RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 CD164Q04900 197 aa5.96□□□□□ -1.46
CDH3-207ENST00000568292 Q6ZRX8 168 aa5.96□□□□□ -1.46
CDH3-207ENST00000568292 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
CDH3-207ENST00000568292 LINC00483Q53H64 154 aa5.95□□□□□ -1.46
CDH3-207ENST00000568292 SMIM11BQ8TCY0 68 aa5.95□□□□□ -1.46
CDH3-207ENST00000568292 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
CDH3-207ENST00000568292 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
CDH3-207ENST00000568292 Q9BRP9 147 aa5.94□□□□□ -1.46
CDH3-207ENST00000568292 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
CDH3-207ENST00000568292 Q8NBF4 154 aa5.92□□□□□ -1.46
CDH3-207ENST00000568292 RETNLBQ9BQ08 111 aa5.92□□□□□ -1.46
CDH3-207ENST00000568292 SPINK1P00995 79 aa5.91□□□□□ -1.46
CDH3-207ENST00000568292 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.46
CDH3-207ENST00000568292 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.46
CDH3-207ENST00000568292 TRBV7-4A0A0J9YYF1 115 aa5.9□□□□□ -1.46
CDH3-207ENST00000568292 DHRS4-AS1Q9P1J3 65 aa5.9□□□□□ -1.46
CDH3-207ENST00000568292 COX7BP24311 80 aa5.89□□□□□ -1.47
CDH3-207ENST00000568292 MOBPQ13875 183 aa5.89□□□□□ -1.47
CDH3-207ENST00000568292 Q1T7F1 81 aa5.89□□□□□ -1.47
CDH3-207ENST00000568292 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
CDH3-207ENST00000568292 ST20-AS1Q8NBB2 130 aa5.88□□□□□ -1.47
CDH3-207ENST00000568292 ELOF1P60002 83 aaKnown RBP5.87□□□□□ -1.47
CDH3-207ENST00000568292 C6orf99Q4VX62 202 aa5.87□□□□□ -1.47
CDH3-207ENST00000568292 Q6ZQT0 140 aa5.87□□□□□ -1.47
CDH3-207ENST00000568292 TMEM254Q8TBM7 123 aa5.87□□□□□ -1.47
CDH3-207ENST00000568292 NREPQ16612 68 aa5.86□□□□□ -1.47
CDH3-207ENST00000568292 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
CDH3-207ENST00000568292 SNURFQ9Y675 71 aa5.86□□□□□ -1.47
CDH3-207ENST00000568292 SPRR1BP22528 89 aa5.85□□□□□ -1.47
CDH3-207ENST00000568292 RPS29P62273 56 aaKnown RBP5.85□□□□□ -1.47
CDH3-207ENST00000568292 Q6ZVQ6 151 aa5.85□□□□□ -1.47
CDH3-207ENST00000568292 UBR4Q5T4S7 5183 aa5.84□□□□□ -1.47
CDH3-207ENST00000568292 DEFB105AQ8NG35 78 aa5.83□□□□□ -1.48
CDH3-207ENST00000568292 LRP2P98164 4655 aa5.82□□□□□ -1.48
CDH3-207ENST00000568292 Q8N377 158 aa5.82□□□□□ -1.48
CDH3-207ENST00000568292 BPY2O14599 106 aa5.81□□□□□ -1.48
CDH3-207ENST00000568292 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
CDH3-207ENST00000568292 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
CDH3-207ENST00000568292 LPAP08519 4548 aa5.79□□□□□ -1.48
CDH3-207ENST00000568292 NDUFS5O43920 106 aa5.79□□□□□ -1.48
CDH3-207ENST00000568292 LINC00575Q6W349 94 aa5.79□□□□□ -1.48
CDH3-207ENST00000568292 IGLV5-48A0A075B6I7 105 aa5.77□□□□□ -1.49
CDH3-207ENST00000568292 A0A1B0GW54 56 aa5.77□□□□□ -1.49
CDH3-207ENST00000568292 KRTAP13-3Q3SY46 172 aa5.77□□□□□ -1.49
CDH3-207ENST00000568292 LIMD2Q9BT23 127 aa5.77□□□□□ -1.49
CDH3-207ENST00000568292 OCR1Q9BZK8 76 aa5.77□□□□□ -1.49
CDH3-207ENST00000568292 SMIM29Q86T20 159 aa5.76□□□□□ -1.49
CDH3-207ENST00000568292 CYP4F30PQ9H0H9 118 aa5.76□□□□□ -1.49
CDH3-207ENST00000568292 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
CDH3-207ENST00000568292 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.74□□□□□ -1.49
CDH3-207ENST00000568292 NDUFB1O75438 58 aa5.73□□□□□ -1.49
CDH3-207ENST00000568292 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
CDH3-207ENST00000568292 IGKV4-1P06312 121 aa5.7□□□□□ -1.5
CDH3-207ENST00000568292 ASB16-AS1Q495Z4 193 aa5.7□□□□□ -1.5
CDH3-207ENST00000568292 ATP11AUNQ6ZP68 121 aa5.7□□□□□ -1.5
CDH3-207ENST00000568292 Q6ZQY7 126 aa5.7□□□□□ -1.5
CDH3-207ENST00000568292 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
CDH3-207ENST00000568292 A0A0G2JQZ4 141 aa5.68□□□□□ -1.5
CDH3-207ENST00000568292 XP32Q5T750 250 aa5.68□□□□□ -1.5
CDH3-207ENST00000568292 C1orf64Q8NEQ6 169 aa5.68□□□□□ -1.5
CDH3-207ENST00000568292 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
CDH3-207ENST00000568292 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
CDH3-207ENST00000568292 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
CDH3-207ENST00000568292 IGLV8-61A0A075B6I0 122 aa5.65□□□□□ -1.5
CDH3-207ENST00000568292 C9orf92A6NGG3 77 aa5.64□□□□□ -1.51
CDH3-207ENST00000568292 H3BPC8 53 aa5.63□□□□□ -1.51
CDH3-207ENST00000568292 IGFL1Q6UW32 110 aa5.63□□□□□ -1.51
CDH3-207ENST00000568292 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
CDH3-207ENST00000568292 PSPHP1O15172 72 aa5.61□□□□□ -1.51
CDH3-207ENST00000568292 Q5VV11 94 aa5.61□□□□□ -1.51
CDH3-207ENST00000568292 Q75L30 129 aa5.61□□□□□ -1.51
CDH3-207ENST00000568292 A8MUN3 132 aa5.6□□□□□ -1.51
CDH3-207ENST00000568292 C7orf65Q6ZTY9 151 aa5.6□□□□□ -1.51
CDH3-207ENST00000568292 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
CDH3-207ENST00000568292 LCA10Q71F78 164 aa5.59□□□□□ -1.51
CDH3-207ENST00000568292 LOC101927531A0A1B0GV80 90 aa5.58□□□□□ -1.52
CDH3-207ENST00000568292 A6NN06 94 aa5.58□□□□□ -1.52
CDH3-207ENST00000568292 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
CDH3-207ENST00000568292 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
CDH3-207ENST00000568292 MP68P56378 58 aa5.57□□□□□ -1.52
CDH3-207ENST00000568292 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
CDH3-207ENST00000568292 MUC17Q685J3 4493 aa5.57□□□□□ -1.52
CDH3-207ENST00000568292 HCG22E2RYF7 251 aa5.56□□□□□ -1.52
CDH3-207ENST00000568292 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
CDH3-207ENST00000568292 LINC00208Q96KT6 92 aa5.55□□□□□ -1.52
CDH3-207ENST00000568292 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
CDH3-207ENST00000568292 Q8N9L7 120 aa5.53□□□□□ -1.52
CDH3-207ENST00000568292 MUC2Q02817 5179 aa5.52□□□□□ -1.53
CDH3-207ENST00000568292 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
CDH3-207ENST00000568292 A6NED7 52 aa5.51□□□□□ -1.53
CDH3-207ENST00000568292 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
CDH3-207ENST00000568292 C8orf87E5RJ46 101 aa5.5□□□□□ -1.53
CDH3-207ENST00000568292 A0A087WSZ3 146 aa5.49□□□□□ -1.53
CDH3-207ENST00000568292 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
CDH3-207ENST00000568292 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
CDH3-207ENST00000568292 Q96NJ1 140 aa5.46□□□□□ -1.54
CDH3-207ENST00000568292 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
CDH3-207ENST00000568292 DSCR10P59022 87 aa5.45□□□□□ -1.54
CDH3-207ENST00000568292 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
CDH3-207ENST00000568292 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms