RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 VPS25Q9BRG1 176 aa4.23□□□□□ -1.73
CTDNEP1-203ENST00000570385 VAMP8Q9BV40 100 aa4.23□□□□□ -1.73
CTDNEP1-203ENST00000570385 ORMDL1Q9P0S3 153 aa4.23□□□□□ -1.73
CTDNEP1-203ENST00000570385 K7ERJ3 54 aa4.22□□□□□ -1.73
CTDNEP1-203ENST00000570385 TRACP01848 142 aa4.22□□□□□ -1.73
CTDNEP1-203ENST00000570385 S100A1P23297 94 aa4.22□□□□□ -1.73
CTDNEP1-203ENST00000570385 PSMB2P49721 201 aa4.22□□□□□ -1.73
CTDNEP1-203ENST00000570385 TMEM256-PLSCR3K7ERE1 68 aa4.2□□□□□ -1.74
CTDNEP1-203ENST00000570385 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
CTDNEP1-203ENST00000570385 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
CTDNEP1-203ENST00000570385 A0A1B0GVX0 72 aa4.19□□□□□ -1.74
CTDNEP1-203ENST00000570385 SPINK7P58062 85 aa4.19□□□□□ -1.74
CTDNEP1-203ENST00000570385 MTURNQ8N3F0 131 aa4.18□□□□□ -1.74
CTDNEP1-203ENST00000570385 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
CTDNEP1-203ENST00000570385 C8orf87E5RJ46 101 aa4.17□□□□□ -1.74
CTDNEP1-203ENST00000570385 H3BQ85 93 aa4.17□□□□□ -1.74
CTDNEP1-203ENST00000570385 COX6CP09669 75 aa4.17□□□□□ -1.74
CTDNEP1-203ENST00000570385 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
CTDNEP1-203ENST00000570385 RBM3P98179 157 aaKnown RBP4.15□□□□□ -1.75
CTDNEP1-203ENST00000570385 HSD52Q0P140 79 aa4.15□□□□□ -1.75
CTDNEP1-203ENST00000570385 SCGB1C2P0DMR2 95 aa4.14□□□□□ -1.75
CTDNEP1-203ENST00000570385 LYRM7Q5U5X0 104 aa4.14□□□□□ -1.75
CTDNEP1-203ENST00000570385 WFDC13Q8IUB5 93 aa4.14□□□□□ -1.75
CTDNEP1-203ENST00000570385 DSCR8Q96T75 97 aa4.14□□□□□ -1.75
CTDNEP1-203ENST00000570385 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
CTDNEP1-203ENST00000570385 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
CTDNEP1-203ENST00000570385 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
CTDNEP1-203ENST00000570385 C9JAW5 83 aa4.12□□□□□ -1.75
CTDNEP1-203ENST00000570385 LINC00846Q9NV44 126 aa4.12□□□□□ -1.75
CTDNEP1-203ENST00000570385 A8MWP4 228 aa4.11□□□□□ -1.75
CTDNEP1-203ENST00000570385 J3KT08 172 aa4.11□□□□□ -1.75
CTDNEP1-203ENST00000570385 NDUFB1O75438 58 aa4.11□□□□□ -1.75
CTDNEP1-203ENST00000570385 BAALC-AS2P0C853 105 aa4.11□□□□□ -1.75
CTDNEP1-203ENST00000570385 PYY3Q5JQD4 70 aa4.11□□□□□ -1.75
CTDNEP1-203ENST00000570385 Q6ZQT0 140 aa4.11□□□□□ -1.75
CTDNEP1-203ENST00000570385 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
CTDNEP1-203ENST00000570385 IGKV3D-7A0A0C4DH55 119 aa4.08□□□□□ -1.76
CTDNEP1-203ENST00000570385 Q6ZVQ6 151 aa4.07□□□□□ -1.76
CTDNEP1-203ENST00000570385 UQCR10Q9UDW1 63 aa4.07□□□□□ -1.76
CTDNEP1-203ENST00000570385 NAA38Q9BRA0 125 aaKnown RBP4.06□□□□□ -1.76
CTDNEP1-203ENST00000570385 H1FX-AS1Q4G0G2 97 aa4.04□□□□□ -1.76
CTDNEP1-203ENST00000570385 C14orf132Q9NPU4 83 aa4.04□□□□□ -1.76
CTDNEP1-203ENST00000570385 LOC110117498A0A087WWA1 95 aa4.03□□□□□ -1.76
CTDNEP1-203ENST00000570385 NDUFS5O43920 106 aa4.03□□□□□ -1.76
CTDNEP1-203ENST00000570385 PRR15Q8IV56 129 aa4.03□□□□□ -1.76
CTDNEP1-203ENST00000570385 JMJD7-PLA2G4BH0Y9G9 81 aa4.02□□□□□ -1.77
CTDNEP1-203ENST00000570385 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
CTDNEP1-203ENST00000570385 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
CTDNEP1-203ENST00000570385 MRPL34Q9BQ48 92 aaKnown RBP4.02□□□□□ -1.77
CTDNEP1-203ENST00000570385 IGKV2D-30A0A075B6S6 120 aa4.01□□□□□ -1.77
CTDNEP1-203ENST00000570385 MMP24-AS1A0A0U1RRL7 71 aa4.01□□□□□ -1.77
CTDNEP1-203ENST00000570385 IGKV2-30P06310 120 aa4.01□□□□□ -1.77
CTDNEP1-203ENST00000570385 NREPQ16612 68 aa4.01□□□□□ -1.77
CTDNEP1-203ENST00000570385 TMEM254Q8TBM7 123 aa4□□□□□ -1.77
CTDNEP1-203ENST00000570385 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
CTDNEP1-203ENST00000570385 K7EQZ3 153 aa3.99□□□□□ -1.77
CTDNEP1-203ENST00000570385 PDE6GP18545 87 aa3.99□□□□□ -1.77
CTDNEP1-203ENST00000570385 A0A1B0GW54 56 aa3.98□□□□□ -1.77
CTDNEP1-203ENST00000570385 Q5W150 140 aa3.98□□□□□ -1.77
CTDNEP1-203ENST00000570385 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
CTDNEP1-203ENST00000570385 NEBP20929 6669 aa3.96□□□□□ -1.78
CTDNEP1-203ENST00000570385 M0R143 59 aa3.95□□□□□ -1.78
CTDNEP1-203ENST00000570385 C4orf26Q17RF5 130 aa3.95□□□□□ -1.78
CTDNEP1-203ENST00000570385 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
CTDNEP1-203ENST00000570385 C5orf47Q569G3 176 aa3.94□□□□□ -1.78
CTDNEP1-203ENST00000570385 Q8N9L7 120 aa3.94□□□□□ -1.78
CTDNEP1-203ENST00000570385 FAM236AA0A1B0GUQ0 79 aa3.93□□□□□ -1.78
CTDNEP1-203ENST00000570385 FAM236BA0A1B0GV22 79 aa3.93□□□□□ -1.78
CTDNEP1-203ENST00000570385 BPY2O14599 106 aa3.93□□□□□ -1.78
CTDNEP1-203ENST00000570385 LCE3BQ5TA77 95 aa3.93□□□□□ -1.78
CTDNEP1-203ENST00000570385 A6NN06 94 aa3.92□□□□□ -1.78
CTDNEP1-203ENST00000570385 HCG22E2RYF7 251 aa3.92□□□□□ -1.78
CTDNEP1-203ENST00000570385 MT1BP07438 61 aa3.9□□□□□ -1.79
CTDNEP1-203ENST00000570385 BATFQ16520 125 aa3.9□□□□□ -1.79
CTDNEP1-203ENST00000570385 CASC2Q6XLA1 102 aa3.9□□□□□ -1.79
CTDNEP1-203ENST00000570385 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
CTDNEP1-203ENST00000570385 TSTD3H0UI37 97 aa3.87□□□□□ -1.79
CTDNEP1-203ENST00000570385 Q5VV11 94 aa3.87□□□□□ -1.79
CTDNEP1-203ENST00000570385 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
CTDNEP1-203ENST00000570385 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
CTDNEP1-203ENST00000570385 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
CTDNEP1-203ENST00000570385 H3BT86 120 aa3.86□□□□□ -1.79
CTDNEP1-203ENST00000570385 S4R3F8 94 aa3.86□□□□□ -1.79
CTDNEP1-203ENST00000570385 CXCL6P80162 114 aa3.85□□□□□ -1.79
CTDNEP1-203ENST00000570385 CSAG1Q6PB30 78 aa3.85□□□□□ -1.79
CTDNEP1-203ENST00000570385 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
CTDNEP1-203ENST00000570385 LCA10Q71F78 164 aa3.84□□□□□ -1.79
CTDNEP1-203ENST00000570385 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.79
CTDNEP1-203ENST00000570385 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
CTDNEP1-203ENST00000570385 C9orf118A6NHY6 69 aa3.83□□□□□ -1.8
CTDNEP1-203ENST00000570385 A0A1W2PPM0 123 aa3.82□□□□□ -1.8
CTDNEP1-203ENST00000570385 TAX1BP3O14907 124 aa3.82□□□□□ -1.8
CTDNEP1-203ENST00000570385 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
CTDNEP1-203ENST00000570385 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
CTDNEP1-203ENST00000570385 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
CTDNEP1-203ENST00000570385 SMIM6P0DI80 62 aa3.79□□□□□ -1.8
CTDNEP1-203ENST00000570385 KLKP1Q107X0 134 aa3.79□□□□□ -1.8
CTDNEP1-203ENST00000570385 IMUPQ9GZP8 106 aa3.78□□□□□ -1.8
CTDNEP1-203ENST00000570385 UBL5Q9BZL1 73 aa3.77□□□□□ -1.81
CTDNEP1-203ENST00000570385 SPCS1Q9Y6A9 102 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms