RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 A0A1B0GVX0 72 aa9.07□□□□□ -0.96
COMMD4-224ENST00000568877 LINC00313P59037 77 aa9.07□□□□□ -0.96
COMMD4-224ENST00000568877 A8MWP4 228 aa9.06□□□□□ -0.96
COMMD4-224ENST00000568877 NDUFB1O75438 58 aa9.06□□□□□ -0.96
COMMD4-224ENST00000568877 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
COMMD4-224ENST00000568877 UBL5Q9BZL1 73 aa9.05□□□□□ -0.96
COMMD4-224ENST00000568877 BPY2O14599 106 aa9.04□□□□□ -0.96
COMMD4-224ENST00000568877 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
COMMD4-224ENST00000568877 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
COMMD4-224ENST00000568877 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
COMMD4-224ENST00000568877 IGKV3D-7A0A0C4DH55 119 aa9.02□□□□□ -0.97
COMMD4-224ENST00000568877 RPL37P61927 97 aaKnown RBP9.02□□□□□ -0.97
COMMD4-224ENST00000568877 Q75L30 129 aa9□□□□□ -0.97
COMMD4-224ENST00000568877 KRTAP16-1A8MUX0 517 aa8.99□□□□□ -0.97
COMMD4-224ENST00000568877 ACYP1P07311 99 aa8.99□□□□□ -0.97
COMMD4-224ENST00000568877 PRR15Q8IV56 129 aa8.99□□□□□ -0.97
COMMD4-224ENST00000568877 C20orf166-AS1Q96NR2 134 aa8.98□□□□□ -0.97
COMMD4-224ENST00000568877 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
COMMD4-224ENST00000568877 PCOTHQ58A44 107 aa8.97□□□□□ -0.97
COMMD4-224ENST00000568877 A8MUU9 505 aa8.96□□□□□ -0.98
COMMD4-224ENST00000568877 K7EQZ3 153 aa8.96□□□□□ -0.98
COMMD4-224ENST00000568877 C8orf17Q9NRJ1 99 aa8.96□□□□□ -0.98
COMMD4-224ENST00000568877 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
COMMD4-224ENST00000568877 MUC2Q02817 5179 aa8.92□□□□□ -0.98
COMMD4-224ENST00000568877 Q8N9L7 120 aa8.91□□□□□ -0.98
COMMD4-224ENST00000568877 MMP24-AS1A0A0U1RRL7 71 aa8.9□□□□□ -0.98
COMMD4-224ENST00000568877 CXCL6P80162 114 aa8.89□□□□□ -0.99
COMMD4-224ENST00000568877 KRTAP4-1Q9BYQ7 146 aa8.88□□□□□ -0.99
COMMD4-224ENST00000568877 J3QR89 54 aa8.87□□□□□ -0.99
COMMD4-224ENST00000568877 hDV103S1A0JD37 113 aa8.85□□□□□ -0.99
COMMD4-224ENST00000568877 Q8N9P0 234 aaPredicted RBP8.85□□□□□ -0.99
COMMD4-224ENST00000568877 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
COMMD4-224ENST00000568877 MRPL34Q9BQ48 92 aaKnown RBP8.84□□□□□ -0.99
COMMD4-224ENST00000568877 ATP5EP2Q5VTU8 51 aa8.81□□□□□ -1
COMMD4-224ENST00000568877 CASC2Q6XLA1 102 aa8.81□□□□□ -1
COMMD4-224ENST00000568877 WFDC13Q8IUB5 93 aa8.8□□□□□ -1
COMMD4-224ENST00000568877 LINC00643Q86TS7 51 aa8.79□□□□□ -1
COMMD4-224ENST00000568877 HCG22E2RYF7 251 aa8.78□□□□□ -1
COMMD4-224ENST00000568877 ZCCHC13Q8WW36 166 aaKnown RBP8.76□□□□□ -1.01
COMMD4-224ENST00000568877 NDUFS5O43920 106 aa8.75□□□□□ -1.01
COMMD4-224ENST00000568877 K7ERU9 68 aa8.73□□□□□ -1.01
COMMD4-224ENST00000568877 A0A0U1RQV1 116 aa8.72□□□□□ -1.01
COMMD4-224ENST00000568877 HIST1H4AP62805 103 aaKnown RBP8.71□□□□□ -1.02
COMMD4-224ENST00000568877 FAT4Q6V0I7 4981 aa8.65□□□□□ -1.02
COMMD4-224ENST00000568877 Q5W150 140 aa8.63□□□□□ -1.03
COMMD4-224ENST00000568877 A0A087WVE0 104 aa8.62□□□□□ -1.03
COMMD4-224ENST00000568877 SPINK7P58062 85 aa8.61□□□□□ -1.03
COMMD4-224ENST00000568877 KRTAP19-2Q3LHN2 52 aa8.61□□□□□ -1.03
COMMD4-224ENST00000568877 TP53AIP1Q9HCN2 124 aa8.6□□□□□ -1.03
COMMD4-224ENST00000568877 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
COMMD4-224ENST00000568877 HRES1P13985 223 aa8.56□□□□□ -1.04
COMMD4-224ENST00000568877 COX6B2Q6YFQ2 88 aa8.54□□□□□ -1.04
COMMD4-224ENST00000568877 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
COMMD4-224ENST00000568877 MPLKIPQ8TAP9 179 aa8.52□□□□□ -1.05
COMMD4-224ENST00000568877 IGKV2D-30A0A075B6S6 120 aa8.51□□□□□ -1.05
COMMD4-224ENST00000568877 IGKV2-30P06310 120 aa8.51□□□□□ -1.05
COMMD4-224ENST00000568877 IMUPQ9GZP8 106 aa8.51□□□□□ -1.05
COMMD4-224ENST00000568877 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
COMMD4-224ENST00000568877 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
COMMD4-224ENST00000568877 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
COMMD4-224ENST00000568877 UQCRQO14949 82 aa8.47□□□□□ -1.05
COMMD4-224ENST00000568877 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
COMMD4-224ENST00000568877 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
COMMD4-224ENST00000568877 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
COMMD4-224ENST00000568877 MT1HP80294 61 aa8.43□□□□□ -1.06
COMMD4-224ENST00000568877 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
COMMD4-224ENST00000568877 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
COMMD4-224ENST00000568877 H0Y9P7 68 aa8.39□□□□□ -1.07
COMMD4-224ENST00000568877 ATOX1O00244 68 aa8.38□□□□□ -1.07
COMMD4-224ENST00000568877 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
COMMD4-224ENST00000568877 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
COMMD4-224ENST00000568877 FAM236AA0A1B0GUQ0 79 aa8.35□□□□□ -1.07
COMMD4-224ENST00000568877 FAM236BA0A1B0GV22 79 aa8.35□□□□□ -1.07
COMMD4-224ENST00000568877 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
COMMD4-224ENST00000568877 M0R2T5 61 aa8.32□□□□□ -1.08
COMMD4-224ENST00000568877 MP68P56378 58 aa8.32□□□□□ -1.08
COMMD4-224ENST00000568877 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
COMMD4-224ENST00000568877 C5orf47Q569G3 176 aa8.32□□□□□ -1.08
COMMD4-224ENST00000568877 C1orf64Q8NEQ6 169 aa8.31□□□□□ -1.08
COMMD4-224ENST00000568877 LINC00208Q96KT6 92 aa8.3□□□□□ -1.08
COMMD4-224ENST00000568877 SMIM20Q8N5G0 67 aa8.28□□□□□ -1.08
COMMD4-224ENST00000568877 H1FX-AS1Q4G0G2 97 aa8.26□□□□□ -1.09
COMMD4-224ENST00000568877 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
COMMD4-224ENST00000568877 H3BPC8 53 aa8.25□□□□□ -1.09
COMMD4-224ENST00000568877 KRTAP3-1Q9BYR8 98 aa8.21□□□□□ -1.1
COMMD4-224ENST00000568877 KRTAP10-6P60371 365 aaPredicted RBP8.2□□□□□ -1.1
COMMD4-224ENST00000568877 KLKP1Q107X0 134 aa8.19□□□□□ -1.1
COMMD4-224ENST00000568877 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
COMMD4-224ENST00000568877 SERP2Q8N6R1 65 aa8.13□□□□□ -1.11
COMMD4-224ENST00000568877 S4R3F8 94 aa8.07□□□□□ -1.12
COMMD4-224ENST00000568877 A8MUN3 132 aa8.05□□□□□ -1.12
COMMD4-224ENST00000568877 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
COMMD4-224ENST00000568877 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
COMMD4-224ENST00000568877 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
COMMD4-224ENST00000568877 LCA10Q71F78 164 aa8.02□□□□□ -1.13
COMMD4-224ENST00000568877 COX7CP15954 63 aa7.99□□□□□ -1.13
COMMD4-224ENST00000568877 MT2AP02795 61 aa7.97□□□□□ -1.13
COMMD4-224ENST00000568877 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
COMMD4-224ENST00000568877 DMAC1Q96GE9 116 aa7.96□□□□□ -1.14
COMMD4-224ENST00000568877 KRTAP3-3Q9BYR6 98 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms