RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 C4orf48Q5BLP8 95 aa3.02□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 C8orf87E5RJ46 101 aa3.01□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 LINC00336Q6ZUF6 198 aa3.01□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 LIMD2Q9BT23 127 aa3.01□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 SPANXA2-OT1Q8N9U9 137 aa3□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 ASB16-AS1Q495Z4 193 aa3□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 HECTD4Q9Y4D8 3996 aa3□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 DNAH2Q9P225 4427 aa3□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 CYP4F30PQ9H0H9 118 aa3□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 C4orf26Q17RF5 130 aa2.99□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 Q5XG85 94 aa2.99□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 PRR4Q16378 134 aa2.99□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 LINC00313P59037 77 aa2.98□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 KMT2AQ03164 3969 aa2.98□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 MPLKIPQ8TAP9 179 aa2.98□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 PLA2G1BP04054 148 aaKnown RBP2.98□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 TYMSOSQ8TAI1 123 aa2.98□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 A0A087X002 238 aa2.97□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 LOC101927531A0A1B0GV80 90 aa2.97□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 V9GYY9 64 aa2.97□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 PCOTHQ58A44 107 aa2.97□□□□□ -1.93
DNAAF4-CCPG1-201ENST00000565113 KRTAP13-2Q52LG2 175 aa2.96□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 FP248Q71RG6 208 aaPredicted RBP2.96□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 DNHD1Q96M86 4753 aa2.96□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 FBN3Q75N90 2809 aa2.96□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 SPINK1P00995 79 aa2.96□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 IGLV7-46A0A075B6I9 117 aa2.95□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 DNAH8Q96JB1 4490 aa2.95□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 C1orf195Q5TG92 126 aa2.95□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 NOTCH2NLQ7Z3S9 236 aa2.95□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 FAM229AH3BQW9 127 aa2.95□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 SPAG11AQ6PDA7 123 aa2.95□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 KRTAP1-4P0C5Y4 121 aa2.94□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 SRRM2Q9UQ35 2752 aaKnown RBP2.94□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 Q1T7F1 81 aa2.93□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 LINC00304Q8N9R0 145 aa2.93□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 FRAS1Q86XX4 4008 aa2.93□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 TGP01266 2768 aa2.93□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 DNAH11Q96DT5 4516 aa2.93□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 COA5Q86WW8 74 aa2.92□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 KRTAP19-1Q8IUB9 90 aa2.92□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 RPS29P62273 56 aaKnown RBP2.92□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 SMR3BP02814 79 aaPredicted RBP2.92□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 PRR26Q8N8Z3 221 aa2.91□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 Q8N9P0 234 aaPredicted RBP2.91□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 KRTAP4-8A0A0G2JLE6 195 aa2.9□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 BRK1Q8WUW1 75 aa2.9□□□□□ -1.94
DNAAF4-CCPG1-201ENST00000565113 A0A1B0GVY2 172 aa2.9□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 ACYP2P14621 99 aa2.9□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 Q5W150 140 aa2.9□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 CHKB-CPT1BH3BT56 60 aa2.9□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 FAT2Q9NYQ8 4349 aa2.9□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 PKD1P98161 4303 aa2.89□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 PSPHP1O15172 72 aa2.89□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 KRTAP13-3Q3SY46 172 aa2.88□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 IGKV2-30P06310 120 aa2.88□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 HRES1P13985 223 aa2.87□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 A8MUN3 132 aa2.86□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 DMAC1Q96GE9 116 aa2.85□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 LRP1BQ9NZR2 4599 aa2.85□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 C7orf65Q6ZTY9 151 aa2.84□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.95
DNAAF4-CCPG1-201ENST00000565113 Q5VV11 94 aa2.83□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 VPS13BQ7Z7G8 4022 aa2.83□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 Q75L30 129 aa2.83□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 A6NED7 52 aa2.83□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 C9orf92A6NGG3 77 aa2.83□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 KRTAP4-7Q9BYR0 210 aa2.83□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 KRTAP10-4P60372 401 aaPredicted RBP2.82□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 Q5VSD8 79 aa2.81□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 SPTSSBQ8NFR3 76 aa2.81□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 A8MUU9 505 aa2.8□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 A0A1B0GU69 56 aa2.79□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 SEC61GP60059 68 aa2.79□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 PKHD1P08F94 4074 aa2.78□□□□□ -1.96
DNAAF4-CCPG1-201ENST00000565113 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 ATP11AUNQ6ZP68 121 aa2.77□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 Q8N1X5 172 aa2.77□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 APOBP04114 4563 aaKnown RBP2.76□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 KRTAP10-8P60410 259 aa2.76□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 SPINK7P58062 85 aa2.75□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 RYR2Q92736 4967 aa2.74□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 LCA10Q71F78 164 aa2.73□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 KRTAP4-9Q9BYQ8 210 aa2.73□□□□□ -1.97
DNAAF4-CCPG1-201ENST00000565113 UQCR11O14957 56 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms