RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 ATOX1O00244 68 aa5.76□□□□□ -1.49
TUBGCP4-211ENST00000566251 DSCR10P59022 87 aa5.76□□□□□ -1.49
TUBGCP4-211ENST00000566251 RPS29P62273 56 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-211ENST00000566251 DEFB116Q30KQ4 102 aa5.76□□□□□ -1.49
TUBGCP4-211ENST00000566251 HSPG2P98160 4391 aa5.76□□□□□ -1.49
TUBGCP4-211ENST00000566251 A0A087WVE0 104 aa5.74□□□□□ -1.49
TUBGCP4-211ENST00000566251 PRR15Q8IV56 129 aa5.74□□□□□ -1.49
TUBGCP4-211ENST00000566251 SMIM20Q8N5G0 67 aa5.74□□□□□ -1.49
TUBGCP4-211ENST00000566251 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
TUBGCP4-211ENST00000566251 Q8N9L7 120 aa5.73□□□□□ -1.49
TUBGCP4-211ENST00000566251 ANAPC13Q9BS18 74 aa5.73□□□□□ -1.49
TUBGCP4-211ENST00000566251 K7EQZ3 153 aa5.72□□□□□ -1.49
TUBGCP4-211ENST00000566251 Q96NJ1 140 aa5.72□□□□□ -1.49
TUBGCP4-211ENST00000566251 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
TUBGCP4-211ENST00000566251 HERC1Q15751 4861 aa5.7□□□□□ -1.5
TUBGCP4-211ENST00000566251 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
TUBGCP4-211ENST00000566251 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
TUBGCP4-211ENST00000566251 XP32Q5T750 250 aa5.69□□□□□ -1.5
TUBGCP4-211ENST00000566251 C1orf195Q5TG92 126 aa5.69□□□□□ -1.5
TUBGCP4-211ENST00000566251 IGHV6-1A0A0B4J1U7 121 aa5.68□□□□□ -1.5
TUBGCP4-211ENST00000566251 C8orf87E5RJ46 101 aa5.68□□□□□ -1.5
TUBGCP4-211ENST00000566251 CASC2Q6XLA1 102 aa5.68□□□□□ -1.5
TUBGCP4-211ENST00000566251 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
TUBGCP4-211ENST00000566251 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
TUBGCP4-211ENST00000566251 OXTP01178 125 aa5.66□□□□□ -1.5
TUBGCP4-211ENST00000566251 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
TUBGCP4-211ENST00000566251 hDV103S1A0JD37 113 aa5.65□□□□□ -1.5
TUBGCP4-211ENST00000566251 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
TUBGCP4-211ENST00000566251 C8orf17Q9NRJ1 99 aa5.65□□□□□ -1.5
TUBGCP4-211ENST00000566251 LINC00313P59037 77 aa5.63□□□□□ -1.51
TUBGCP4-211ENST00000566251 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
TUBGCP4-211ENST00000566251 UQCRQO14949 82 aa5.62□□□□□ -1.51
TUBGCP4-211ENST00000566251 COX7CP15954 63 aa5.62□□□□□ -1.51
TUBGCP4-211ENST00000566251 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
TUBGCP4-211ENST00000566251 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
TUBGCP4-211ENST00000566251 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
TUBGCP4-211ENST00000566251 FAT1Q14517 4588 aa5.6□□□□□ -1.51
TUBGCP4-211ENST00000566251 MRPL34Q9BQ48 92 aaKnown RBP5.6□□□□□ -1.51
TUBGCP4-211ENST00000566251 OCR1Q9BZK8 76 aa5.59□□□□□ -1.51
TUBGCP4-211ENST00000566251 PKHD1L1Q86WI1 4243 aa5.58□□□□□ -1.52
TUBGCP4-211ENST00000566251 NDUFS5O43920 106 aa5.58□□□□□ -1.52
TUBGCP4-211ENST00000566251 C5orf47Q569G3 176 aa5.58□□□□□ -1.52
TUBGCP4-211ENST00000566251 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
TUBGCP4-211ENST00000566251 FP248Q71RG6 208 aaPredicted RBP5.57□□□□□ -1.52
TUBGCP4-211ENST00000566251 MP68P56378 58 aa5.56□□□□□ -1.52
TUBGCP4-211ENST00000566251 H3BPC8 53 aa5.53□□□□□ -1.52
TUBGCP4-211ENST00000566251 CCDC179H3BU77 68 aa5.53□□□□□ -1.52
TUBGCP4-211ENST00000566251 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
TUBGCP4-211ENST00000566251 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
TUBGCP4-211ENST00000566251 NOTCH2NLQ7Z3S9 236 aa5.53□□□□□ -1.52
TUBGCP4-211ENST00000566251 C20orf197Q8N268 126 aa5.53□□□□□ -1.52
TUBGCP4-211ENST00000566251 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
TUBGCP4-211ENST00000566251 NDUFC1O43677 76 aa5.51□□□□□ -1.53
TUBGCP4-211ENST00000566251 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
TUBGCP4-211ENST00000566251 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
TUBGCP4-211ENST00000566251 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
TUBGCP4-211ENST00000566251 H0Y9P7 68 aa5.5□□□□□ -1.53
TUBGCP4-211ENST00000566251 MYCBP2O75592 4640 aa5.49□□□□□ -1.53
TUBGCP4-211ENST00000566251 IGLV7-46A0A075B6I9 117 aa5.49□□□□□ -1.53
TUBGCP4-211ENST00000566251 KLKP1Q107X0 134 aa5.49□□□□□ -1.53
TUBGCP4-211ENST00000566251 A0A0U1RQV1 116 aa5.47□□□□□ -1.53
TUBGCP4-211ENST00000566251 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
TUBGCP4-211ENST00000566251 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
TUBGCP4-211ENST00000566251 LINC00208Q96KT6 92 aa5.47□□□□□ -1.53
TUBGCP4-211ENST00000566251 SEC61GP60059 68 aa5.46□□□□□ -1.54
TUBGCP4-211ENST00000566251 PRR4Q16378 134 aa5.46□□□□□ -1.54
TUBGCP4-211ENST00000566251 C1orf64Q8NEQ6 169 aa5.46□□□□□ -1.54
TUBGCP4-211ENST00000566251 SNURFQ9Y675 71 aa5.46□□□□□ -1.54
TUBGCP4-211ENST00000566251 FLG2Q5D862 2391 aaPredicted RBP5.46□□□□□ -1.54
TUBGCP4-211ENST00000566251 LOC101927531A0A1B0GV80 90 aa5.43□□□□□ -1.54
TUBGCP4-211ENST00000566251 A8MUU9 505 aa5.43□□□□□ -1.54
TUBGCP4-211ENST00000566251 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
TUBGCP4-211ENST00000566251 TMEM258P61165 79 aa5.41□□□□□ -1.54
TUBGCP4-211ENST00000566251 ZCCHC13Q8WW36 166 aaKnown RBP5.41□□□□□ -1.54
TUBGCP4-211ENST00000566251 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
TUBGCP4-211ENST00000566251 TNXBP22105 4242 aa5.4□□□□□ -1.54
TUBGCP4-211ENST00000566251 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
TUBGCP4-211ENST00000566251 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
TUBGCP4-211ENST00000566251 Q5W150 140 aa5.39□□□□□ -1.55
TUBGCP4-211ENST00000566251 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
TUBGCP4-211ENST00000566251 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
TUBGCP4-211ENST00000566251 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
TUBGCP4-211ENST00000566251 H7BZZ5 65 aa5.38□□□□□ -1.55
TUBGCP4-211ENST00000566251 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
TUBGCP4-211ENST00000566251 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
TUBGCP4-211ENST00000566251 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
TUBGCP4-211ENST00000566251 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
TUBGCP4-211ENST00000566251 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
TUBGCP4-211ENST00000566251 CYP4F30PQ9H0H9 118 aa5.35□□□□□ -1.55
TUBGCP4-211ENST00000566251 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.55
TUBGCP4-211ENST00000566251 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
TUBGCP4-211ENST00000566251 FAM236CP0DP71 79 aa5.34□□□□□ -1.55
TUBGCP4-211ENST00000566251 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.55
TUBGCP4-211ENST00000566251 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
TUBGCP4-211ENST00000566251 CYSTM1Q9H1C7 97 aa5.34□□□□□ -1.55
TUBGCP4-211ENST00000566251 IGKV2D-30A0A075B6S6 120 aa5.33□□□□□ -1.56
TUBGCP4-211ENST00000566251 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
TUBGCP4-211ENST00000566251 PCOTHQ58A44 107 aa5.32□□□□□ -1.56
TUBGCP4-211ENST00000566251 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
TUBGCP4-211ENST00000566251 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms