RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
HERPUD1-215ENST00000568676 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-215ENST00000568676 H3BMG7 143 aa7.77□□□□□ -1.17
HERPUD1-215ENST00000568676 TMEM256-PLSCR3K7ERE1 68 aa7.77□□□□□ -1.17
HERPUD1-215ENST00000568676 TRACP01848 142 aa7.77□□□□□ -1.17
HERPUD1-215ENST00000568676 BATFQ16520 125 aa7.74□□□□□ -1.17
HERPUD1-215ENST00000568676 KRTAP19-6Q3LI70 58 aa7.74□□□□□ -1.17
HERPUD1-215ENST00000568676 NOTCH2NLQ7Z3S9 236 aa7.74□□□□□ -1.17
HERPUD1-215ENST00000568676 IGKV4-1P06312 121 aa7.73□□□□□ -1.17
HERPUD1-215ENST00000568676 LYRM7Q5U5X0 104 aa7.73□□□□□ -1.17
HERPUD1-215ENST00000568676 SYNE2Q8WXH0 6885 aaKnown RBP7.71□□□□□ -1.17
HERPUD1-215ENST00000568676 UBE2V1Q13404 147 aa7.71□□□□□ -1.18
HERPUD1-215ENST00000568676 TRBV7-4A0A0J9YYF1 115 aa7.7□□□□□ -1.18
HERPUD1-215ENST00000568676 A0A1W2PNM2 257 aa7.7□□□□□ -1.18
HERPUD1-215ENST00000568676 ATXN8Q156A1 80 aa7.7□□□□□ -1.18
HERPUD1-215ENST00000568676 ANKRD29Q8N6D5 301 aa7.69□□□□□ -1.18
HERPUD1-215ENST00000568676 NAA38Q9BRA0 125 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-215ENST00000568676 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-215ENST00000568676 BAALC-AS2P0C853 105 aa7.66□□□□□ -1.18
HERPUD1-215ENST00000568676 A8MWP4 228 aa7.65□□□□□ -1.18
HERPUD1-215ENST00000568676 A0A1B0GV72 72 aa7.64□□□□□ -1.19
HERPUD1-215ENST00000568676 RBM3P98179 157 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-215ENST00000568676 LINC00472Q9H8W2 130 aa7.64□□□□□ -1.19
HERPUD1-215ENST00000568676 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
HERPUD1-215ENST00000568676 C9orf118A6NHY6 69 aa7.63□□□□□ -1.19
HERPUD1-215ENST00000568676 C8orf87E5RJ46 101 aa7.63□□□□□ -1.19
HERPUD1-215ENST00000568676 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
HERPUD1-215ENST00000568676 KRTAP6-3Q3LI67 103 aa7.62□□□□□ -1.19
HERPUD1-215ENST00000568676 CCKP06307 115 aa7.61□□□□□ -1.19
HERPUD1-215ENST00000568676 TAX1BP3O14907 124 aa7.6□□□□□ -1.19
HERPUD1-215ENST00000568676 JMJD7-PLA2G4BH0Y9G9 81 aa7.59□□□□□ -1.19
HERPUD1-215ENST00000568676 DEFB116Q30KQ4 102 aa7.59□□□□□ -1.19
HERPUD1-215ENST00000568676 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-215ENST00000568676 A0A1W2PPM0 123 aa7.58□□□□□ -1.2
HERPUD1-215ENST00000568676 C9JAW5 83 aa7.58□□□□□ -1.2
HERPUD1-215ENST00000568676 SPINK7P58062 85 aa7.58□□□□□ -1.2
HERPUD1-215ENST00000568676 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
HERPUD1-215ENST00000568676 A0A1B0GVX0 72 aa7.57□□□□□ -1.2
HERPUD1-215ENST00000568676 VPS25Q9BRG1 176 aa7.57□□□□□ -1.2
HERPUD1-215ENST00000568676 COL5A1-AS1Q5SY13 56 aa7.56□□□□□ -1.2
HERPUD1-215ENST00000568676 PDE6GP18545 87 aa7.55□□□□□ -1.2
HERPUD1-215ENST00000568676 H3BT86 120 aa7.52□□□□□ -1.21
HERPUD1-215ENST00000568676 LOC110117498A0A087WWA1 95 aa7.51□□□□□ -1.21
HERPUD1-215ENST00000568676 A0A1B0GW54 56 aa7.51□□□□□ -1.21
HERPUD1-215ENST00000568676 J3KT08 172 aa7.51□□□□□ -1.21
HERPUD1-215ENST00000568676 SPCS1Q9Y6A9 102 aa7.51□□□□□ -1.21
HERPUD1-215ENST00000568676 Q8N9P0 234 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-215ENST00000568676 PCP4L1A6NKN8 68 aa7.49□□□□□ -1.21
HERPUD1-215ENST00000568676 Q6ZQT0 140 aa7.49□□□□□ -1.21
HERPUD1-215ENST00000568676 WFDC13Q8IUB5 93 aa7.49□□□□□ -1.21
HERPUD1-215ENST00000568676 C14orf132Q9NPU4 83 aa7.48□□□□□ -1.21
HERPUD1-215ENST00000568676 NDUFB1O75438 58 aa7.45□□□□□ -1.22
HERPUD1-215ENST00000568676 K7EP34 96 aa7.41□□□□□ -1.22
HERPUD1-215ENST00000568676 GTF2H5Q6ZYL4 71 aa7.4□□□□□ -1.22
HERPUD1-215ENST00000568676 NREPQ16612 68 aa7.38□□□□□ -1.23
HERPUD1-215ENST00000568676 H1FX-AS1Q4G0G2 97 aa7.38□□□□□ -1.23
HERPUD1-215ENST00000568676 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
HERPUD1-215ENST00000568676 IGKV3D-7A0A0C4DH55 119 aa7.35□□□□□ -1.23
HERPUD1-215ENST00000568676 PRO0461Q9UI25 63 aa7.33□□□□□ -1.24
HERPUD1-215ENST00000568676 Q6ZVQ6 151 aa7.32□□□□□ -1.24
HERPUD1-215ENST00000568676 F8W1H4 67 aa7.31□□□□□ -1.24
HERPUD1-215ENST00000568676 NEBP20929 6669 aa7.29□□□□□ -1.24
HERPUD1-215ENST00000568676 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
HERPUD1-215ENST00000568676 A6NN06 94 aa7.25□□□□□ -1.25
HERPUD1-215ENST00000568676 BPY2O14599 106 aa7.25□□□□□ -1.25
HERPUD1-215ENST00000568676 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
HERPUD1-215ENST00000568676 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-215ENST00000568676 UBL5Q9BZL1 73 aa7.23□□□□□ -1.25
HERPUD1-215ENST00000568676 ETDBQ3ZM63 59 aa7.22□□□□□ -1.25
HERPUD1-215ENST00000568676 KRTAP20-1Q3LI63 56 aa7.21□□□□□ -1.26
HERPUD1-215ENST00000568676 MUC12Q9UKN1 5478 aa7.21□□□□□ -1.26
HERPUD1-215ENST00000568676 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
HERPUD1-215ENST00000568676 K7EQZ3 153 aa7.19□□□□□ -1.26
HERPUD1-215ENST00000568676 C7orf65Q6ZTY9 151 aa7.19□□□□□ -1.26
HERPUD1-215ENST00000568676 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
HERPUD1-215ENST00000568676 Q5VV11 94 aa7.17□□□□□ -1.26
HERPUD1-215ENST00000568676 NDUFS5O43920 106 aa7.16□□□□□ -1.26
HERPUD1-215ENST00000568676 IGKV2D-30A0A075B6S6 120 aa7.15□□□□□ -1.26
HERPUD1-215ENST00000568676 IGKV2-30P06310 120 aa7.15□□□□□ -1.26
HERPUD1-215ENST00000568676 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
HERPUD1-215ENST00000568676 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
HERPUD1-215ENST00000568676 MT1BP07438 61 aa7.13□□□□□ -1.27
HERPUD1-215ENST00000568676 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
HERPUD1-215ENST00000568676 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
HERPUD1-215ENST00000568676 Q8N9L7 120 aa7.11□□□□□ -1.27
HERPUD1-215ENST00000568676 ACYP1P07311 99 aa7.1□□□□□ -1.27
HERPUD1-215ENST00000568676 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
HERPUD1-215ENST00000568676 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
HERPUD1-215ENST00000568676 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
HERPUD1-215ENST00000568676 CXCL6P80162 114 aa7.08□□□□□ -1.28
HERPUD1-215ENST00000568676 A0A1B0GV90 55 aa7.07□□□□□ -1.28
HERPUD1-215ENST00000568676 C4orf26Q17RF5 130 aa7.07□□□□□ -1.28
HERPUD1-215ENST00000568676 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
HERPUD1-215ENST00000568676 FAM240AA0A1B0GVK7 77 aa7.06□□□□□ -1.28
HERPUD1-215ENST00000568676 Q5W150 140 aa7.06□□□□□ -1.28
HERPUD1-215ENST00000568676 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
HERPUD1-215ENST00000568676 CSAG1Q6PB30 78 aa7.04□□□□□ -1.28
HERPUD1-215ENST00000568676 S4R3F8 94 aa7.01□□□□□ -1.29
HERPUD1-215ENST00000568676 ATP5EP2Q5VTU8 51 aa6.99□□□□□ -1.29
HERPUD1-215ENST00000568676 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms