RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 REV3LO60673 3130 aa6.05□□□□□ -1.44
SNX29-205ENST00000566228 KRTAP11-1Q8IUC1 163 aa6.05□□□□□ -1.44
SNX29-205ENST00000566228 KRTAP10-2P60368 255 aa6.03□□□□□ -1.44
SNX29-205ENST00000566228 FREM2Q5SZK8 3169 aa6.03□□□□□ -1.44
SNX29-205ENST00000566228 ITPR1Q14643 2758 aa6.01□□□□□ -1.45
SNX29-205ENST00000566228 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
SNX29-205ENST00000566228 Q6ZRN7 208 aaPredicted RBP6.01□□□□□ -1.45
SNX29-205ENST00000566228 FLNCQ14315 2725 aa6□□□□□ -1.45
SNX29-205ENST00000566228 KRTAP1-5Q9BYS1 174 aa5.99□□□□□ -1.45
SNX29-205ENST00000566228 A8MU10 97 aa5.99□□□□□ -1.45
SNX29-205ENST00000566228 NBPF19A0A087WUL8 3843 aa5.97□□□□□ -1.45
SNX29-205ENST00000566228 WDFY3Q8IZQ1 3526 aa5.97□□□□□ -1.45
SNX29-205ENST00000566228 CRYBG3Q68DQ2 2970 aa5.97□□□□□ -1.45
SNX29-205ENST00000566228 TENM1Q9UKZ4 2725 aa5.97□□□□□ -1.45
SNX29-205ENST00000566228 CFAP47Q6ZTR5 3102 aa5.96□□□□□ -1.46
SNX29-205ENST00000566228 FRYLO94915 3013 aa5.95□□□□□ -1.46
SNX29-205ENST00000566228 DSPP15924 2871 aaKnown RBP5.93□□□□□ -1.46
SNX29-205ENST00000566228 BOD1L1Q8NFC6 3051 aa5.91□□□□□ -1.46
SNX29-205ENST00000566228 DMXL1Q9Y485 3027 aa5.89□□□□□ -1.47
SNX29-205ENST00000566228 KALRNO60229 2985 aa5.89□□□□□ -1.47
SNX29-205ENST00000566228 DMXL2Q8TDJ6 3036 aa5.87□□□□□ -1.47
SNX29-205ENST00000566228 LRBAP50851 2863 aa5.86□□□□□ -1.47
SNX29-205ENST00000566228 FRYQ5TBA9 3013 aa5.84□□□□□ -1.47
SNX29-205ENST00000566228 NF1P21359 2839 aa5.84□□□□□ -1.47
SNX29-205ENST00000566228 KRTAP21-3Q3LHN1 58 aa5.81□□□□□ -1.48
SNX29-205ENST00000566228 DMDP11532 3685 aa5.81□□□□□ -1.48
SNX29-205ENST00000566228 PDZD2O15018 2839 aa5.78□□□□□ -1.48
SNX29-205ENST00000566228 HIVEP1P15822 2718 aa5.78□□□□□ -1.48
SNX29-205ENST00000566228 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
SNX29-205ENST00000566228 ATMQ13315 3056 aa5.77□□□□□ -1.49
SNX29-205ENST00000566228 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
SNX29-205ENST00000566228 LOC400499M0QZD8 3231 aa5.74□□□□□ -1.49
SNX29-205ENST00000566228 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
SNX29-205ENST00000566228 LAMA5O15230 3695 aa5.74□□□□□ -1.49
SNX29-205ENST00000566228 KRTAP13-2Q52LG2 175 aa5.74□□□□□ -1.49
SNX29-205ENST00000566228 COL12A1Q99715 3063 aa5.7□□□□□ -1.5
SNX29-205ENST00000566228 ADGRG4Q8IZF6 3080 aa5.69□□□□□ -1.5
SNX29-205ENST00000566228 TGP01266 2768 aa5.68□□□□□ -1.5
SNX29-205ENST00000566228 ASH1LQ9NR48 2969 aaKnown RBP5.68□□□□□ -1.5
SNX29-205ENST00000566228 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.5
SNX29-205ENST00000566228 NBEAQ8NFP9 2946 aa5.65□□□□□ -1.5
SNX29-205ENST00000566228 XP32Q5T750 250 aa5.65□□□□□ -1.51
SNX29-205ENST00000566228 DCHS1Q96JQ0 3298 aa5.65□□□□□ -1.51
SNX29-205ENST00000566228 CELSR2Q9HCU4 2923 aa5.64□□□□□ -1.51
SNX29-205ENST00000566228 RELNP78509 3460 aa5.63□□□□□ -1.51
SNX29-205ENST00000566228 H0YAA0 97 aa5.62□□□□□ -1.51
SNX29-205ENST00000566228 ZFHX4Q86UP3 3567 aa5.59□□□□□ -1.51
SNX29-205ENST00000566228 TENM4Q6N022 2769 aa5.58□□□□□ -1.52
SNX29-205ENST00000566228 MUC3AQ02505 3323 aa5.54□□□□□ -1.52
SNX29-205ENST00000566228 INE1O15225 51 aa5.53□□□□□ -1.52
SNX29-205ENST00000566228 SPENQ96T58 3664 aaKnown RBP5.52□□□□□ -1.53
SNX29-205ENST00000566228 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
SNX29-205ENST00000566228 TACC2O95359 2948 aa5.5□□□□□ -1.53
SNX29-205ENST00000566228 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
SNX29-205ENST00000566228 ZZEF1O43149 2961 aa5.5□□□□□ -1.53
SNX29-205ENST00000566228 CSMD1Q96PZ7 3565 aa5.48□□□□□ -1.53
SNX29-205ENST00000566228 ZFHX3Q15911 3703 aa5.47□□□□□ -1.53
SNX29-205ENST00000566228 TENM2Q9NT68 2774 aa5.47□□□□□ -1.53
SNX29-205ENST00000566228 SMG1Q96Q15 3661 aaKnown RBP5.46□□□□□ -1.53
SNX29-205ENST00000566228 BSNQ9UPA5 3926 aa5.45□□□□□ -1.54
SNX29-205ENST00000566228 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
SNX29-205ENST00000566228 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
SNX29-205ENST00000566228 KRTAP13-3Q3SY46 172 aa5.41□□□□□ -1.54
SNX29-205ENST00000566228 DCHS2Q6V1P9 2916 aa5.38□□□□□ -1.55
SNX29-205ENST00000566228 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
SNX29-205ENST00000566228 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
SNX29-205ENST00000566228 SRRM2Q9UQ35 2752 aaKnown RBP5.36□□□□□ -1.55
SNX29-205ENST00000566228 PKD1L1Q8TDX9 2849 aa5.33□□□□□ -1.56
SNX29-205ENST00000566228 CELSR1Q9NYQ6 3014 aa5.31□□□□□ -1.56
SNX29-205ENST00000566228 VWFP04275 2813 aa5.3□□□□□ -1.56
SNX29-205ENST00000566228 SVEP1Q4LDE5 3571 aa5.27□□□□□ -1.57
SNX29-205ENST00000566228 HRNRQ86YZ3 2850 aaPredicted RBP5.26□□□□□ -1.57
SNX29-205ENST00000566228 ZANQ9Y493 2812 aa5.25□□□□□ -1.57
SNX29-205ENST00000566228 CSMD2Q7Z408 3487 aa5.25□□□□□ -1.57
SNX29-205ENST00000566228 VPS13CQ709C8 3753 aa5.22□□□□□ -1.57
SNX29-205ENST00000566228 COL7A1Q02388 2944 aa5.21□□□□□ -1.58
SNX29-205ENST00000566228 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
SNX29-205ENST00000566228 FBN2P35556 2912 aa5.17□□□□□ -1.58
SNX29-205ENST00000566228 CUBNO60494 3623 aa5.08□□□□□ -1.6
SNX29-205ENST00000566228 ANK3Q12955 4377 aaKnown RBP5.07□□□□□ -1.6
SNX29-205ENST00000566228 AKAP9Q99996 3911 aa5.06□□□□□ -1.6
SNX29-205ENST00000566228 TRRAPQ9Y4A5 3859 aa5.06□□□□□ -1.6
SNX29-205ENST00000566228 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
SNX29-205ENST00000566228 ZNF469Q96JG9 3925 aaPredicted RBP5.02□□□□□ -1.61
SNX29-205ENST00000566228 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
SNX29-205ENST00000566228 FBN3Q75N90 2809 aa5.01□□□□□ -1.61
SNX29-205ENST00000566228 MEGF8Q7Z7M0 2845 aa5.01□□□□□ -1.61
SNX29-205ENST00000566228 MXRA5Q9NR99 2828 aa5□□□□□ -1.61
SNX29-205ENST00000566228 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
SNX29-205ENST00000566228 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
SNX29-205ENST00000566228 OTOGQ6ZRI0 2925 aa4.83□□□□□ -1.64
SNX29-205ENST00000566228 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
SNX29-205ENST00000566228 CRCT1Q9UGL9 99 aa4.82□□□□□ -1.64
SNX29-205ENST00000566228 HUWE1Q7Z6Z7 4374 aaKnown RBP4.82□□□□□ -1.64
SNX29-205ENST00000566228 CSMD3Q7Z407 3707 aa4.77□□□□□ -1.65
SNX29-205ENST00000566228 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
SNX29-205ENST00000566228 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
SNX29-205ENST00000566228 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
SNX29-205ENST00000566228 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
SNX29-205ENST00000566228 CMYA5Q8N3K9 4069 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms