RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
SF3B3-208ENST00000567250 J3KT08 172 aa6.65□□□□□ -1.34
SF3B3-208ENST00000567250 NREPQ16612 68 aa6.62□□□□□ -1.35
SF3B3-208ENST00000567250 DEFB116Q30KQ4 102 aa6.62□□□□□ -1.35
SF3B3-208ENST00000567250 NDUFB1O75438 58 aa6.6□□□□□ -1.35
SF3B3-208ENST00000567250 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
SF3B3-208ENST00000567250 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
SF3B3-208ENST00000567250 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
SF3B3-208ENST00000567250 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
SF3B3-208ENST00000567250 DSCR10P59022 87 aa6.58□□□□□ -1.36
SF3B3-208ENST00000567250 LINC00313P59037 77 aa6.58□□□□□ -1.36
SF3B3-208ENST00000567250 ETDBQ3ZM63 59 aa6.58□□□□□ -1.36
SF3B3-208ENST00000567250 A0A0U1RQV1 116 aa6.56□□□□□ -1.36
SF3B3-208ENST00000567250 A8MWP4 228 aa6.56□□□□□ -1.36
SF3B3-208ENST00000567250 Q75L30 129 aa6.56□□□□□ -1.36
SF3B3-208ENST00000567250 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
SF3B3-208ENST00000567250 UBL5Q9BZL1 73 aa6.55□□□□□ -1.36
SF3B3-208ENST00000567250 C20orf166-AS1Q96NR2 134 aa6.54□□□□□ -1.36
SF3B3-208ENST00000567250 A0A1B0GV90 55 aa6.53□□□□□ -1.36
SF3B3-208ENST00000567250 BPY2O14599 106 aa6.53□□□□□ -1.36
SF3B3-208ENST00000567250 ATP11AUNQ6ZP68 121 aa6.53□□□□□ -1.36
SF3B3-208ENST00000567250 Q6ZVQ6 151 aa6.53□□□□□ -1.36
SF3B3-208ENST00000567250 A8MUU9 505 aa6.52□□□□□ -1.37
SF3B3-208ENST00000567250 MUC17Q685J3 4493 aa6.52□□□□□ -1.37
SF3B3-208ENST00000567250 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
SF3B3-208ENST00000567250 IGKV3D-7A0A0C4DH55 119 aa6.5□□□□□ -1.37
SF3B3-208ENST00000567250 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
SF3B3-208ENST00000567250 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
SF3B3-208ENST00000567250 LINC00846Q9NV44 126 aa6.5□□□□□ -1.37
SF3B3-208ENST00000567250 PRR15Q8IV56 129 aa6.49□□□□□ -1.37
SF3B3-208ENST00000567250 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
SF3B3-208ENST00000567250 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
SF3B3-208ENST00000567250 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
SF3B3-208ENST00000567250 K7EQZ3 153 aa6.47□□□□□ -1.37
SF3B3-208ENST00000567250 ACYP1P07311 99 aa6.47□□□□□ -1.37
SF3B3-208ENST00000567250 FAM240AA0A1B0GVK7 77 aa6.45□□□□□ -1.38
SF3B3-208ENST00000567250 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
SF3B3-208ENST00000567250 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
SF3B3-208ENST00000567250 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
SF3B3-208ENST00000567250 hDV103S1A0JD37 113 aa6.41□□□□□ -1.38
SF3B3-208ENST00000567250 CXCL6P80162 114 aa6.41□□□□□ -1.38
SF3B3-208ENST00000567250 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
SF3B3-208ENST00000567250 Q8N9P0 234 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-208ENST00000567250 MRPL34Q9BQ48 92 aaKnown RBP6.41□□□□□ -1.38
SF3B3-208ENST00000567250 MUC2Q02817 5179 aa6.41□□□□□ -1.38
SF3B3-208ENST00000567250 KRTAP4-12Q9BQ66 201 aa6.4□□□□□ -1.38
SF3B3-208ENST00000567250 Q8N9L7 120 aa6.39□□□□□ -1.39
SF3B3-208ENST00000567250 J3QR89 54 aa6.38□□□□□ -1.39
SF3B3-208ENST00000567250 ATP5EP2Q5VTU8 51 aa6.38□□□□□ -1.39
SF3B3-208ENST00000567250 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
SF3B3-208ENST00000567250 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
SF3B3-208ENST00000567250 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
SF3B3-208ENST00000567250 HCG22E2RYF7 251 aa6.36□□□□□ -1.39
SF3B3-208ENST00000567250 NDUFS5O43920 106 aa6.36□□□□□ -1.39
SF3B3-208ENST00000567250 WFDC13Q8IUB5 93 aa6.36□□□□□ -1.39
SF3B3-208ENST00000567250 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-208ENST00000567250 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
SF3B3-208ENST00000567250 COX6B2Q6YFQ2 88 aa6.31□□□□□ -1.4
SF3B3-208ENST00000567250 LINC00643Q86TS7 51 aa6.3□□□□□ -1.4
SF3B3-208ENST00000567250 FAT4Q6V0I7 4981 aa6.26□□□□□ -1.41
SF3B3-208ENST00000567250 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
SF3B3-208ENST00000567250 SPINK7P58062 85 aa6.25□□□□□ -1.41
SF3B3-208ENST00000567250 KRTAP19-2Q3LHN2 52 aa6.25□□□□□ -1.41
SF3B3-208ENST00000567250 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
SF3B3-208ENST00000567250 RBM12B-AS1Q9P1G2 102 aa6.25□□□□□ -1.41
SF3B3-208ENST00000567250 K7ERU9 68 aa6.23□□□□□ -1.41
SF3B3-208ENST00000567250 FAM236DA0A1B0GTK5 79 aa6.22□□□□□ -1.41
SF3B3-208ENST00000567250 FAM236CP0DP71 79 aa6.22□□□□□ -1.41
SF3B3-208ENST00000567250 HRES1P13985 223 aa6.22□□□□□ -1.41
SF3B3-208ENST00000567250 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
SF3B3-208ENST00000567250 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.42
SF3B3-208ENST00000567250 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
SF3B3-208ENST00000567250 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
SF3B3-208ENST00000567250 Q5W150 140 aa6.18□□□□□ -1.42
SF3B3-208ENST00000567250 MPLKIPQ8TAP9 179 aa6.18□□□□□ -1.42
SF3B3-208ENST00000567250 MT1HP80294 61 aa6.17□□□□□ -1.42
SF3B3-208ENST00000567250 A0A087WVE0 104 aa6.16□□□□□ -1.42
SF3B3-208ENST00000567250 M0R2T5 61 aa6.14□□□□□ -1.43
SF3B3-208ENST00000567250 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
SF3B3-208ENST00000567250 UQCRQO14949 82 aa6.11□□□□□ -1.43
SF3B3-208ENST00000567250 IMUPQ9GZP8 106 aa6.1□□□□□ -1.43
SF3B3-208ENST00000567250 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
SF3B3-208ENST00000567250 ATOX1O00244 68 aa6.09□□□□□ -1.43
SF3B3-208ENST00000567250 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
SF3B3-208ENST00000567250 LOC101927531A0A1B0GV80 90 aa6.07□□□□□ -1.44
SF3B3-208ENST00000567250 H0Y9P7 68 aa6.06□□□□□ -1.44
SF3B3-208ENST00000567250 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-208ENST00000567250 SCGB1A1P11684 91 aa6.05□□□□□ -1.44
SF3B3-208ENST00000567250 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
SF3B3-208ENST00000567250 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
SF3B3-208ENST00000567250 MT-ATP8P03928 68 aa6.04□□□□□ -1.44
SF3B3-208ENST00000567250 MP68P56378 58 aa6.03□□□□□ -1.44
SF3B3-208ENST00000567250 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
SF3B3-208ENST00000567250 OCR1Q9BZK8 76 aa6.03□□□□□ -1.44
SF3B3-208ENST00000567250 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
SF3B3-208ENST00000567250 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-208ENST00000567250 C4orf26Q17RF5 130 aa6.02□□□□□ -1.45
SF3B3-208ENST00000567250 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
SF3B3-208ENST00000567250 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
SF3B3-208ENST00000567250 C5orf47Q569G3 176 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 491.4 ms