RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 HIST1H4AP62805 103 aaKnown RBP5.67□□□□□ -1.5
RBFOX1-220ENST00000570188 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
RBFOX1-220ENST00000570188 RYR1P21817 5038 aa5.66□□□□□ -1.5
RBFOX1-220ENST00000570188 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
RBFOX1-220ENST00000570188 SCGB1A1P11684 91 aa5.65□□□□□ -1.5
RBFOX1-220ENST00000570188 A0A087WVE0 104 aa5.64□□□□□ -1.51
RBFOX1-220ENST00000570188 DEFB116Q30KQ4 102 aa5.64□□□□□ -1.51
RBFOX1-220ENST00000570188 LINC00472Q9H8W2 130 aa5.64□□□□□ -1.51
RBFOX1-220ENST00000570188 Q8N9L7 120 aa5.63□□□□□ -1.51
RBFOX1-220ENST00000570188 FAM236AA0A1B0GUQ0 79 aa5.62□□□□□ -1.51
RBFOX1-220ENST00000570188 FAM236BA0A1B0GV22 79 aa5.62□□□□□ -1.51
RBFOX1-220ENST00000570188 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
RBFOX1-220ENST00000570188 DSCR10P59022 87 aa5.62□□□□□ -1.51
RBFOX1-220ENST00000570188 Q96NJ1 140 aa5.62□□□□□ -1.51
RBFOX1-220ENST00000570188 J3KT08 172 aa5.61□□□□□ -1.51
RBFOX1-220ENST00000570188 LINC00304Q8N9R0 145 aa5.61□□□□□ -1.51
RBFOX1-220ENST00000570188 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
RBFOX1-220ENST00000570188 KRTAP17-1Q9BYP8 105 aa5.61□□□□□ -1.51
RBFOX1-220ENST00000570188 K7EQZ3 153 aa5.6□□□□□ -1.51
RBFOX1-220ENST00000570188 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
RBFOX1-220ENST00000570188 SPINK1P00995 79 aa5.59□□□□□ -1.51
RBFOX1-220ENST00000570188 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
RBFOX1-220ENST00000570188 Q5XG85 94 aa5.59□□□□□ -1.51
RBFOX1-220ENST00000570188 Q8N9P0 234 aaPredicted RBP5.59□□□□□ -1.51
RBFOX1-220ENST00000570188 A8MWP4 228 aa5.58□□□□□ -1.52
RBFOX1-220ENST00000570188 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
RBFOX1-220ENST00000570188 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
RBFOX1-220ENST00000570188 NDUFB1O75438 58 aa5.56□□□□□ -1.52
RBFOX1-220ENST00000570188 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
RBFOX1-220ENST00000570188 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
RBFOX1-220ENST00000570188 ATOX1O00244 68 aa5.55□□□□□ -1.52
RBFOX1-220ENST00000570188 RPS29P62273 56 aaKnown RBP5.55□□□□□ -1.52
RBFOX1-220ENST00000570188 C1orf195Q5TG92 126 aa5.54□□□□□ -1.52
RBFOX1-220ENST00000570188 ANAPC13Q9BS18 74 aa5.54□□□□□ -1.52
RBFOX1-220ENST00000570188 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
RBFOX1-220ENST00000570188 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
RBFOX1-220ENST00000570188 HCG22E2RYF7 251 aa5.53□□□□□ -1.52
RBFOX1-220ENST00000570188 KRTAP10-8P60410 259 aa5.53□□□□□ -1.52
RBFOX1-220ENST00000570188 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
RBFOX1-220ENST00000570188 IGHV6-1A0A0B4J1U7 121 aa5.52□□□□□ -1.53
RBFOX1-220ENST00000570188 WFDC13Q8IUB5 93 aa5.52□□□□□ -1.53
RBFOX1-220ENST00000570188 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
RBFOX1-220ENST00000570188 TNXBP22105 4242 aa5.52□□□□□ -1.53
RBFOX1-220ENST00000570188 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
RBFOX1-220ENST00000570188 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
RBFOX1-220ENST00000570188 CASC2Q6XLA1 102 aa5.5□□□□□ -1.53
RBFOX1-220ENST00000570188 C8orf17Q9NRJ1 99 aa5.5□□□□□ -1.53
RBFOX1-220ENST00000570188 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
RBFOX1-220ENST00000570188 KRTAP29-1A8MX34 341 aaPredicted RBP5.48□□□□□ -1.53
RBFOX1-220ENST00000570188 SMIM20Q8N5G0 67 aa5.48□□□□□ -1.53
RBFOX1-220ENST00000570188 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
RBFOX1-220ENST00000570188 hDV103S1A0JD37 113 aa5.47□□□□□ -1.53
RBFOX1-220ENST00000570188 C8orf87E5RJ46 101 aa5.47□□□□□ -1.53
RBFOX1-220ENST00000570188 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
RBFOX1-220ENST00000570188 BIRC6Q9NR09 4857 aa5.46□□□□□ -1.53
RBFOX1-220ENST00000570188 OXTP01178 125 aa5.46□□□□□ -1.54
RBFOX1-220ENST00000570188 NOTCH2NLQ7Z3S9 236 aa5.46□□□□□ -1.54
RBFOX1-220ENST00000570188 SERP2Q8N6R1 65 aa5.46□□□□□ -1.54
RBFOX1-220ENST00000570188 TRAV7A0A075B6U4 112 aa5.45□□□□□ -1.54
RBFOX1-220ENST00000570188 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
RBFOX1-220ENST00000570188 TMEM254Q8TBM7 123 aa5.45□□□□□ -1.54
RBFOX1-220ENST00000570188 RETNLBQ9BQ08 111 aa5.45□□□□□ -1.54
RBFOX1-220ENST00000570188 COX7CP15954 63 aa5.44□□□□□ -1.54
RBFOX1-220ENST00000570188 LINC00313P59037 77 aa5.44□□□□□ -1.54
RBFOX1-220ENST00000570188 OCR1Q9BZK8 76 aa5.44□□□□□ -1.54
RBFOX1-220ENST00000570188 MRPL34Q9BQ48 92 aaKnown RBP5.43□□□□□ -1.54
RBFOX1-220ENST00000570188 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
RBFOX1-220ENST00000570188 UQCRQO14949 82 aa5.42□□□□□ -1.54
RBFOX1-220ENST00000570188 NDUFS5O43920 106 aa5.41□□□□□ -1.54
RBFOX1-220ENST00000570188 HERC2O95714 4834 aa5.4□□□□□ -1.55
RBFOX1-220ENST00000570188 MYCBP2O75592 4640 aa5.39□□□□□ -1.55
RBFOX1-220ENST00000570188 KRTAP16-1A8MUX0 517 aa5.38□□□□□ -1.55
RBFOX1-220ENST00000570188 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
RBFOX1-220ENST00000570188 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
RBFOX1-220ENST00000570188 C9orf92A6NGG3 77 aa5.36□□□□□ -1.55
RBFOX1-220ENST00000570188 C20orf197Q8N268 126 aa5.36□□□□□ -1.55
RBFOX1-220ENST00000570188 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
RBFOX1-220ENST00000570188 H0Y9P7 68 aa5.35□□□□□ -1.55
RBFOX1-220ENST00000570188 MP68P56378 58 aa5.34□□□□□ -1.55
RBFOX1-220ENST00000570188 C5orf47Q569G3 176 aa5.34□□□□□ -1.55
RBFOX1-220ENST00000570188 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
RBFOX1-220ENST00000570188 TRAV22A0A0B4J277 110 aa5.33□□□□□ -1.56
RBFOX1-220ENST00000570188 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
RBFOX1-220ENST00000570188 ABCA13Q86UQ4 5058 aa5.32□□□□□ -1.56
RBFOX1-220ENST00000570188 A0A0U1RQV1 116 aa5.31□□□□□ -1.56
RBFOX1-220ENST00000570188 KLKP1Q107X0 134 aa5.31□□□□□ -1.56
RBFOX1-220ENST00000570188 PRR4Q16378 134 aa5.31□□□□□ -1.56
RBFOX1-220ENST00000570188 LINC00208Q96KT6 92 aa5.3□□□□□ -1.56
RBFOX1-220ENST00000570188 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
RBFOX1-220ENST00000570188 H3BPC8 53 aa5.29□□□□□ -1.56
RBFOX1-220ENST00000570188 A8MUU9 505 aa5.28□□□□□ -1.56
RBFOX1-220ENST00000570188 Q5W150 140 aa5.28□□□□□ -1.56
RBFOX1-220ENST00000570188 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
RBFOX1-220ENST00000570188 C20orf166-AS1Q96NR2 134 aa5.28□□□□□ -1.56
RBFOX1-220ENST00000570188 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
RBFOX1-220ENST00000570188 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
RBFOX1-220ENST00000570188 C1orf64Q8NEQ6 169 aa5.27□□□□□ -1.57
RBFOX1-220ENST00000570188 NDUFC1O43677 76 aa5.26□□□□□ -1.57
RBFOX1-220ENST00000570188 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
RBFOX1-220ENST00000570188 H7BZZ5 65 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms