RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 WFDC13Q8IUB5 93 aa10.09□□□□□ -0.79
RPAIN-208ENST00000571043 CYSTM1Q9H1C7 97 aa10.09□□□□□ -0.79
RPAIN-208ENST00000571043 CASC2Q6XLA1 102 aa10.08□□□□□ -0.8
RPAIN-208ENST00000571043 Q5XG85 94 aa10.07□□□□□ -0.8
RPAIN-208ENST00000571043 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
RPAIN-208ENST00000571043 MMP24-AS1A0A0U1RRL7 71 aa10.06□□□□□ -0.8
RPAIN-208ENST00000571043 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
RPAIN-208ENST00000571043 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
RPAIN-208ENST00000571043 A0A1B0GVX0 72 aa10.05□□□□□ -0.8
RPAIN-208ENST00000571043 TMEM258P61165 79 aa10.04□□□□□ -0.8
RPAIN-208ENST00000571043 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
RPAIN-208ENST00000571043 MYCBP2O75592 4640 aa10.03□□□□□ -0.8
RPAIN-208ENST00000571043 C8orf17Q9NRJ1 99 aa10.02□□□□□ -0.8
RPAIN-208ENST00000571043 SNURFQ9Y675 71 aa10.02□□□□□ -0.8
RPAIN-208ENST00000571043 A0A0U1RQV1 116 aa10.02□□□□□ -0.81
RPAIN-208ENST00000571043 NDUFC1O43677 76 aa10.02□□□□□ -0.81
RPAIN-208ENST00000571043 hDV103S1A0JD37 113 aa10.01□□□□□ -0.81
RPAIN-208ENST00000571043 C5orf47Q569G3 176 aa10.01□□□□□ -0.81
RPAIN-208ENST00000571043 TYMSOSQ8TAI1 123 aa10.01□□□□□ -0.81
RPAIN-208ENST00000571043 TNXBP22105 4242 aa9.99□□□□□ -0.81
RPAIN-208ENST00000571043 IGHV6-1A0A0B4J1U7 121 aa9.99□□□□□ -0.81
RPAIN-208ENST00000571043 H7BZZ5 65 aa9.99□□□□□ -0.81
RPAIN-208ENST00000571043 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
RPAIN-208ENST00000571043 C4orf48Q5BLP8 95 aa9.97□□□□□ -0.81
RPAIN-208ENST00000571043 PCLOQ9Y6V0 5065 aa9.95□□□□□ -0.82
RPAIN-208ENST00000571043 SPINK1P00995 79 aa9.94□□□□□ -0.82
RPAIN-208ENST00000571043 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
RPAIN-208ENST00000571043 PRR26Q8N8Z3 221 aa9.93□□□□□ -0.82
RPAIN-208ENST00000571043 C8orf87E5RJ46 101 aa9.92□□□□□ -0.82
RPAIN-208ENST00000571043 OXTP01178 125 aa9.92□□□□□ -0.82
RPAIN-208ENST00000571043 MP68P56378 58 aa9.92□□□□□ -0.82
RPAIN-208ENST00000571043 ZCCHC13Q8WW36 166 aaKnown RBP9.92□□□□□ -0.82
RPAIN-208ENST00000571043 TP53AIP1Q9HCN2 124 aa9.92□□□□□ -0.82
RPAIN-208ENST00000571043 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
RPAIN-208ENST00000571043 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
RPAIN-208ENST00000571043 MRPL34Q9BQ48 92 aaKnown RBP9.91□□□□□ -0.82
RPAIN-208ENST00000571043 KRTAP10-8P60410 259 aa9.9□□□□□ -0.82
RPAIN-208ENST00000571043 H3BPC8 53 aa9.89□□□□□ -0.83
RPAIN-208ENST00000571043 NOTCH2NLQ7Z3S9 236 aa9.89□□□□□ -0.83
RPAIN-208ENST00000571043 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
RPAIN-208ENST00000571043 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
RPAIN-208ENST00000571043 LINC00304Q8N9R0 145 aa9.88□□□□□ -0.83
RPAIN-208ENST00000571043 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-208ENST00000571043 H0Y9P7 68 aa9.86□□□□□ -0.83
RPAIN-208ENST00000571043 MT1HL1P0DM35 61 aa9.85□□□□□ -0.83
RPAIN-208ENST00000571043 ATP5EP56381 51 aaPredicted RBP9.84□□□□□ -0.83
RPAIN-208ENST00000571043 RPS28P62857 69 aaKnown RBP9.84□□□□□ -0.83
RPAIN-208ENST00000571043 TRAV22A0A0B4J277 110 aa9.83□□□□□ -0.84
RPAIN-208ENST00000571043 NDUFS5O43920 106 aa9.82□□□□□ -0.84
RPAIN-208ENST00000571043 LINC00313P59037 77 aa9.82□□□□□ -0.84
RPAIN-208ENST00000571043 LINC00208Q96KT6 92 aa9.82□□□□□ -0.84
RPAIN-208ENST00000571043 C1orf64Q8NEQ6 169 aa9.77□□□□□ -0.84
RPAIN-208ENST00000571043 J3QL48 77 aa9.74□□□□□ -0.85
RPAIN-208ENST00000571043 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
RPAIN-208ENST00000571043 SERP1Q9Y6X1 66 aa9.73□□□□□ -0.85
RPAIN-208ENST00000571043 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
RPAIN-208ENST00000571043 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
RPAIN-208ENST00000571043 SPANXA2-OT1Q8N9U9 137 aa9.67□□□□□ -0.86
RPAIN-208ENST00000571043 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
RPAIN-208ENST00000571043 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
RPAIN-208ENST00000571043 Q5W150 140 aa9.66□□□□□ -0.86
RPAIN-208ENST00000571043 CYP4F30PQ9H0H9 118 aa9.65□□□□□ -0.86
RPAIN-208ENST00000571043 LOC101927531A0A1B0GV80 90 aa9.64□□□□□ -0.87
RPAIN-208ENST00000571043 HERC1Q15751 4861 aa9.61□□□□□ -0.87
RPAIN-208ENST00000571043 IGLV7-46A0A075B6I9 117 aa9.57□□□□□ -0.88
RPAIN-208ENST00000571043 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
RPAIN-208ENST00000571043 PRR4Q16378 134 aa9.54□□□□□ -0.88
RPAIN-208ENST00000571043 SMIM26A0A096LP01 95 aa9.51□□□□□ -0.89
RPAIN-208ENST00000571043 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
RPAIN-208ENST00000571043 RETNLBQ9BQ08 111 aa9.5□□□□□ -0.89
RPAIN-208ENST00000571043 C20orf166-AS1Q96NR2 134 aa9.48□□□□□ -0.89
RPAIN-208ENST00000571043 A8MUU9 505 aa9.46□□□□□ -0.89
RPAIN-208ENST00000571043 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
RPAIN-208ENST00000571043 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
RPAIN-208ENST00000571043 HMCN2Q8NDA2 5059 aa9.41□□□□□ -0.9
RPAIN-208ENST00000571043 HRES1P13985 223 aa9.4□□□□□ -0.91
RPAIN-208ENST00000571043 IGKV2D-30A0A075B6S6 120 aa9.37□□□□□ -0.91
RPAIN-208ENST00000571043 Q75L30 129 aa9.36□□□□□ -0.91
RPAIN-208ENST00000571043 COA5Q86WW8 74 aa9.36□□□□□ -0.91
RPAIN-208ENST00000571043 C7orf65Q6ZTY9 151 aa9.35□□□□□ -0.91
RPAIN-208ENST00000571043 LPAP08519 4548 aa9.33□□□□□ -0.92
RPAIN-208ENST00000571043 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
RPAIN-208ENST00000571043 ACYP2P14621 99 aa9.3□□□□□ -0.92
RPAIN-208ENST00000571043 C4orf26Q17RF5 130 aa9.29□□□□□ -0.92
RPAIN-208ENST00000571043 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
RPAIN-208ENST00000571043 Q1T7F1 81 aa9.27□□□□□ -0.93
RPAIN-208ENST00000571043 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
RPAIN-208ENST00000571043 LRP2P98164 4655 aa9.25□□□□□ -0.93
RPAIN-208ENST00000571043 V9GYY9 64 aa9.24□□□□□ -0.93
RPAIN-208ENST00000571043 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
RPAIN-208ENST00000571043 XP32Q5T750 250 aa9.2□□□□□ -0.94
RPAIN-208ENST00000571043 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
RPAIN-208ENST00000571043 SPINK7P58062 85 aa9.18□□□□□ -0.94
RPAIN-208ENST00000571043 A8MUN3 132 aa9.16□□□□□ -0.94
RPAIN-208ENST00000571043 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
RPAIN-208ENST00000571043 LINC01558Q9Y6Z2 57 aa9.08□□□□□ -0.96
RPAIN-208ENST00000571043 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
RPAIN-208ENST00000571043 PSPHP1O15172 72 aa9.05□□□□□ -0.96
RPAIN-208ENST00000571043 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
RPAIN-208ENST00000571043 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms