RNA–Protein interactions for RNA: ENST00000569223.1

EHD4-202, Transcript of EH domain containing 4, humanhuman

TSL 2

Gene EHD4, Length 2,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EHD4-202ENST00000569223 PKD1P98161 4303 aa13.61□□□□□ -0.23
EHD4-202ENST00000569223 A0A087X002 238 aa13.58□□□□□ -0.24
EHD4-202ENST00000569223 NOTCH2NLQ7Z3S9 236 aa13.58□□□□□ -0.24
EHD4-202ENST00000569223 FAT2Q9NYQ8 4349 aa13.57□□□□□ -0.24
EHD4-202ENST00000569223 SPINK6Q6UWN8 80 aa13.57□□□□□ -0.24
EHD4-202ENST00000569223 SPANXA2-OT1Q8N9U9 137 aa13.57□□□□□ -0.24
EHD4-202ENST00000569223 MRPL34Q9BQ48 92 aaKnown RBP13.57□□□□□ -0.24
EHD4-202ENST00000569223 HYDINQ4G0P3 5121 aa13.56□□□□□ -0.24
EHD4-202ENST00000569223 NDUFS5O43920 106 aa13.54□□□□□ -0.24
EHD4-202ENST00000569223 MPLKIPQ8TAP9 179 aa13.54□□□□□ -0.24
EHD4-202ENST00000569223 KRTAP13-2Q52LG2 175 aa13.51□□□□□ -0.25
EHD4-202ENST00000569223 LRP1BQ9NZR2 4599 aa13.47□□□□□ -0.25
EHD4-202ENST00000569223 KRTAP1-4P0C5Y4 121 aa13.42□□□□□ -0.26
EHD4-202ENST00000569223 PCOTHQ58A44 107 aa13.41□□□□□ -0.26
EHD4-202ENST00000569223 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
EHD4-202ENST00000569223 C8orf87E5RJ46 101 aa13.4□□□□□ -0.26
EHD4-202ENST00000569223 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
EHD4-202ENST00000569223 Q1T7F1 81 aa13.38□□□□□ -0.27
EHD4-202ENST00000569223 C1orf195Q5TG92 126 aa13.36□□□□□ -0.27
EHD4-202ENST00000569223 KRTAP13-3Q3SY46 172 aa13.32□□□□□ -0.28
EHD4-202ENST00000569223 Q5W150 140 aa13.32□□□□□ -0.28
EHD4-202ENST00000569223 VPS13BQ7Z7G8 4022 aa13.31□□□□□ -0.28
EHD4-202ENST00000569223 LINC00313P59037 77 aa13.3□□□□□ -0.28
EHD4-202ENST00000569223 LOC101927531A0A1B0GV80 90 aa13.28□□□□□ -0.28
EHD4-202ENST00000569223 LIMD2Q9BT23 127 aa13.27□□□□□ -0.29
EHD4-202ENST00000569223 PLA2G1BP04054 148 aaKnown RBP13.26□□□□□ -0.29
EHD4-202ENST00000569223 COA5Q86WW8 74 aa13.26□□□□□ -0.29
EHD4-202ENST00000569223 SACSQ9NZJ4 4579 aa13.23□□□□□ -0.29
EHD4-202ENST00000569223 Q8N9P0 234 aaPredicted RBP13.23□□□□□ -0.29
EHD4-202ENST00000569223 TYMSOSQ8TAI1 123 aa13.22□□□□□ -0.29
EHD4-202ENST00000569223 PRO0628Q9UI54 55 aa13.21□□□□□ -0.29
EHD4-202ENST00000569223 V9GYY9 64 aa13.2□□□□□ -0.3
EHD4-202ENST00000569223 C4orf48Q5BLP8 95 aa13.18□□□□□ -0.3
EHD4-202ENST00000569223 PSPHP1O15172 72 aa13.18□□□□□ -0.3
EHD4-202ENST00000569223 BRK1Q8WUW1 75 aa13.18□□□□□ -0.3
EHD4-202ENST00000569223 KRTAP16-1A8MUX0 517 aa13.17□□□□□ -0.3
EHD4-202ENST00000569223 PKHD1P08F94 4074 aa13.16□□□□□ -0.3
EHD4-202ENST00000569223 FAM229AH3BQW9 127 aa13.15□□□□□ -0.3
EHD4-202ENST00000569223 SPINK1P00995 79 aa13.13□□□□□ -0.31
EHD4-202ENST00000569223 A8MUN3 132 aa13.11□□□□□ -0.31
EHD4-202ENST00000569223 HRES1P13985 223 aa13.11□□□□□ -0.31
EHD4-202ENST00000569223 A0A1B0GVY2 172 aa13.1□□□□□ -0.31
EHD4-202ENST00000569223 RETNLBQ9BQ08 111 aa13.1□□□□□ -0.31
EHD4-202ENST00000569223 PRR26Q8N8Z3 221 aa13.08□□□□□ -0.31
EHD4-202ENST00000569223 SMR3BP02814 79 aaPredicted RBP13.08□□□□□ -0.32
EHD4-202ENST00000569223 DYNC1H1Q14204 4646 aaKnown RBP13.07□□□□□ -0.32
EHD4-202ENST00000569223 LINC00304Q8N9R0 145 aa13.05□□□□□ -0.32
EHD4-202ENST00000569223 Q5VV11 94 aa13.04□□□□□ -0.32
EHD4-202ENST00000569223 IGKV2-30P06310 120 aa13.03□□□□□ -0.32
EHD4-202ENST00000569223 RPS29P62273 56 aaKnown RBP13.01□□□□□ -0.33
EHD4-202ENST00000569223 PRR15LQ9BU68 103 aa13□□□□□ -0.33
EHD4-202ENST00000569223 SPAG11AQ6PDA7 123 aa12.98□□□□□ -0.33
EHD4-202ENST00000569223 KRTAP10-4P60372 401 aaPredicted RBP12.96□□□□□ -0.34
EHD4-202ENST00000569223 ACYP2P14621 99 aa12.93□□□□□ -0.34
EHD4-202ENST00000569223 DMAC1Q96GE9 116 aa12.93□□□□□ -0.34
EHD4-202ENST00000569223 APOBP04114 4563 aaKnown RBP12.92□□□□□ -0.34
EHD4-202ENST00000569223 LINC01558Q9Y6Z2 57 aa12.92□□□□□ -0.34
EHD4-202ENST00000569223 CHKB-CPT1BH3BT56 60 aa12.89□□□□□ -0.35
EHD4-202ENST00000569223 Q75L30 129 aa12.88□□□□□ -0.35
EHD4-202ENST00000569223 IGKV2D-30A0A075B6S6 120 aa12.86□□□□□ -0.35
EHD4-202ENST00000569223 RYR2Q92736 4967 aa12.86□□□□□ -0.35
EHD4-202ENST00000569223 PKHD1L1Q86WI1 4243 aa12.83□□□□□ -0.36
EHD4-202ENST00000569223 FAT1Q14517 4588 aa12.83□□□□□ -0.36
EHD4-202ENST00000569223 A8MU10 97 aa12.75□□□□□ -0.37
EHD4-202ENST00000569223 A6NED7 52 aa12.72□□□□□ -0.37
EHD4-202ENST00000569223 C9orf92A6NGG3 77 aa12.7□□□□□ -0.38
EHD4-202ENST00000569223 C7orf65Q6ZTY9 151 aa12.69□□□□□ -0.38
EHD4-202ENST00000569223 LCA10Q71F78 164 aa12.66□□□□□ -0.38
EHD4-202ENST00000569223 A8MUU9 505 aa12.66□□□□□ -0.38
EHD4-202ENST00000569223 C20orf166-AS1Q96NR2 134 aa12.66□□□□□ -0.38
EHD4-202ENST00000569223 KMT2CQ8NEZ4 4911 aaKnown RBP12.65□□□□□ -0.38
EHD4-202ENST00000569223 SPINK7P58062 85 aa12.61□□□□□ -0.39
EHD4-202ENST00000569223 CDC42SE1Q9NRR8 79 aa12.59□□□□□ -0.39
EHD4-202ENST00000569223 Q8N1X5 172 aa12.54□□□□□ -0.4
EHD4-202ENST00000569223 FLG2Q5D862 2391 aaPredicted RBP12.52□□□□□ -0.41
EHD4-202ENST00000569223 A0A1B0GU69 56 aa12.49□□□□□ -0.41
EHD4-202ENST00000569223 ATP11AUNQ6ZP68 121 aa12.49□□□□□ -0.41
EHD4-202ENST00000569223 Q5VSD8 79 aa12.47□□□□□ -0.41
EHD4-202ENST00000569223 SPTSSBQ8NFR3 76 aa12.47□□□□□ -0.41
EHD4-202ENST00000569223 KRTAP10-8P60410 259 aa12.45□□□□□ -0.42
EHD4-202ENST00000569223 PMAIP1Q13794 54 aa12.44□□□□□ -0.42
EHD4-202ENST00000569223 HSPG2P98160 4391 aa12.41□□□□□ -0.42
EHD4-202ENST00000569223 TNXBP22105 4242 aa12.41□□□□□ -0.42
EHD4-202ENST00000569223 FAT3Q8TDW7 4589 aa12.36□□□□□ -0.43
EHD4-202ENST00000569223 LRP1Q07954 4544 aaKnown RBP12.36□□□□□ -0.43
EHD4-202ENST00000569223 KRTAP3-1Q9BYR8 98 aa12.33□□□□□ -0.44
EHD4-202ENST00000569223 RYR3Q15413 4870 aa12.29□□□□□ -0.44
EHD4-202ENST00000569223 A6NN06 94 aa12.29□□□□□ -0.44
EHD4-202ENST00000569223 KRTAP17-1Q9BYP8 105 aa12.29□□□□□ -0.44
EHD4-202ENST00000569223 RYR1P21817 5038 aa12.27□□□□□ -0.44
EHD4-202ENST00000569223 SPATA8Q6RVD6 105 aa12.23□□□□□ -0.45
EHD4-202ENST00000569223 UQCR11O14957 56 aa12.22□□□□□ -0.45
EHD4-202ENST00000569223 MIR22HGQ0VDD5 57 aa12.18□□□□□ -0.46
EHD4-202ENST00000569223 COX6B2Q6YFQ2 88 aa12.17□□□□□ -0.46
EHD4-202ENST00000569223 SEC61GP60059 68 aa12.16□□□□□ -0.46
EHD4-202ENST00000569223 RPL37P61927 97 aaKnown RBP12.16□□□□□ -0.46
EHD4-202ENST00000569223 KTN1-AS1Q86SY8 53 aa12.13□□□□□ -0.47
EHD4-202ENST00000569223 XP32Q5T750 250 aa12.13□□□□□ -0.47
EHD4-202ENST00000569223 MT1HL1P0DM35 61 aa12.12□□□□□ -0.47
EHD4-202ENST00000569223 DMBT1Q9UGM3 2413 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms