RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 SIGMAR1Q99720 223 aa5.55□□□□□ -1.52
PKM-221ENST00000568743 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
PKM-221ENST00000568743 XP32Q5T750 250 aa5.54□□□□□ -1.52
PKM-221ENST00000568743 LINC00472Q9H8W2 130 aa5.54□□□□□ -1.52
PKM-221ENST00000568743 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
PKM-221ENST00000568743 A0A1B0GW54 56 aa5.51□□□□□ -1.53
PKM-221ENST00000568743 DSCR10P59022 87 aa5.49□□□□□ -1.53
PKM-221ENST00000568743 NREPQ16612 68 aa5.49□□□□□ -1.53
PKM-221ENST00000568743 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
PKM-221ENST00000568743 NOTCH2NLQ7Z3S9 236 aa5.47□□□□□ -1.53
PKM-221ENST00000568743 J3KT08 172 aa5.46□□□□□ -1.54
PKM-221ENST00000568743 A0A1B0GVX0 72 aa5.45□□□□□ -1.54
PKM-221ENST00000568743 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
PKM-221ENST00000568743 LINC00313P59037 77 aa5.44□□□□□ -1.54
PKM-221ENST00000568743 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
PKM-221ENST00000568743 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
PKM-221ENST00000568743 Q6ZVQ6 151 aa5.44□□□□□ -1.54
PKM-221ENST00000568743 LINC00846Q9NV44 126 aa5.44□□□□□ -1.54
PKM-221ENST00000568743 MT-ATP8P03928 68 aa5.43□□□□□ -1.54
PKM-221ENST00000568743 IGKV3D-7A0A0C4DH55 119 aa5.42□□□□□ -1.54
PKM-221ENST00000568743 A8MWP4 228 aa5.42□□□□□ -1.54
PKM-221ENST00000568743 NDUFB1O75438 58 aa5.42□□□□□ -1.54
PKM-221ENST00000568743 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
PKM-221ENST00000568743 BPY2O14599 106 aa5.41□□□□□ -1.54
PKM-221ENST00000568743 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
PKM-221ENST00000568743 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
PKM-221ENST00000568743 C8orf87E5RJ46 101 aa5.4□□□□□ -1.54
PKM-221ENST00000568743 Q75L30 129 aa5.4□□□□□ -1.54
PKM-221ENST00000568743 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.54
PKM-221ENST00000568743 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
PKM-221ENST00000568743 FAM240AA0A1B0GVK7 77 aa5.39□□□□□ -1.55
PKM-221ENST00000568743 A8MUU9 505 aa5.39□□□□□ -1.55
PKM-221ENST00000568743 K7EQZ3 153 aa5.39□□□□□ -1.55
PKM-221ENST00000568743 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
PKM-221ENST00000568743 C8orf17Q9NRJ1 99 aa5.39□□□□□ -1.55
PKM-221ENST00000568743 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
PKM-221ENST00000568743 Q8N9L7 120 aa5.38□□□□□ -1.55
PKM-221ENST00000568743 ATP11AUNQ6ZP68 121 aa5.36□□□□□ -1.55
PKM-221ENST00000568743 MMP24-AS1A0A0U1RRL7 71 aa5.35□□□□□ -1.55
PKM-221ENST00000568743 MUC2Q02817 5179 aa5.34□□□□□ -1.55
PKM-221ENST00000568743 ACYP1P07311 99 aa5.33□□□□□ -1.56
PKM-221ENST00000568743 hDV103S1A0JD37 113 aa5.31□□□□□ -1.56
PKM-221ENST00000568743 WFDC13Q8IUB5 93 aa5.31□□□□□ -1.56
PKM-221ENST00000568743 Q8N9P0 234 aaPredicted RBP5.3□□□□□ -1.56
PKM-221ENST00000568743 TMEM254Q8TBM7 123 aa5.3□□□□□ -1.56
PKM-221ENST00000568743 ANAPC13Q9BS18 74 aa5.3□□□□□ -1.56
PKM-221ENST00000568743 A0A0U1RQV1 116 aa5.29□□□□□ -1.56
PKM-221ENST00000568743 CXCL6P80162 114 aa5.29□□□□□ -1.56
PKM-221ENST00000568743 MRPL34Q9BQ48 92 aaKnown RBP5.29□□□□□ -1.56
PKM-221ENST00000568743 CASC2Q6XLA1 102 aa5.28□□□□□ -1.56
PKM-221ENST00000568743 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
PKM-221ENST00000568743 NDUFS5O43920 106 aa5.27□□□□□ -1.57
PKM-221ENST00000568743 LINC00643Q86TS7 51 aa5.27□□□□□ -1.57
PKM-221ENST00000568743 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
PKM-221ENST00000568743 HCG22E2RYF7 251 aa5.26□□□□□ -1.57
PKM-221ENST00000568743 ATP5EP2Q5VTU8 51 aa5.24□□□□□ -1.57
PKM-221ENST00000568743 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
PKM-221ENST00000568743 HIST1H4AP62805 103 aaKnown RBP5.22□□□□□ -1.57
PKM-221ENST00000568743 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
PKM-221ENST00000568743 Q5W150 140 aa5.2□□□□□ -1.58
PKM-221ENST00000568743 A0A087WVE0 104 aa5.19□□□□□ -1.58
PKM-221ENST00000568743 FAM236AA0A1B0GUQ0 79 aa5.18□□□□□ -1.58
PKM-221ENST00000568743 FAM236BA0A1B0GV22 79 aa5.18□□□□□ -1.58
PKM-221ENST00000568743 SPINK7P58062 85 aa5.18□□□□□ -1.58
PKM-221ENST00000568743 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
PKM-221ENST00000568743 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
PKM-221ENST00000568743 HRES1P13985 223 aa5.17□□□□□ -1.58
PKM-221ENST00000568743 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
PKM-221ENST00000568743 UQCRQO14949 82 aa5.14□□□□□ -1.59
PKM-221ENST00000568743 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
PKM-221ENST00000568743 H3BS24 57 aa5.13□□□□□ -1.59
PKM-221ENST00000568743 ATOX1O00244 68 aa5.12□□□□□ -1.59
PKM-221ENST00000568743 COX7CP15954 63 aa5.12□□□□□ -1.59
PKM-221ENST00000568743 MT1HP80294 61 aa5.12□□□□□ -1.59
PKM-221ENST00000568743 MPLKIPQ8TAP9 179 aa5.12□□□□□ -1.59
PKM-221ENST00000568743 TP53AIP1Q9HCN2 124 aa5.12□□□□□ -1.59
PKM-221ENST00000568743 FAM236DA0A1B0GTK5 79 aa5.11□□□□□ -1.59
PKM-221ENST00000568743 FAM236CP0DP71 79 aa5.11□□□□□ -1.59
PKM-221ENST00000568743 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
PKM-221ENST00000568743 C7orf65Q6ZTY9 151 aa5.1□□□□□ -1.59
PKM-221ENST00000568743 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
PKM-221ENST00000568743 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
PKM-221ENST00000568743 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
PKM-221ENST00000568743 TRAV22A0A0B4J277 110 aa5.06□□□□□ -1.6
PKM-221ENST00000568743 M0R2T5 61 aa5.05□□□□□ -1.6
PKM-221ENST00000568743 SMIM20Q8N5G0 67 aa5.04□□□□□ -1.6
PKM-221ENST00000568743 H0Y9P7 68 aa5.03□□□□□ -1.6
PKM-221ENST00000568743 OCR1Q9BZK8 76 aa5.03□□□□□ -1.6
PKM-221ENST00000568743 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
PKM-221ENST00000568743 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
PKM-221ENST00000568743 C4orf26Q17RF5 130 aa5.02□□□□□ -1.61
PKM-221ENST00000568743 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
PKM-221ENST00000568743 FLGP20930 4061 aaPredicted RBP5.01□□□□□ -1.61
PKM-221ENST00000568743 TMEM258P61165 79 aa5□□□□□ -1.61
PKM-221ENST00000568743 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
PKM-221ENST00000568743 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
PKM-221ENST00000568743 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
PKM-221ENST00000568743 TRAV7A0A075B6U4 112 aa4.98□□□□□ -1.61
PKM-221ENST00000568743 C1orf64Q8NEQ6 169 aa4.98□□□□□ -1.61
PKM-221ENST00000568743 H1FX-AS1Q4G0G2 97 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms