RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
POLR2A-201ENST00000572844 C4orf26Q17RF5 130 aa9.52□□□□□ -0.89
POLR2A-201ENST00000572844 SACSQ9NZJ4 4579 aa9.51□□□□□ -0.89
POLR2A-201ENST00000572844 KRTAP13-2Q52LG2 175 aa9.5□□□□□ -0.89
POLR2A-201ENST00000572844 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
POLR2A-201ENST00000572844 A0A087X002 238 aa9.49□□□□□ -0.89
POLR2A-201ENST00000572844 C8orf87E5RJ46 101 aa9.47□□□□□ -0.89
POLR2A-201ENST00000572844 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
POLR2A-201ENST00000572844 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.89
POLR2A-201ENST00000572844 SPINK6Q6UWN8 80 aa9.46□□□□□ -0.89
POLR2A-201ENST00000572844 NDUFS5O43920 106 aa9.44□□□□□ -0.9
POLR2A-201ENST00000572844 LINC00336Q6ZUF6 198 aa9.44□□□□□ -0.9
POLR2A-201ENST00000572844 PRR4Q16378 134 aa9.41□□□□□ -0.9
POLR2A-201ENST00000572844 LRP1BQ9NZR2 4599 aa9.41□□□□□ -0.9
POLR2A-201ENST00000572844 IGLV7-46A0A075B6I9 117 aa9.4□□□□□ -0.91
POLR2A-201ENST00000572844 C1orf195Q5TG92 126 aa9.4□□□□□ -0.91
POLR2A-201ENST00000572844 LIMD2Q9BT23 127 aa9.4□□□□□ -0.91
POLR2A-201ENST00000572844 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
POLR2A-201ENST00000572844 LINC00313P59037 77 aa9.35□□□□□ -0.91
POLR2A-201ENST00000572844 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
POLR2A-201ENST00000572844 Q1T7F1 81 aa9.35□□□□□ -0.91
POLR2A-201ENST00000572844 LOC101927531A0A1B0GV80 90 aa9.34□□□□□ -0.91
POLR2A-201ENST00000572844 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
POLR2A-201ENST00000572844 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
POLR2A-201ENST00000572844 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
POLR2A-201ENST00000572844 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
POLR2A-201ENST00000572844 A0A1B0GVY2 172 aa9.31□□□□□ -0.92
POLR2A-201ENST00000572844 SPINK1P00995 79 aa9.31□□□□□ -0.92
POLR2A-201ENST00000572844 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
POLR2A-201ENST00000572844 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
POLR2A-201ENST00000572844 Q5W150 140 aa9.3□□□□□ -0.92
POLR2A-201ENST00000572844 VPS13BQ7Z7G8 4022 aa9.29□□□□□ -0.92
POLR2A-201ENST00000572844 RYR2Q92736 4967 aa9.29□□□□□ -0.92
POLR2A-201ENST00000572844 RPS29P62273 56 aaKnown RBP9.27□□□□□ -0.93
POLR2A-201ENST00000572844 V9GYY9 64 aa9.27□□□□□ -0.93
POLR2A-201ENST00000572844 KRTAP16-1A8MUX0 517 aa9.27□□□□□ -0.93
POLR2A-201ENST00000572844 FAM229AH3BQW9 127 aa9.27□□□□□ -0.93
POLR2A-201ENST00000572844 PKHD1P08F94 4074 aa9.26□□□□□ -0.93
POLR2A-201ENST00000572844 SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
POLR2A-201ENST00000572844 COA5Q86WW8 74 aa9.24□□□□□ -0.93
POLR2A-201ENST00000572844 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.93
POLR2A-201ENST00000572844 PRR26Q8N8Z3 221 aa9.19□□□□□ -0.94
POLR2A-201ENST00000572844 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
POLR2A-201ENST00000572844 KRTAP10-4P60372 401 aaPredicted RBP9.18□□□□□ -0.94
POLR2A-201ENST00000572844 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
POLR2A-201ENST00000572844 PRO0628Q9UI54 55 aa9.16□□□□□ -0.94
POLR2A-201ENST00000572844 IGKV2-30P06310 120 aa9.16□□□□□ -0.94
POLR2A-201ENST00000572844 HRES1P13985 223 aa9.14□□□□□ -0.95
POLR2A-201ENST00000572844 PSPHP1O15172 72 aa9.1□□□□□ -0.95
POLR2A-201ENST00000572844 RYR3Q15413 4870 aa9.09□□□□□ -0.95
POLR2A-201ENST00000572844 BRK1Q8WUW1 75 aa9.08□□□□□ -0.96
POLR2A-201ENST00000572844 A8MUN3 132 aa9.08□□□□□ -0.96
POLR2A-201ENST00000572844 ACYP2P14621 99 aa9.08□□□□□ -0.96
POLR2A-201ENST00000572844 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
POLR2A-201ENST00000572844 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
POLR2A-201ENST00000572844 DMAC1Q96GE9 116 aa9.07□□□□□ -0.96
POLR2A-201ENST00000572844 Q5VV11 94 aa9.05□□□□□ -0.96
POLR2A-201ENST00000572844 LINC01558Q9Y6Z2 57 aa9.04□□□□□ -0.96
POLR2A-201ENST00000572844 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
POLR2A-201ENST00000572844 PKHD1L1Q86WI1 4243 aa9□□□□□ -0.97
POLR2A-201ENST00000572844 Q75L30 129 aa8.99□□□□□ -0.97
POLR2A-201ENST00000572844 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
POLR2A-201ENST00000572844 FAT1Q14517 4588 aa8.96□□□□□ -0.97
POLR2A-201ENST00000572844 C20orf166-AS1Q96NR2 134 aa8.95□□□□□ -0.98
POLR2A-201ENST00000572844 A8MUU9 505 aa8.94□□□□□ -0.98
POLR2A-201ENST00000572844 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
POLR2A-201ENST00000572844 C7orf65Q6ZTY9 151 aa8.93□□□□□ -0.98
POLR2A-201ENST00000572844 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
POLR2A-201ENST00000572844 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
POLR2A-201ENST00000572844 HSPG2P98160 4391 aa8.83□□□□□ -1
POLR2A-201ENST00000572844 FLG2Q5D862 2391 aaPredicted RBP8.82□□□□□ -1
POLR2A-201ENST00000572844 A6NED7 52 aa8.82□□□□□ -1
POLR2A-201ENST00000572844 Q5VSD8 79 aa8.82□□□□□ -1
POLR2A-201ENST00000572844 Q8N1X5 172 aa8.81□□□□□ -1
POLR2A-201ENST00000572844 CDC42SE1Q9NRR8 79 aa8.78□□□□□ -1
POLR2A-201ENST00000572844 LCA10Q71F78 164 aa8.77□□□□□ -1.01
POLR2A-201ENST00000572844 EPPK1P58107 5090 aaKnown RBP8.76□□□□□ -1.01
POLR2A-201ENST00000572844 RYR1P21817 5038 aa8.76□□□□□ -1.01
POLR2A-201ENST00000572844 A8MU10 97 aa8.74□□□□□ -1.01
POLR2A-201ENST00000572844 SPINK7P58062 85 aa8.73□□□□□ -1.01
POLR2A-201ENST00000572844 A0A1B0GU69 56 aa8.71□□□□□ -1.01
POLR2A-201ENST00000572844 ATP11AUNQ6ZP68 121 aa8.71□□□□□ -1.02
POLR2A-201ENST00000572844 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
POLR2A-201ENST00000572844 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
POLR2A-201ENST00000572844 TNXBP22105 4242 aa8.69□□□□□ -1.02
POLR2A-201ENST00000572844 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
POLR2A-201ENST00000572844 SPTSSBQ8NFR3 76 aa8.66□□□□□ -1.02
POLR2A-201ENST00000572844 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
POLR2A-201ENST00000572844 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
POLR2A-201ENST00000572844 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
POLR2A-201ENST00000572844 RPL37P61927 97 aaKnown RBP8.6□□□□□ -1.03
POLR2A-201ENST00000572844 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
POLR2A-201ENST00000572844 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
POLR2A-201ENST00000572844 UQCR11O14957 56 aa8.55□□□□□ -1.04
POLR2A-201ENST00000572844 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
POLR2A-201ENST00000572844 XP32Q5T750 250 aa8.55□□□□□ -1.04
POLR2A-201ENST00000572844 SEC61GP60059 68 aa8.53□□□□□ -1.04
POLR2A-201ENST00000572844 A6NN06 94 aa8.52□□□□□ -1.05
POLR2A-201ENST00000572844 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
POLR2A-201ENST00000572844 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms