RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 C21orf62-AS1Q17RA5 79 aa15.39■□□□□ 0.05
CTDNEP1-206ENST00000571409 Q6ZQT0 140 aa15.35■□□□□ 0.05
CTDNEP1-206ENST00000571409 J3KT08 172 aa15.33■□□□□ 0.04
CTDNEP1-206ENST00000571409 SMIM6P0DI80 62 aa15.33■□□□□ 0.04
CTDNEP1-206ENST00000571409 JMJD7-PLA2G4BH0Y9G9 81 aa15.32■□□□□ 0.04
CTDNEP1-206ENST00000571409 FAM236DA0A1B0GTK5 79 aa15.29■□□□□ 0.04
CTDNEP1-206ENST00000571409 FAM236CP0DP71 79 aa15.29■□□□□ 0.04
CTDNEP1-206ENST00000571409 HRES1P13985 223 aa15.27■□□□□ 0.04
CTDNEP1-206ENST00000571409 LOC110117498A0A087WWA1 95 aa15.26■□□□□ 0.03
CTDNEP1-206ENST00000571409 RBM12B-AS1Q9P1G2 102 aa15.25■□□□□ 0.03
CTDNEP1-206ENST00000571409 MPLKIPQ8TAP9 179 aa15.24■□□□□ 0.03
CTDNEP1-206ENST00000571409 NDUFB1O75438 58 aa15.22■□□□□ 0.03
CTDNEP1-206ENST00000571409 A0A1B0GW54 56 aa15.21■□□□□ 0.03
CTDNEP1-206ENST00000571409 LYRM7Q5U5X0 104 aa15.21■□□□□ 0.03
CTDNEP1-206ENST00000571409 PDE6GP18545 87 aa15.2■□□□□ 0.02
CTDNEP1-206ENST00000571409 C14orf132Q9NPU4 83 aa15.2■□□□□ 0.02
CTDNEP1-206ENST00000571409 KRTAP9-8Q9BYQ0 159 aa15.19■□□□□ 0.02
CTDNEP1-206ENST00000571409 ZCCHC13Q8WW36 166 aaKnown RBP15.18■□□□□ 0.02
CTDNEP1-206ENST00000571409 TSTD3H0UI37 97 aa15.17■□□□□ 0.02
CTDNEP1-206ENST00000571409 BATFQ16520 125 aa15.17■□□□□ 0.02
CTDNEP1-206ENST00000571409 A8MWP4 228 aa15.15■□□□□ 0.02
CTDNEP1-206ENST00000571409 Q8N9P0 234 aaPredicted RBP15.12■□□□□ 0.01
CTDNEP1-206ENST00000571409 C8orf17Q9NRJ1 99 aa15.12■□□□□ 0.01
CTDNEP1-206ENST00000571409 IGKV3D-7A0A0C4DH55 119 aa15.09■□□□□ 0.01
CTDNEP1-206ENST00000571409 SPINK7P58062 85 aa15.06■□□□□ 0
CTDNEP1-206ENST00000571409 NREPQ16612 68 aa15.04■□□□□ -0
CTDNEP1-206ENST00000571409 MTURNQ8N3F0 131 aa15.02■□□□□ -0
CTDNEP1-206ENST00000571409 Q6ZVQ6 151 aa15□□□□□ -0.01
CTDNEP1-206ENST00000571409 C9orf118A6NHY6 69 aa14.99□□□□□ -0.01
CTDNEP1-206ENST00000571409 PRR15Q8IV56 129 aa14.99□□□□□ -0.01
CTDNEP1-206ENST00000571409 MT2AP02795 61 aa14.98□□□□□ -0.01
CTDNEP1-206ENST00000571409 H3BT86 120 aa14.96□□□□□ -0.01
CTDNEP1-206ENST00000571409 TAX1BP3O14907 124 aa14.95□□□□□ -0.02
CTDNEP1-206ENST00000571409 LOC105371267A0A1B0GV96 52 aa14.94□□□□□ -0.02
CTDNEP1-206ENST00000571409 A0A1W2PPM0 123 aa14.94□□□□□ -0.02
CTDNEP1-206ENST00000571409 MMP24-AS1A0A0U1RRL7 71 aa14.9□□□□□ -0.02
CTDNEP1-206ENST00000571409 TMEM254Q8TBM7 123 aa14.87□□□□□ -0.03
CTDNEP1-206ENST00000571409 MRPL34Q9BQ48 92 aaKnown RBP14.87□□□□□ -0.03
CTDNEP1-206ENST00000571409 MT1FP04733 61 aa14.86□□□□□ -0.03
CTDNEP1-206ENST00000571409 WFDC13Q8IUB5 93 aa14.86□□□□□ -0.03
CTDNEP1-206ENST00000571409 K7EQZ3 153 aa14.85□□□□□ -0.03
CTDNEP1-206ENST00000571409 hDV103S1A0JD37 113 aa14.8□□□□□ -0.04
CTDNEP1-206ENST00000571409 KRTAP10-10P60014 251 aa14.8□□□□□ -0.04
CTDNEP1-206ENST00000571409 USH2AO75445 5202 aa14.79□□□□□ -0.04
CTDNEP1-206ENST00000571409 BPY2O14599 106 aa14.76□□□□□ -0.05
CTDNEP1-206ENST00000571409 NDUFS5O43920 106 aa14.75□□□□□ -0.05
CTDNEP1-206ENST00000571409 SPCS1Q9Y6A9 102 aa14.73□□□□□ -0.05
CTDNEP1-206ENST00000571409 KRTAP9-3Q9BYQ3 159 aa14.71□□□□□ -0.05
CTDNEP1-206ENST00000571409 LCE2BO14633 110 aa14.67□□□□□ -0.06
CTDNEP1-206ENST00000571409 SSPOA2VEC9 5147 aa14.66□□□□□ -0.06
CTDNEP1-206ENST00000571409 SMCPP49901 116 aaPredicted RBP14.64□□□□□ -0.07
CTDNEP1-206ENST00000571409 Q8N9L7 120 aa14.62□□□□□ -0.07
CTDNEP1-206ENST00000571409 IGKV2D-30A0A075B6S6 120 aa14.57□□□□□ -0.08
CTDNEP1-206ENST00000571409 IGKV2-30P06310 120 aa14.57□□□□□ -0.08
CTDNEP1-206ENST00000571409 Q5W150 140 aa14.57□□□□□ -0.08
CTDNEP1-206ENST00000571409 CASC2Q6XLA1 102 aa14.57□□□□□ -0.08
CTDNEP1-206ENST00000571409 COL5A1-AS1Q5SY13 56 aa14.54□□□□□ -0.08
CTDNEP1-206ENST00000571409 H1FX-AS1Q4G0G2 97 aa14.53□□□□□ -0.08
CTDNEP1-206ENST00000571409 C7orf65Q6ZTY9 151 aa14.52□□□□□ -0.09
CTDNEP1-206ENST00000571409 HCG22E2RYF7 251 aa14.51□□□□□ -0.09
CTDNEP1-206ENST00000571409 PRO0461Q9UI25 63 aa14.5□□□□□ -0.09
CTDNEP1-206ENST00000571409 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.47□□□□□ -0.09
CTDNEP1-206ENST00000571409 LINC00846Q9NV44 126 aa14.47□□□□□ -0.09
CTDNEP1-206ENST00000571409 K7EP34 96 aa14.46□□□□□ -0.09
CTDNEP1-206ENST00000571409 KRTAP19-1Q8IUB9 90 aa14.46□□□□□ -0.09
CTDNEP1-206ENST00000571409 UBL5Q9BZL1 73 aa14.46□□□□□ -0.09
CTDNEP1-206ENST00000571409 CXCL6P80162 114 aa14.39□□□□□ -0.11
CTDNEP1-206ENST00000571409 FCGBPQ9Y6R7 5405 aaPredicted RBP14.35□□□□□ -0.11
CTDNEP1-206ENST00000571409 KRTAP9-7A8MTY7 169 aa14.31□□□□□ -0.12
CTDNEP1-206ENST00000571409 C4orf26Q17RF5 130 aa14.31□□□□□ -0.12
CTDNEP1-206ENST00000571409 GTF2H5Q6ZYL4 71 aa14.26□□□□□ -0.13
CTDNEP1-206ENST00000571409 F8W1H4 67 aa14.18□□□□□ -0.14
CTDNEP1-206ENST00000571409 KRTAP19-6Q3LI70 58 aa14.16□□□□□ -0.14
CTDNEP1-206ENST00000571409 ETDBQ3ZM63 59 aa14.15□□□□□ -0.14
CTDNEP1-206ENST00000571409 PCP4L1A6NKN8 68 aa14.12□□□□□ -0.15
CTDNEP1-206ENST00000571409 TP53AIP1Q9HCN2 124 aa14.1□□□□□ -0.15
CTDNEP1-206ENST00000571409 KRTAP3-1Q9BYR8 98 aa14.08□□□□□ -0.16
CTDNEP1-206ENST00000571409 C5orf47Q569G3 176 aa14.06□□□□□ -0.16
CTDNEP1-206ENST00000571409 C1orf64Q8NEQ6 169 aa14.04□□□□□ -0.16
CTDNEP1-206ENST00000571409 S4R3F8 94 aa14.02□□□□□ -0.17
CTDNEP1-206ENST00000571409 FAM236AA0A1B0GUQ0 79 aa13.92□□□□□ -0.18
CTDNEP1-206ENST00000571409 FAM236BA0A1B0GV22 79 aa13.92□□□□□ -0.18
CTDNEP1-206ENST00000571409 LCA10Q71F78 164 aa13.92□□□□□ -0.18
CTDNEP1-206ENST00000571409 CSAG1Q6PB30 78 aa13.9□□□□□ -0.18
CTDNEP1-206ENST00000571409 MACF1Q9UPN3 7388 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-206ENST00000571409 ACYP1P07311 99 aa13.83□□□□□ -0.2
CTDNEP1-206ENST00000571409 CYP4F30PQ9H0H9 118 aa13.83□□□□□ -0.2
CTDNEP1-206ENST00000571409 TRAV22A0A0B4J277 110 aa13.8□□□□□ -0.2
CTDNEP1-206ENST00000571409 FAM240AA0A1B0GVK7 77 aa13.74□□□□□ -0.21
CTDNEP1-206ENST00000571409 LOC101927531A0A1B0GV80 90 aa13.73□□□□□ -0.21
CTDNEP1-206ENST00000571409 ATP5EP2Q5VTU8 51 aa13.73□□□□□ -0.21
CTDNEP1-206ENST00000571409 SYNE2Q8WXH0 6885 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-206ENST00000571409 HIST1H4AP62805 103 aaKnown RBP13.7□□□□□ -0.22
CTDNEP1-206ENST00000571409 KRTAP3-3Q9BYR6 98 aa13.7□□□□□ -0.22
CTDNEP1-206ENST00000571409 SPRR2GQ9BYE4 73 aa13.65□□□□□ -0.22
CTDNEP1-206ENST00000571409 A0A087WVE0 104 aa13.63□□□□□ -0.23
CTDNEP1-206ENST00000571409 UQCRQO14949 82 aa13.62□□□□□ -0.23
CTDNEP1-206ENST00000571409 MT1BP07438 61 aa13.62□□□□□ -0.23
CTDNEP1-206ENST00000571409 KLKP1Q107X0 134 aa13.61□□□□□ -0.23
CTDNEP1-206ENST00000571409 Q5VV11 94 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 269.8 ms