RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 F8W1H4 67 aa5.07□□□□□ -1.6
CHD9-219ENST00000569225 PRO0461Q9UI25 63 aa5.07□□□□□ -1.6
CHD9-219ENST00000569225 SMCPP49901 116 aaPredicted RBP5.07□□□□□ -1.6
CHD9-219ENST00000569225 LRP2P98164 4655 aa5.06□□□□□ -1.6
CHD9-219ENST00000569225 RPS28P62857 69 aaKnown RBP5.04□□□□□ -1.6
CHD9-219ENST00000569225 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
CHD9-219ENST00000569225 C4orf26Q17RF5 130 aa5.03□□□□□ -1.6
CHD9-219ENST00000569225 Q96NJ1 140 aa5.03□□□□□ -1.6
CHD9-219ENST00000569225 C9orf92A6NGG3 77 aa5.03□□□□□ -1.6
CHD9-219ENST00000569225 J3QR89 54 aa5.03□□□□□ -1.6
CHD9-219ENST00000569225 IGKV4-1P06312 121 aa5.03□□□□□ -1.6
CHD9-219ENST00000569225 LINC00472Q9H8W2 130 aa5.03□□□□□ -1.6
CHD9-219ENST00000569225 J3KT08 172 aa5.02□□□□□ -1.61
CHD9-219ENST00000569225 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
CHD9-219ENST00000569225 LPAP08519 4548 aa5.01□□□□□ -1.61
CHD9-219ENST00000569225 NREPQ16612 68 aa5□□□□□ -1.61
CHD9-219ENST00000569225 ETDBQ3ZM63 59 aa5□□□□□ -1.61
CHD9-219ENST00000569225 DEFB116Q30KQ4 102 aa4.99□□□□□ -1.61
CHD9-219ENST00000569225 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
CHD9-219ENST00000569225 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
CHD9-219ENST00000569225 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
CHD9-219ENST00000569225 NDUFB1O75438 58 aa4.98□□□□□ -1.61
CHD9-219ENST00000569225 IGHV6-1A0A0B4J1U7 121 aa4.96□□□□□ -1.62
CHD9-219ENST00000569225 A0A1B0GVX0 72 aa4.96□□□□□ -1.62
CHD9-219ENST00000569225 H3BS24 57 aa4.96□□□□□ -1.62
CHD9-219ENST00000569225 LINC00313P59037 77 aa4.96□□□□□ -1.62
CHD9-219ENST00000569225 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
CHD9-219ENST00000569225 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
CHD9-219ENST00000569225 A8MWP4 228 aa4.94□□□□□ -1.62
CHD9-219ENST00000569225 DSCR10P59022 87 aa4.94□□□□□ -1.62
CHD9-219ENST00000569225 BPY2O14599 106 aa4.94□□□□□ -1.62
CHD9-219ENST00000569225 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
CHD9-219ENST00000569225 Q6ZVQ6 151 aa4.94□□□□□ -1.62
CHD9-219ENST00000569225 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
CHD9-219ENST00000569225 Q75L30 129 aa4.92□□□□□ -1.62
CHD9-219ENST00000569225 LINC00846Q9NV44 126 aa4.92□□□□□ -1.62
CHD9-219ENST00000569225 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
CHD9-219ENST00000569225 ACYP1P07311 99 aa4.91□□□□□ -1.62
CHD9-219ENST00000569225 RNF213Q63HN8 5207 aa4.9□□□□□ -1.62
CHD9-219ENST00000569225 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.62
CHD9-219ENST00000569225 PRR15Q8IV56 129 aa4.9□□□□□ -1.62
CHD9-219ENST00000569225 C20orf166-AS1Q96NR2 134 aa4.9□□□□□ -1.62
CHD9-219ENST00000569225 PCOTHQ58A44 107 aa4.9□□□□□ -1.63
CHD9-219ENST00000569225 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
CHD9-219ENST00000569225 A8MUU9 505 aa4.89□□□□□ -1.63
CHD9-219ENST00000569225 NOTCH2NLQ7Z3S9 236 aa4.89□□□□□ -1.63
CHD9-219ENST00000569225 KRTAP16-1A8MUX0 517 aa4.88□□□□□ -1.63
CHD9-219ENST00000569225 C8orf17Q9NRJ1 99 aa4.88□□□□□ -1.63
CHD9-219ENST00000569225 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
CHD9-219ENST00000569225 FAM236DA0A1B0GTK5 79 aa4.88□□□□□ -1.63
CHD9-219ENST00000569225 FAM236CP0DP71 79 aa4.88□□□□□ -1.63
CHD9-219ENST00000569225 K7EQZ3 153 aa4.87□□□□□ -1.63
CHD9-219ENST00000569225 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
CHD9-219ENST00000569225 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
CHD9-219ENST00000569225 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CHD9-219ENST00000569225 PMAIP1Q13794 54 aa4.86□□□□□ -1.63
CHD9-219ENST00000569225 A0A0U1RQV1 116 aa4.86□□□□□ -1.63
CHD9-219ENST00000569225 CXCL6P80162 114 aa4.86□□□□□ -1.63
CHD9-219ENST00000569225 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
CHD9-219ENST00000569225 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
CHD9-219ENST00000569225 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
CHD9-219ENST00000569225 TMEM254Q8TBM7 123 aa4.84□□□□□ -1.63
CHD9-219ENST00000569225 hDV103S1A0JD37 113 aa4.83□□□□□ -1.64
CHD9-219ENST00000569225 Q8N9L7 120 aa4.83□□□□□ -1.64
CHD9-219ENST00000569225 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
CHD9-219ENST00000569225 ATP5EP2Q5VTU8 51 aa4.83□□□□□ -1.64
CHD9-219ENST00000569225 Q8N9P0 234 aaPredicted RBP4.82□□□□□ -1.64
CHD9-219ENST00000569225 MRPL34Q9BQ48 92 aaKnown RBP4.82□□□□□ -1.64
CHD9-219ENST00000569225 MUC2Q02817 5179 aa4.82□□□□□ -1.64
CHD9-219ENST00000569225 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
CHD9-219ENST00000569225 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
CHD9-219ENST00000569225 HCG22E2RYF7 251 aa4.79□□□□□ -1.64
CHD9-219ENST00000569225 NDUFS5O43920 106 aa4.79□□□□□ -1.64
CHD9-219ENST00000569225 LINC00643Q86TS7 51 aa4.79□□□□□ -1.64
CHD9-219ENST00000569225 WFDC13Q8IUB5 93 aa4.79□□□□□ -1.64
CHD9-219ENST00000569225 ZCCHC13Q8WW36 166 aaKnown RBP4.79□□□□□ -1.64
CHD9-219ENST00000569225 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CHD9-219ENST00000569225 MT-ATP8P03928 68 aa4.75□□□□□ -1.65
CHD9-219ENST00000569225 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
CHD9-219ENST00000569225 FAM236AA0A1B0GUQ0 79 aa4.73□□□□□ -1.65
CHD9-219ENST00000569225 FAM236BA0A1B0GV22 79 aa4.73□□□□□ -1.65
CHD9-219ENST00000569225 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
CHD9-219ENST00000569225 TMEM258P61165 79 aa4.73□□□□□ -1.65
CHD9-219ENST00000569225 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
CHD9-219ENST00000569225 UQCRQO14949 82 aa4.71□□□□□ -1.66
CHD9-219ENST00000569225 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
CHD9-219ENST00000569225 TP53AIP1Q9HCN2 124 aa4.71□□□□□ -1.66
CHD9-219ENST00000569225 SPINK7P58062 85 aa4.71□□□□□ -1.66
CHD9-219ENST00000569225 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
CHD9-219ENST00000569225 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
CHD9-219ENST00000569225 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
CHD9-219ENST00000569225 Q5W150 140 aa4.67□□□□□ -1.66
CHD9-219ENST00000569225 A0A087WVE0 104 aa4.66□□□□□ -1.66
CHD9-219ENST00000569225 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
CHD9-219ENST00000569225 HRES1P13985 223 aa4.66□□□□□ -1.66
CHD9-219ENST00000569225 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
CHD9-219ENST00000569225 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.66
CHD9-219ENST00000569225 IGKV2-30P06310 120 aa4.65□□□□□ -1.66
CHD9-219ENST00000569225 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.66
CHD9-219ENST00000569225 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms