVP23A-206ENST00000572980 KRTAP9-8Q9BYQ0 159 aa11.16□□□□□ -0.62
TVP23A-206ENST00000572980 ANAPC13Q9BS18 74 aa11.15□□□□□ -0.62
TVP23A-206ENST00000572980 DMAC1Q96GE9 116 aa11.14□□□□□ -0.63
TVP23A-206ENST00000572980 CSAG1Q6PB30 78 aa11.13□□□□□ -0.63
TVP23A-206ENST00000572980 MT2AP02795 61 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms