RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 WFDC13Q8IUB5 93 aa12.92□□□□□ -0.34
VCPKMT-205ENST00000569518 EPPK1P58107 5090 aaKnown RBP12.91□□□□□ -0.34
VCPKMT-205ENST00000569518 C1orf195Q5TG92 126 aa12.91□□□□□ -0.34
VCPKMT-205ENST00000569518 CASC2Q6XLA1 102 aa12.89□□□□□ -0.35
VCPKMT-205ENST00000569518 KIAA1109Q2LD37 5005 aa12.89□□□□□ -0.35
VCPKMT-205ENST00000569518 RPS29P62273 56 aaKnown RBP12.88□□□□□ -0.35
VCPKMT-205ENST00000569518 SPAG11AQ6PDA7 123 aa12.88□□□□□ -0.35
VCPKMT-205ENST00000569518 IGHV6-1A0A0B4J1U7 121 aa12.86□□□□□ -0.35
VCPKMT-205ENST00000569518 C8orf17Q9NRJ1 99 aa12.86□□□□□ -0.35
VCPKMT-205ENST00000569518 Q8N1X5 172 aa12.82□□□□□ -0.36
VCPKMT-205ENST00000569518 hDV103S1A0JD37 113 aa12.81□□□□□ -0.36
VCPKMT-205ENST00000569518 NOTCH2NLQ7Z3S9 236 aa12.81□□□□□ -0.36
VCPKMT-205ENST00000569518 C20orf197Q8N268 126 aa12.76□□□□□ -0.37
VCPKMT-205ENST00000569518 CYSTM1Q9H1C7 97 aa12.75□□□□□ -0.37
VCPKMT-205ENST00000569518 KRTAP10-8P60410 259 aa12.74□□□□□ -0.37
VCPKMT-205ENST00000569518 C8orf87E5RJ46 101 aa12.72□□□□□ -0.37
VCPKMT-205ENST00000569518 TMEM254Q8TBM7 123 aa12.72□□□□□ -0.37
VCPKMT-205ENST00000569518 LRP1Q07954 4544 aaKnown RBP12.72□□□□□ -0.37
VCPKMT-205ENST00000569518 KLKP1Q107X0 134 aa12.7□□□□□ -0.38
VCPKMT-205ENST00000569518 MRPL34Q9BQ48 92 aaKnown RBP12.69□□□□□ -0.38
VCPKMT-205ENST00000569518 TNXBP22105 4242 aa12.69□□□□□ -0.38
VCPKMT-205ENST00000569518 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
VCPKMT-205ENST00000569518 A0A0U1RQV1 116 aa12.65□□□□□ -0.38
VCPKMT-205ENST00000569518 LINC00313P59037 77 aa12.65□□□□□ -0.38
VCPKMT-205ENST00000569518 C5orf47Q569G3 176 aa12.65□□□□□ -0.38
VCPKMT-205ENST00000569518 SNURFQ9Y675 71 aa12.65□□□□□ -0.38
VCPKMT-205ENST00000569518 FAT3Q8TDW7 4589 aa12.65□□□□□ -0.39
VCPKMT-205ENST00000569518 TP53AIP1Q9HCN2 124 aa12.62□□□□□ -0.39
VCPKMT-205ENST00000569518 KRTAP16-1A8MUX0 517 aa12.6□□□□□ -0.39
VCPKMT-205ENST00000569518 NDUFS5O43920 106 aa12.57□□□□□ -0.4
VCPKMT-205ENST00000569518 ZCCHC13Q8WW36 166 aaKnown RBP12.56□□□□□ -0.4
VCPKMT-205ENST00000569518 H7BZZ5 65 aa12.55□□□□□ -0.4
VCPKMT-205ENST00000569518 MT1HL1P0DM35 61 aa12.55□□□□□ -0.4
VCPKMT-205ENST00000569518 TRAV22A0A0B4J277 110 aa12.54□□□□□ -0.4
VCPKMT-205ENST00000569518 H0Y9P7 68 aa12.54□□□□□ -0.4
VCPKMT-205ENST00000569518 MP68P56378 58 aa12.54□□□□□ -0.4
VCPKMT-205ENST00000569518 Q8N9P0 234 aaPredicted RBP12.54□□□□□ -0.4
VCPKMT-205ENST00000569518 MYCBP2O75592 4640 aa12.53□□□□□ -0.4
VCPKMT-205ENST00000569518 RETNLBQ9BQ08 111 aa12.52□□□□□ -0.41
VCPKMT-205ENST00000569518 KRTAP4-5Q9BYR2 181 aa12.52□□□□□ -0.41
VCPKMT-205ENST00000569518 NDUFC1O43677 76 aa12.51□□□□□ -0.41
VCPKMT-205ENST00000569518 H3BPC8 53 aa12.49□□□□□ -0.41
VCPKMT-205ENST00000569518 TMEM258P61165 79 aa12.49□□□□□ -0.41
VCPKMT-205ENST00000569518 LINC00208Q96KT6 92 aa12.47□□□□□ -0.41
VCPKMT-205ENST00000569518 KRTAP13-3Q3SY46 172 aa12.46□□□□□ -0.42
VCPKMT-205ENST00000569518 DMBT1Q9UGM3 2413 aaPredicted RBP12.44□□□□□ -0.42
VCPKMT-205ENST00000569518 OXTP01178 125 aa12.44□□□□□ -0.42
VCPKMT-205ENST00000569518 Q5W150 140 aa12.44□□□□□ -0.42
VCPKMT-205ENST00000569518 C1orf64Q8NEQ6 169 aa12.42□□□□□ -0.42
VCPKMT-205ENST00000569518 BIRC6Q9NR09 4857 aa12.39□□□□□ -0.43
VCPKMT-205ENST00000569518 C9orf92A6NGG3 77 aa12.36□□□□□ -0.43
VCPKMT-205ENST00000569518 FP248Q71RG6 208 aaPredicted RBP12.36□□□□□ -0.43
VCPKMT-205ENST00000569518 FAM236DA0A1B0GTK5 79 aa12.34□□□□□ -0.43
VCPKMT-205ENST00000569518 FAM236CP0DP71 79 aa12.34□□□□□ -0.43
VCPKMT-205ENST00000569518 HERC2O95714 4834 aa12.31□□□□□ -0.44
VCPKMT-205ENST00000569518 C20orf166-AS1Q96NR2 134 aa12.3□□□□□ -0.44
VCPKMT-205ENST00000569518 A8MUU9 505 aa12.29□□□□□ -0.44
VCPKMT-205ENST00000569518 LOC101927531A0A1B0GV80 90 aa12.28□□□□□ -0.44
VCPKMT-205ENST00000569518 ATP5EP56381 51 aaPredicted RBP12.26□□□□□ -0.45
VCPKMT-205ENST00000569518 ABCA13Q86UQ4 5058 aa12.25□□□□□ -0.45
VCPKMT-205ENST00000569518 IGLV7-46A0A075B6I9 117 aa12.23□□□□□ -0.45
VCPKMT-205ENST00000569518 CYP4F30PQ9H0H9 118 aa12.21□□□□□ -0.45
VCPKMT-205ENST00000569518 PCOTHQ58A44 107 aa12.19□□□□□ -0.46
VCPKMT-205ENST00000569518 SPANXA2-OT1Q8N9U9 137 aa12.19□□□□□ -0.46
VCPKMT-205ENST00000569518 IGKV2-30P06310 120 aa12.18□□□□□ -0.46
VCPKMT-205ENST00000569518 Q75L30 129 aa12.17□□□□□ -0.46
VCPKMT-205ENST00000569518 RPS28P62857 69 aaKnown RBP12.13□□□□□ -0.47
VCPKMT-205ENST00000569518 PRR4Q16378 134 aa12.11□□□□□ -0.47
VCPKMT-205ENST00000569518 SERP1Q9Y6X1 66 aa12.1□□□□□ -0.47
VCPKMT-205ENST00000569518 XP32Q5T750 250 aa12.08□□□□□ -0.48
VCPKMT-205ENST00000569518 IGKV2D-30A0A075B6S6 120 aa12.07□□□□□ -0.48
VCPKMT-205ENST00000569518 J3QL48 77 aa12.04□□□□□ -0.48
VCPKMT-205ENST00000569518 RPL37P61927 97 aaKnown RBP12.02□□□□□ -0.48
VCPKMT-205ENST00000569518 HRES1P13985 223 aa12.02□□□□□ -0.49
VCPKMT-205ENST00000569518 TPRXLQ17RH7 258 aa12.02□□□□□ -0.49
VCPKMT-205ENST00000569518 C7orf65Q6ZTY9 151 aa12.02□□□□□ -0.49
VCPKMT-205ENST00000569518 ATP11AUNQ6ZP68 121 aa11.94□□□□□ -0.5
VCPKMT-205ENST00000569518 SPINK7P58062 85 aa11.89□□□□□ -0.51
VCPKMT-205ENST00000569518 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
VCPKMT-205ENST00000569518 COA5Q86WW8 74 aa11.82□□□□□ -0.52
VCPKMT-205ENST00000569518 LPAP08519 4548 aa11.79□□□□□ -0.52
VCPKMT-205ENST00000569518 SMIM26A0A096LP01 95 aa11.79□□□□□ -0.52
VCPKMT-205ENST00000569518 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
VCPKMT-205ENST00000569518 LRP2P98164 4655 aa11.77□□□□□ -0.53
VCPKMT-205ENST00000569518 ACYP2P14621 99 aa11.76□□□□□ -0.53
VCPKMT-205ENST00000569518 C4orf26Q17RF5 130 aa11.76□□□□□ -0.53
VCPKMT-205ENST00000569518 A8MUN3 132 aa11.68□□□□□ -0.54
VCPKMT-205ENST00000569518 KRTAP3-1Q9BYR8 98 aa11.66□□□□□ -0.54
VCPKMT-205ENST00000569518 COX6B2Q6YFQ2 88 aa11.61□□□□□ -0.55
VCPKMT-205ENST00000569518 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
VCPKMT-205ENST00000569518 CHKB-CPT1BH3BT56 60 aa11.56□□□□□ -0.56
VCPKMT-205ENST00000569518 SEC61BP60468 96 aaKnown RBP11.56□□□□□ -0.56
VCPKMT-205ENST00000569518 Q1T7F1 81 aa11.56□□□□□ -0.56
VCPKMT-205ENST00000569518 HERC1Q15751 4861 aa11.54□□□□□ -0.56
VCPKMT-205ENST00000569518 V9GYY9 64 aa11.46□□□□□ -0.58
VCPKMT-205ENST00000569518 HMCN2Q8NDA2 5059 aa11.45□□□□□ -0.58
VCPKMT-205ENST00000569518 MUC17Q685J3 4493 aa11.41□□□□□ -0.58
VCPKMT-205ENST00000569518 KRTAP4-1Q9BYQ7 146 aa11.39□□□□□ -0.59
VCPKMT-205ENST00000569518 LINC01558Q9Y6Z2 57 aa11.39□□□□□ -0.59
VCPKMT-205ENST00000569518 PSPHP1O15172 72 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms