RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 Q6ZVQ6 151 aa8.16□□□□□ -1.1
KLHDC4-223ENST00000568499 LINC00846Q9NV44 126 aa8.16□□□□□ -1.1
KLHDC4-223ENST00000568499 A0A1B0GVX0 72 aa8.15□□□□□ -1.1
KLHDC4-223ENST00000568499 A8MWP4 228 aa8.15□□□□□ -1.1
KLHDC4-223ENST00000568499 C8orf87E5RJ46 101 aa8.15□□□□□ -1.1
KLHDC4-223ENST00000568499 SEC61BP60468 96 aaKnown RBP8.13□□□□□ -1.11
KLHDC4-223ENST00000568499 DSCR10P59022 87 aa8.12□□□□□ -1.11
KLHDC4-223ENST00000568499 FAM240AA0A1B0GVK7 77 aa8.11□□□□□ -1.11
KLHDC4-223ENST00000568499 J3QR89 54 aa8.11□□□□□ -1.11
KLHDC4-223ENST00000568499 PRR15Q8IV56 129 aa8.09□□□□□ -1.11
KLHDC4-223ENST00000568499 IGKV3D-7A0A0C4DH55 119 aa8.08□□□□□ -1.12
KLHDC4-223ENST00000568499 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
KLHDC4-223ENST00000568499 Q75L30 129 aa8.06□□□□□ -1.12
KLHDC4-223ENST00000568499 C8orf17Q9NRJ1 99 aa8.05□□□□□ -1.12
KLHDC4-223ENST00000568499 CXCL6P80162 114 aa8.04□□□□□ -1.12
KLHDC4-223ENST00000568499 ATP11AUNQ6ZP68 121 aa8.04□□□□□ -1.12
KLHDC4-223ENST00000568499 K7EQZ3 153 aa8.03□□□□□ -1.12
KLHDC4-223ENST00000568499 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
KLHDC4-223ENST00000568499 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
KLHDC4-223ENST00000568499 A8MUU9 505 aa8.01□□□□□ -1.13
KLHDC4-223ENST00000568499 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
KLHDC4-223ENST00000568499 PCOTHQ58A44 107 aa8□□□□□ -1.13
KLHDC4-223ENST00000568499 ATP5EP2Q5VTU8 51 aa8□□□□□ -1.13
KLHDC4-223ENST00000568499 hDV103S1A0JD37 113 aa7.98□□□□□ -1.13
KLHDC4-223ENST00000568499 Q8N9L7 120 aa7.98□□□□□ -1.13
KLHDC4-223ENST00000568499 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
KLHDC4-223ENST00000568499 LINC00643Q86TS7 51 aa7.97□□□□□ -1.13
KLHDC4-223ENST00000568499 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
KLHDC4-223ENST00000568499 MMP24-AS1A0A0U1RRL7 71 aa7.96□□□□□ -1.14
KLHDC4-223ENST00000568499 K7ERU9 68 aa7.95□□□□□ -1.14
KLHDC4-223ENST00000568499 MRPL34Q9BQ48 92 aaKnown RBP7.95□□□□□ -1.14
KLHDC4-223ENST00000568499 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
KLHDC4-223ENST00000568499 Q8N9P0 234 aaPredicted RBP7.94□□□□□ -1.14
KLHDC4-223ENST00000568499 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
KLHDC4-223ENST00000568499 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
KLHDC4-223ENST00000568499 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
KLHDC4-223ENST00000568499 NDUFS5O43920 106 aa7.91□□□□□ -1.14
KLHDC4-223ENST00000568499 HIST1H4AP62805 103 aaKnown RBP7.89□□□□□ -1.15
KLHDC4-223ENST00000568499 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
KLHDC4-223ENST00000568499 ZCCHC13Q8WW36 166 aaKnown RBP7.87□□□□□ -1.15
KLHDC4-223ENST00000568499 KRTAP4-1Q9BYQ7 146 aa7.81□□□□□ -1.16
KLHDC4-223ENST00000568499 TP53AIP1Q9HCN2 124 aa7.8□□□□□ -1.16
KLHDC4-223ENST00000568499 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
KLHDC4-223ENST00000568499 MUC2Q02817 5179 aa7.76□□□□□ -1.17
KLHDC4-223ENST00000568499 A0A087WVE0 104 aa7.74□□□□□ -1.17
KLHDC4-223ENST00000568499 PCP4P48539 62 aa7.73□□□□□ -1.17
KLHDC4-223ENST00000568499 IMUPQ9GZP8 106 aa7.73□□□□□ -1.17
KLHDC4-223ENST00000568499 SPINK7P58062 85 aa7.72□□□□□ -1.17
KLHDC4-223ENST00000568499 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
KLHDC4-223ENST00000568499 Q5W150 140 aa7.69□□□□□ -1.18
KLHDC4-223ENST00000568499 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
KLHDC4-223ENST00000568499 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
KLHDC4-223ENST00000568499 RBM12B-AS1Q9P1G2 102 aa7.68□□□□□ -1.18
KLHDC4-223ENST00000568499 UQCRQO14949 82 aa7.67□□□□□ -1.18
KLHDC4-223ENST00000568499 IGKV2D-30A0A075B6S6 120 aa7.66□□□□□ -1.18
KLHDC4-223ENST00000568499 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
KLHDC4-223ENST00000568499 C7orf65Q6ZTY9 151 aa7.66□□□□□ -1.18
KLHDC4-223ENST00000568499 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
KLHDC4-223ENST00000568499 FAM236DA0A1B0GTK5 79 aa7.62□□□□□ -1.19
KLHDC4-223ENST00000568499 FAM236CP0DP71 79 aa7.62□□□□□ -1.19
KLHDC4-223ENST00000568499 ATOX1O00244 68 aa7.61□□□□□ -1.19
KLHDC4-223ENST00000568499 HRES1P13985 223 aa7.61□□□□□ -1.19
KLHDC4-223ENST00000568499 H0Y9P7 68 aa7.57□□□□□ -1.2
KLHDC4-223ENST00000568499 OCR1Q9BZK8 76 aa7.57□□□□□ -1.2
KLHDC4-223ENST00000568499 LOC101927531A0A1B0GV80 90 aa7.56□□□□□ -1.2
KLHDC4-223ENST00000568499 MP68P56378 58 aa7.56□□□□□ -1.2
KLHDC4-223ENST00000568499 KRTAP19-2Q3LHN2 52 aa7.56□□□□□ -1.2
KLHDC4-223ENST00000568499 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
KLHDC4-223ENST00000568499 MPLKIPQ8TAP9 179 aa7.56□□□□□ -1.2
KLHDC4-223ENST00000568499 FAM236AA0A1B0GUQ0 79 aa7.55□□□□□ -1.2
KLHDC4-223ENST00000568499 FAM236BA0A1B0GV22 79 aa7.55□□□□□ -1.2
KLHDC4-223ENST00000568499 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
KLHDC4-223ENST00000568499 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
KLHDC4-223ENST00000568499 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
KLHDC4-223ENST00000568499 CYP4F30PQ9H0H9 118 aa7.51□□□□□ -1.21
KLHDC4-223ENST00000568499 C1orf64Q8NEQ6 169 aa7.5□□□□□ -1.21
KLHDC4-223ENST00000568499 H3BPC8 53 aa7.49□□□□□ -1.21
KLHDC4-223ENST00000568499 LINC00208Q96KT6 92 aa7.49□□□□□ -1.21
KLHDC4-223ENST00000568499 TRAV7A0A075B6U4 112 aa7.47□□□□□ -1.21
KLHDC4-223ENST00000568499 M0R2T5 61 aa7.47□□□□□ -1.21
KLHDC4-223ENST00000568499 MT1HP80294 61 aa7.46□□□□□ -1.22
KLHDC4-223ENST00000568499 C4orf26Q17RF5 130 aa7.46□□□□□ -1.22
KLHDC4-223ENST00000568499 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
KLHDC4-223ENST00000568499 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
KLHDC4-223ENST00000568499 SERP2Q8N6R1 65 aa7.37□□□□□ -1.23
KLHDC4-223ENST00000568499 FLGP20930 4061 aaPredicted RBP7.36□□□□□ -1.23
KLHDC4-223ENST00000568499 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
KLHDC4-223ENST00000568499 A8MUN3 132 aa7.3□□□□□ -1.24
KLHDC4-223ENST00000568499 ANAPC13Q9BS18 74 aa7.3□□□□□ -1.24
KLHDC4-223ENST00000568499 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
KLHDC4-223ENST00000568499 S4R3F8 94 aa7.27□□□□□ -1.25
KLHDC4-223ENST00000568499 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
KLHDC4-223ENST00000568499 C20orf197Q8N268 126 aa7.26□□□□□ -1.25
KLHDC4-223ENST00000568499 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
KLHDC4-223ENST00000568499 COX7CP15954 63 aa7.24□□□□□ -1.25
KLHDC4-223ENST00000568499 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
KLHDC4-223ENST00000568499 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
KLHDC4-223ENST00000568499 LCA10Q71F78 164 aa7.17□□□□□ -1.26
KLHDC4-223ENST00000568499 DMAC1Q96GE9 116 aa7.17□□□□□ -1.26
KLHDC4-223ENST00000568499 NDUFC1O43677 76 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms