RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 IGKV4-1P06312 121 aa3.65□□□□□ -1.83
CYLD-216ENST00000569891 C8orf87E5RJ46 101 aa3.64□□□□□ -1.83
CYLD-216ENST00000569891 ATP5EP56381 51 aaPredicted RBP3.64□□□□□ -1.83
CYLD-216ENST00000569891 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
CYLD-216ENST00000569891 H3BPC8 53 aa3.64□□□□□ -1.83
CYLD-216ENST00000569891 C5orf47Q569G3 176 aa3.64□□□□□ -1.83
CYLD-216ENST00000569891 PRR15Q8IV56 129 aa3.64□□□□□ -1.83
CYLD-216ENST00000569891 CASC2Q6XLA1 102 aa3.64□□□□□ -1.83
CYLD-216ENST00000569891 FAM30AQ9NZY2 134 aa3.63□□□□□ -1.83
CYLD-216ENST00000569891 TMEM258P61165 79 aa3.63□□□□□ -1.83
CYLD-216ENST00000569891 ASB16-AS1Q495Z4 193 aa3.63□□□□□ -1.83
CYLD-216ENST00000569891 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
CYLD-216ENST00000569891 SPINK1P00995 79 aa3.62□□□□□ -1.83
CYLD-216ENST00000569891 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
CYLD-216ENST00000569891 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
CYLD-216ENST00000569891 Q5XG85 94 aa3.61□□□□□ -1.83
CYLD-216ENST00000569891 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
CYLD-216ENST00000569891 K7EQZ3 153 aa3.61□□□□□ -1.83
CYLD-216ENST00000569891 DSCR10P59022 87 aa3.61□□□□□ -1.83
CYLD-216ENST00000569891 CCDC179H3BU77 68 aa3.61□□□□□ -1.83
CYLD-216ENST00000569891 C20orf197Q8N268 126 aa3.61□□□□□ -1.83
CYLD-216ENST00000569891 A0A1B0GVX0 72 aa3.6□□□□□ -1.83
CYLD-216ENST00000569891 hDV103S1A0JD37 113 aa3.6□□□□□ -1.83
CYLD-216ENST00000569891 WFDC13Q8IUB5 93 aa3.6□□□□□ -1.83
CYLD-216ENST00000569891 Q8N9L7 120 aa3.59□□□□□ -1.83
CYLD-216ENST00000569891 TMEM254Q8TBM7 123 aa3.59□□□□□ -1.83
CYLD-216ENST00000569891 SEC61GP60059 68 aa3.59□□□□□ -1.84
CYLD-216ENST00000569891 KLKP1Q107X0 134 aa3.59□□□□□ -1.84
CYLD-216ENST00000569891 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.84
CYLD-216ENST00000569891 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
CYLD-216ENST00000569891 A0A1B0GVY2 172 aa3.58□□□□□ -1.84
CYLD-216ENST00000569891 C8orf17Q9NRJ1 99 aa3.58□□□□□ -1.84
CYLD-216ENST00000569891 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
CYLD-216ENST00000569891 OCR1Q9BZK8 76 aa3.57□□□□□ -1.84
CYLD-216ENST00000569891 MRPL34Q9BQ48 92 aaKnown RBP3.57□□□□□ -1.84
CYLD-216ENST00000569891 A0A0G2JQZ4 141 aa3.56□□□□□ -1.84
CYLD-216ENST00000569891 FAM236DA0A1B0GTK5 79 aa3.56□□□□□ -1.84
CYLD-216ENST00000569891 FAM236CP0DP71 79 aa3.56□□□□□ -1.84
CYLD-216ENST00000569891 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
CYLD-216ENST00000569891 LINC00313P59037 77 aa3.56□□□□□ -1.84
CYLD-216ENST00000569891 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
CYLD-216ENST00000569891 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
CYLD-216ENST00000569891 H0Y9P7 68 aa3.55□□□□□ -1.84
CYLD-216ENST00000569891 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
CYLD-216ENST00000569891 SMR3BP02814 79 aaPredicted RBP3.53□□□□□ -1.84
CYLD-216ENST00000569891 KRTAP29-1A8MX34 341 aaPredicted RBP3.53□□□□□ -1.84
CYLD-216ENST00000569891 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.84
CYLD-216ENST00000569891 A0A0U1RQV1 116 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 SNURFQ9Y675 71 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 LINC00208Q96KT6 92 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 Q96NJ1 140 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 A0A087X002 238 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 KRTAP13-2Q52LG2 175 aa3.52□□□□□ -1.85
CYLD-216ENST00000569891 SERP1Q9Y6X1 66 aa3.51□□□□□ -1.85
CYLD-216ENST00000569891 C1orf64Q8NEQ6 169 aa3.51□□□□□ -1.85
CYLD-216ENST00000569891 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
CYLD-216ENST00000569891 PRR26Q8N8Z3 221 aa3.5□□□□□ -1.85
CYLD-216ENST00000569891 K7ERS5 55 aa3.5□□□□□ -1.85
CYLD-216ENST00000569891 Q5VSD8 79 aa3.49□□□□□ -1.85
CYLD-216ENST00000569891 SPANXA2-OT1Q8N9U9 137 aa3.49□□□□□ -1.85
CYLD-216ENST00000569891 H7BZZ5 65 aa3.49□□□□□ -1.85
CYLD-216ENST00000569891 FP248Q71RG6 208 aaPredicted RBP3.48□□□□□ -1.85
CYLD-216ENST00000569891 V9GYY9 64 aa3.46□□□□□ -1.86
CYLD-216ENST00000569891 OXTP01178 125 aa3.45□□□□□ -1.86
CYLD-216ENST00000569891 Q8N1X5 172 aa3.45□□□□□ -1.86
CYLD-216ENST00000569891 SMIM26A0A096LP01 95 aa3.45□□□□□ -1.86
CYLD-216ENST00000569891 SPTSSBQ8NFR3 76 aa3.45□□□□□ -1.86
CYLD-216ENST00000569891 ZCCHC13Q8WW36 166 aaKnown RBP3.45□□□□□ -1.86
CYLD-216ENST00000569891 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
CYLD-216ENST00000569891 CYP4F30PQ9H0H9 118 aa3.44□□□□□ -1.86
CYLD-216ENST00000569891 PRR15LQ9BU68 103 aa3.44□□□□□ -1.86
CYLD-216ENST00000569891 PRR4Q16378 134 aa3.43□□□□□ -1.86
CYLD-216ENST00000569891 IGLV7-46A0A075B6I9 117 aa3.41□□□□□ -1.86
CYLD-216ENST00000569891 C7orf65Q6ZTY9 151 aa3.41□□□□□ -1.86
CYLD-216ENST00000569891 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
CYLD-216ENST00000569891 RETNLBQ9BQ08 111 aa3.41□□□□□ -1.86
CYLD-216ENST00000569891 ACYP2P14621 99 aa3.41□□□□□ -1.86
CYLD-216ENST00000569891 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.86
CYLD-216ENST00000569891 PCOTHQ58A44 107 aa3.4□□□□□ -1.87
CYLD-216ENST00000569891 MPLKIPQ8TAP9 179 aa3.4□□□□□ -1.87
CYLD-216ENST00000569891 ATP11AUNQ6ZP68 121 aa3.39□□□□□ -1.87
CYLD-216ENST00000569891 USH2AO75445 5202 aa3.39□□□□□ -1.87
CYLD-216ENST00000569891 A8MUN3 132 aa3.38□□□□□ -1.87
CYLD-216ENST00000569891 IGKV2-30P06310 120 aa3.38□□□□□ -1.87
CYLD-216ENST00000569891 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
CYLD-216ENST00000569891 Q5W150 140 aa3.38□□□□□ -1.87
CYLD-216ENST00000569891 IGKV2D-30A0A075B6S6 120 aa3.38□□□□□ -1.87
CYLD-216ENST00000569891 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
CYLD-216ENST00000569891 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
CYLD-216ENST00000569891 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
CYLD-216ENST00000569891 Q75L30 129 aa3.37□□□□□ -1.87
CYLD-216ENST00000569891 C20orf166-AS1Q96NR2 134 aa3.37□□□□□ -1.87
CYLD-216ENST00000569891 A6NED7 52 aa3.36□□□□□ -1.87
CYLD-216ENST00000569891 A8MUU9 505 aa3.36□□□□□ -1.87
CYLD-216ENST00000569891 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
CYLD-216ENST00000569891 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
CYLD-216ENST00000569891 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
CYLD-216ENST00000569891 COA5Q86WW8 74 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms