RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 TMEM238LA0A1B0GVL6 79 aa4.72□□□□□ -1.65
TRAPPC1-205ENST00000572656 A6NJY4 79 aa4.72□□□□□ -1.65
TRAPPC1-205ENST00000572656 TMEM256-PLSCR3K7ERE1 68 aa4.72□□□□□ -1.65
TRAPPC1-205ENST00000572656 C2orf91Q6ZV80 131 aa4.72□□□□□ -1.65
TRAPPC1-205ENST00000572656 SPATA45Q537H7 98 aa4.7□□□□□ -1.66
TRAPPC1-205ENST00000572656 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC1-205ENST00000572656 FXYD2P54710 66 aa4.69□□□□□ -1.66
TRAPPC1-205ENST00000572656 UBE2V1Q13404 147 aa4.69□□□□□ -1.66
TRAPPC1-205ENST00000572656 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
TRAPPC1-205ENST00000572656 PAM16Q9Y3D7 125 aa4.69□□□□□ -1.66
TRAPPC1-205ENST00000572656 J3KT08 172 aa4.68□□□□□ -1.66
TRAPPC1-205ENST00000572656 VPS25Q9BRG1 176 aa4.68□□□□□ -1.66
TRAPPC1-205ENST00000572656 PSMB2P49721 201 aa4.67□□□□□ -1.66
TRAPPC1-205ENST00000572656 COX6CP09669 75 aa4.66□□□□□ -1.66
TRAPPC1-205ENST00000572656 VAMP8Q9BV40 100 aa4.66□□□□□ -1.66
TRAPPC1-205ENST00000572656 NDUFB1O75438 58 aa4.65□□□□□ -1.67
TRAPPC1-205ENST00000572656 RBM3P98179 157 aaKnown RBP4.65□□□□□ -1.67
TRAPPC1-205ENST00000572656 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.67
TRAPPC1-205ENST00000572656 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
TRAPPC1-205ENST00000572656 DSCR8Q96T75 97 aa4.65□□□□□ -1.67
TRAPPC1-205ENST00000572656 S100A1P23297 94 aa4.64□□□□□ -1.67
TRAPPC1-205ENST00000572656 K7ERJ3 54 aa4.63□□□□□ -1.67
TRAPPC1-205ENST00000572656 H1FX-AS1Q4G0G2 97 aa4.62□□□□□ -1.67
TRAPPC1-205ENST00000572656 Q6ZQT0 140 aa4.62□□□□□ -1.67
TRAPPC1-205ENST00000572656 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
TRAPPC1-205ENST00000572656 NEBP20929 6669 aa4.61□□□□□ -1.67
TRAPPC1-205ENST00000572656 C9JAW5 83 aa4.61□□□□□ -1.67
TRAPPC1-205ENST00000572656 HSD52Q0P140 79 aa4.6□□□□□ -1.67
TRAPPC1-205ENST00000572656 IGKV3D-7A0A0C4DH55 119 aa4.59□□□□□ -1.67
TRAPPC1-205ENST00000572656 Q6ZVQ6 151 aa4.59□□□□□ -1.67
TRAPPC1-205ENST00000572656 BAALC-AS2P0C853 105 aa4.57□□□□□ -1.68
TRAPPC1-205ENST00000572656 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
TRAPPC1-205ENST00000572656 A0A1B0GW54 56 aa4.56□□□□□ -1.68
TRAPPC1-205ENST00000572656 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
TRAPPC1-205ENST00000572656 LOC110117498A0A087WWA1 95 aa4.53□□□□□ -1.68
TRAPPC1-205ENST00000572656 TMEM254Q8TBM7 123 aa4.53□□□□□ -1.68
TRAPPC1-205ENST00000572656 MRPL34Q9BQ48 92 aaKnown RBP4.53□□□□□ -1.68
TRAPPC1-205ENST00000572656 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
TRAPPC1-205ENST00000572656 A6NN06 94 aa4.52□□□□□ -1.69
TRAPPC1-205ENST00000572656 JMJD7-PLA2G4BH0Y9G9 81 aa4.52□□□□□ -1.69
TRAPPC1-205ENST00000572656 PDE6GP18545 87 aa4.51□□□□□ -1.69
TRAPPC1-205ENST00000572656 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
TRAPPC1-205ENST00000572656 hDV103S1A0JD37 113 aa4.49□□□□□ -1.69
TRAPPC1-205ENST00000572656 NDUFS5O43920 106 aa4.49□□□□□ -1.69
TRAPPC1-205ENST00000572656 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
TRAPPC1-205ENST00000572656 NREPQ16612 68 aa4.49□□□□□ -1.69
TRAPPC1-205ENST00000572656 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
TRAPPC1-205ENST00000572656 PYY3Q5JQD4 70 aa4.49□□□□□ -1.69
TRAPPC1-205ENST00000572656 MT1BP07438 61 aa4.48□□□□□ -1.69
TRAPPC1-205ENST00000572656 C7orf65Q6ZTY9 151 aa4.48□□□□□ -1.69
TRAPPC1-205ENST00000572656 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
TRAPPC1-205ENST00000572656 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
TRAPPC1-205ENST00000572656 ATXN8Q156A1 80 aa4.47□□□□□ -1.69
TRAPPC1-205ENST00000572656 C14orf132Q9NPU4 83 aa4.47□□□□□ -1.69
TRAPPC1-205ENST00000572656 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.7
TRAPPC1-205ENST00000572656 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.7
TRAPPC1-205ENST00000572656 Q5VV11 94 aa4.46□□□□□ -1.7
TRAPPC1-205ENST00000572656 Q5W150 140 aa4.46□□□□□ -1.7
TRAPPC1-205ENST00000572656 K7EQZ3 153 aa4.45□□□□□ -1.7
TRAPPC1-205ENST00000572656 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
TRAPPC1-205ENST00000572656 TMA7Q9Y2S6 64 aaKnown RBP4.45□□□□□ -1.7
TRAPPC1-205ENST00000572656 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
TRAPPC1-205ENST00000572656 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
TRAPPC1-205ENST00000572656 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
TRAPPC1-205ENST00000572656 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
TRAPPC1-205ENST00000572656 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
TRAPPC1-205ENST00000572656 NAA38Q9BRA0 125 aaKnown RBP4.41□□□□□ -1.7
TRAPPC1-205ENST00000572656 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
TRAPPC1-205ENST00000572656 S4R3F8 94 aa4.39□□□□□ -1.71
TRAPPC1-205ENST00000572656 HCG22E2RYF7 251 aa4.38□□□□□ -1.71
TRAPPC1-205ENST00000572656 BPY2O14599 106 aa4.38□□□□□ -1.71
TRAPPC1-205ENST00000572656 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
TRAPPC1-205ENST00000572656 KMT2DO14686 5537 aa4.37□□□□□ -1.71
TRAPPC1-205ENST00000572656 CXCL6P80162 114 aa4.37□□□□□ -1.71
TRAPPC1-205ENST00000572656 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
TRAPPC1-205ENST00000572656 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
TRAPPC1-205ENST00000572656 M0R143 59 aa4.36□□□□□ -1.71
TRAPPC1-205ENST00000572656 KLKP1Q107X0 134 aa4.35□□□□□ -1.71
TRAPPC1-205ENST00000572656 LCA10Q71F78 164 aa4.35□□□□□ -1.71
TRAPPC1-205ENST00000572656 Q8N9L7 120 aa4.34□□□□□ -1.71
TRAPPC1-205ENST00000572656 C1orf64Q8NEQ6 169 aa4.34□□□□□ -1.71
TRAPPC1-205ENST00000572656 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
TRAPPC1-205ENST00000572656 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
TRAPPC1-205ENST00000572656 IMUPQ9GZP8 106 aa4.31□□□□□ -1.72
TRAPPC1-205ENST00000572656 H3BT86 120 aa4.3□□□□□ -1.72
TRAPPC1-205ENST00000572656 SMCPP49901 116 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC1-205ENST00000572656 CRIPTQ9P021 101 aa4.28□□□□□ -1.72
TRAPPC1-205ENST00000572656 TSTD3H0UI37 97 aa4.27□□□□□ -1.73
TRAPPC1-205ENST00000572656 KRTAP3-3Q9BYR6 98 aa4.27□□□□□ -1.73
TRAPPC1-205ENST00000572656 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
TRAPPC1-205ENST00000572656 SMIM6P0DI80 62 aa4.23□□□□□ -1.73
TRAPPC1-205ENST00000572656 LOC105371267A0A1B0GV96 52 aa4.22□□□□□ -1.73
TRAPPC1-205ENST00000572656 SPRR2EP22531 72 aa4.22□□□□□ -1.73
TRAPPC1-205ENST00000572656 SPRR2BP35325 72 aa4.22□□□□□ -1.73
TRAPPC1-205ENST00000572656 SPRR2AP35326 72 aa4.22□□□□□ -1.73
TRAPPC1-205ENST00000572656 A0A1W2PPM0 123 aa4.21□□□□□ -1.74
TRAPPC1-205ENST00000572656 C9orf118A6NHY6 69 aa4.21□□□□□ -1.74
TRAPPC1-205ENST00000572656 BATFQ16520 125 aa4.21□□□□□ -1.74
TRAPPC1-205ENST00000572656 TP53AIP1Q9HCN2 124 aa4.21□□□□□ -1.74
TRAPPC1-205ENST00000572656 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms