RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZFHX4Q86UP3 3567 aa1.62□□□□□ -2.15
CHD9-218ENST00000566029 ASH1LQ9NR48 2969 aaKnown RBP1.62□□□□□ -2.15
CHD9-218ENST00000566029 KRTAP15-1Q3LI76 137 aa1.62□□□□□ -2.15
CHD9-218ENST00000566029 VCANP13611 3396 aa1.62□□□□□ -2.15
CHD9-218ENST00000566029 LAMA2P24043 3122 aaKnown RBP1.62□□□□□ -2.15
CHD9-218ENST00000566029 KALRNO60229 2985 aa1.61□□□□□ -2.15
CHD9-218ENST00000566029 TENM3Q9P273 2699 aa1.61□□□□□ -2.15
CHD9-218ENST00000566029 SPTBN5Q9NRC6 3674 aaKnown RBP1.6□□□□□ -2.15
CHD9-218ENST00000566029 PDZD2O15018 2839 aa1.6□□□□□ -2.15
CHD9-218ENST00000566029 UNC80Q8N2C7 3258 aa1.6□□□□□ -2.15
CHD9-218ENST00000566029 LRBAP50851 2863 aa1.59□□□□□ -2.15
CHD9-218ENST00000566029 CDH23Q9H251 3354 aa1.59□□□□□ -2.15
CHD9-218ENST00000566029 TRIOO75962 3097 aa1.59□□□□□ -2.15
CHD9-218ENST00000566029 NF1P21359 2839 aa1.59□□□□□ -2.15
CHD9-218ENST00000566029 PRUNE2Q8WUY3 3088 aa1.59□□□□□ -2.15
CHD9-218ENST00000566029 CFAP54Q96N23 3096 aa1.59□□□□□ -2.15
CHD9-218ENST00000566029 KRTAP10-11P60412 298 aa1.59□□□□□ -2.16
CHD9-218ENST00000566029 CRYBG3Q68DQ2 2970 aa1.59□□□□□ -2.16
CHD9-218ENST00000566029 ZZEF1O43149 2961 aa1.58□□□□□ -2.16
CHD9-218ENST00000566029 WDFY4Q6ZS81 3184 aa1.58□□□□□ -2.16
CHD9-218ENST00000566029 Q6ZRN7 208 aaPredicted RBP1.58□□□□□ -2.16
CHD9-218ENST00000566029 VPS13AQ96RL7 3174 aa1.58□□□□□ -2.16
CHD9-218ENST00000566029 KRTAP3-1Q9BYR8 98 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 SZT2Q5T011 3432 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 KRTAP13-2Q52LG2 175 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 KRTAP3-3Q9BYR6 98 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 KRTAP3-2Q9BYR7 98 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 VWFP04275 2813 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 MKI67P46013 3256 aaKnown RBP1.57□□□□□ -2.16
CHD9-218ENST00000566029 KRTAP10-8P60410 259 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 LAMA3Q16787 3333 aa1.57□□□□□ -2.16
CHD9-218ENST00000566029 TENM1Q9UKZ4 2725 aa1.56□□□□□ -2.16
CHD9-218ENST00000566029 TGP01266 2768 aa1.56□□□□□ -2.16
CHD9-218ENST00000566029 CELSR1Q9NYQ6 3014 aa1.56□□□□□ -2.16
CHD9-218ENST00000566029 COL6A3P12111 3177 aa1.56□□□□□ -2.16
CHD9-218ENST00000566029 XIRP2A4UGR9 3374 aa1.56□□□□□ -2.16
CHD9-218ENST00000566029 DCHS2Q6V1P9 2916 aa1.55□□□□□ -2.16
CHD9-218ENST00000566029 TACC2O95359 2948 aa1.55□□□□□ -2.16
CHD9-218ENST00000566029 ZFHX3Q15911 3703 aa1.55□□□□□ -2.16
CHD9-218ENST00000566029 KRTAP12-2P59991 146 aa1.55□□□□□ -2.16
CHD9-218ENST00000566029 HIVEP1P15822 2718 aa1.55□□□□□ -2.16
CHD9-218ENST00000566029 TENM2Q9NT68 2774 aa1.54□□□□□ -2.16
CHD9-218ENST00000566029 COL12A1Q99715 3063 aa1.54□□□□□ -2.16
CHD9-218ENST00000566029 PKD1L1Q8TDX9 2849 aa1.54□□□□□ -2.16
CHD9-218ENST00000566029 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
CHD9-218ENST00000566029 EYSQ5T1H1 3165 aa1.53□□□□□ -2.16
CHD9-218ENST00000566029 BOD1L1Q8NFC6 3051 aa1.53□□□□□ -2.16
CHD9-218ENST00000566029 SRRM2Q9UQ35 2752 aaKnown RBP1.53□□□□□ -2.16
CHD9-218ENST00000566029 DMXL1Q9Y485 3027 aa1.53□□□□□ -2.17
CHD9-218ENST00000566029 SMR3BP02814 79 aaPredicted RBP1.52□□□□□ -2.17
CHD9-218ENST00000566029 ASPMQ8IZT6 3477 aa1.52□□□□□ -2.17
CHD9-218ENST00000566029 WDFY3Q8IZQ1 3526 aa1.52□□□□□ -2.17
CHD9-218ENST00000566029 ADGRG4Q8IZF6 3080 aa1.52□□□□□ -2.17
CHD9-218ENST00000566029 KRTAP10-6P60371 365 aaPredicted RBP1.52□□□□□ -2.17
CHD9-218ENST00000566029 DNAH14Q0VDD8 3507 aa1.52□□□□□ -2.17
CHD9-218ENST00000566029 REV3LO60673 3130 aa1.52□□□□□ -2.17
CHD9-218ENST00000566029 TENM4Q6N022 2769 aa1.52□□□□□ -2.17
CHD9-218ENST00000566029 XP32Q5T750 250 aa1.51□□□□□ -2.17
CHD9-218ENST00000566029 ANK2Q01484 3957 aa1.51□□□□□ -2.17
CHD9-218ENST00000566029 DMXL2Q8TDJ6 3036 aa1.5□□□□□ -2.17
CHD9-218ENST00000566029 MYO15AQ9UKN7 3530 aa1.5□□□□□ -2.17
CHD9-218ENST00000566029 C5orf42Q9H799 3197 aa1.5□□□□□ -2.17
CHD9-218ENST00000566029 FBN1P35555 2871 aaKnown RBP1.5□□□□□ -2.17
CHD9-218ENST00000566029 DCHS1Q96JQ0 3298 aa1.49□□□□□ -2.17
CHD9-218ENST00000566029 LAMA1P25391 3075 aa1.49□□□□□ -2.17
CHD9-218ENST00000566029 CELSR2Q9HCU4 2923 aa1.49□□□□□ -2.17
CHD9-218ENST00000566029 KRTAP1-4P0C5Y4 121 aa1.49□□□□□ -2.17
CHD9-218ENST00000566029 TRRAPQ9Y4A5 3859 aa1.48□□□□□ -2.17
CHD9-218ENST00000566029 ATMQ13315 3056 aa1.47□□□□□ -2.17
CHD9-218ENST00000566029 LCE2AQ5TA79 106 aaPredicted RBP1.46□□□□□ -2.18
CHD9-218ENST00000566029 FREM2Q5SZK8 3169 aa1.46□□□□□ -2.18
CHD9-218ENST00000566029 CMYA5Q8N3K9 4069 aa1.46□□□□□ -2.18
CHD9-218ENST00000566029 MEGF8Q7Z7M0 2845 aa1.46□□□□□ -2.18
CHD9-218ENST00000566029 DNAH7Q8WXX0 4024 aa1.46□□□□□ -2.18
CHD9-218ENST00000566029 DNHD1Q96M86 4753 aa1.45□□□□□ -2.18
CHD9-218ENST00000566029 FRAS1Q86XX4 4008 aa1.45□□□□□ -2.18
CHD9-218ENST00000566029 DNAH6Q9C0G6 4158 aa1.45□□□□□ -2.18
CHD9-218ENST00000566029 DNAH3Q8TD57 4116 aa1.45□□□□□ -2.18
CHD9-218ENST00000566029 OTOGQ6ZRI0 2925 aa1.45□□□□□ -2.18
CHD9-218ENST00000566029 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
CHD9-218ENST00000566029 VPS13BQ7Z7G8 4022 aa1.44□□□□□ -2.18
CHD9-218ENST00000566029 HRNRQ86YZ3 2850 aaPredicted RBP1.43□□□□□ -2.18
CHD9-218ENST00000566029 ZANQ9Y493 2812 aa1.42□□□□□ -2.18
CHD9-218ENST00000566029 DMDP11532 3685 aa1.42□□□□□ -2.18
CHD9-218ENST00000566029 LORP23490 312 aaPredicted RBP1.42□□□□□ -2.18
CHD9-218ENST00000566029 CFAP47Q6ZTR5 3102 aa1.42□□□□□ -2.18
CHD9-218ENST00000566029 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
CHD9-218ENST00000566029 NBPF19A0A087WUL8 3843 aa1.42□□□□□ -2.18
CHD9-218ENST00000566029 PCLOQ9Y6V0 5065 aa1.42□□□□□ -2.18
CHD9-218ENST00000566029 COL7A1Q02388 2944 aa1.41□□□□□ -2.18
CHD9-218ENST00000566029 SPRR5A0A1B0GTR4 108 aa1.4□□□□□ -2.18
CHD9-218ENST00000566029 SPEGQ15772 3267 aa1.4□□□□□ -2.18
CHD9-218ENST00000566029 KRTAP10-1P60331 282 aa1.4□□□□□ -2.18
CHD9-218ENST00000566029 KRTAP10-2P60368 255 aa1.4□□□□□ -2.19
CHD9-218ENST00000566029 FBN2P35556 2912 aa1.39□□□□□ -2.19
CHD9-218ENST00000566029 BSNQ9UPA5 3926 aa1.39□□□□□ -2.19
CHD9-218ENST00000566029 RYR2Q92736 4967 aa1.39□□□□□ -2.19
CHD9-218ENST00000566029 ALMS1Q8TCU4 4167 aa1.38□□□□□ -2.19
CHD9-218ENST00000566029 BIRC6Q9NR09 4857 aa1.37□□□□□ -2.19
CHD9-218ENST00000566029 A0A1B0GVY2 172 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms