RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 COX7CP15954 63 aa9□□□□□ -0.97
COMMD4-210ENST00000564587 UQCRQO14949 82 aa8.99□□□□□ -0.97
COMMD4-210ENST00000564587 HSPG2P98160 4391 aa8.99□□□□□ -0.97
COMMD4-210ENST00000564587 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
COMMD4-210ENST00000564587 CASC2Q6XLA1 102 aa8.95□□□□□ -0.98
COMMD4-210ENST00000564587 Q8N1X5 172 aa8.95□□□□□ -0.98
COMMD4-210ENST00000564587 C1orf195Q5TG92 126 aa8.94□□□□□ -0.98
COMMD4-210ENST00000564587 KRTAP29-1A8MX34 341 aaPredicted RBP8.93□□□□□ -0.98
COMMD4-210ENST00000564587 C8orf17Q9NRJ1 99 aa8.93□□□□□ -0.98
COMMD4-210ENST00000564587 MMP24-AS1A0A0U1RRL7 71 aa8.92□□□□□ -0.98
COMMD4-210ENST00000564587 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
COMMD4-210ENST00000564587 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
COMMD4-210ENST00000564587 OCR1Q9BZK8 76 aa8.92□□□□□ -0.98
COMMD4-210ENST00000564587 IGHV6-1A0A0B4J1U7 121 aa8.91□□□□□ -0.98
COMMD4-210ENST00000564587 hDV103S1A0JD37 113 aa8.9□□□□□ -0.98
COMMD4-210ENST00000564587 CCDC179H3BU77 68 aa8.9□□□□□ -0.98
COMMD4-210ENST00000564587 TMEM254Q8TBM7 123 aa8.87□□□□□ -0.99
COMMD4-210ENST00000564587 PKHD1L1Q86WI1 4243 aa8.86□□□□□ -0.99
COMMD4-210ENST00000564587 FAT1Q14517 4588 aa8.86□□□□□ -0.99
COMMD4-210ENST00000564587 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
COMMD4-210ENST00000564587 MRPL34Q9BQ48 92 aaKnown RBP8.84□□□□□ -0.99
COMMD4-210ENST00000564587 TP53AIP1Q9HCN2 124 aa8.84□□□□□ -0.99
COMMD4-210ENST00000564587 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
COMMD4-210ENST00000564587 LINC00313P59037 77 aa8.83□□□□□ -1
COMMD4-210ENST00000564587 C5orf47Q569G3 176 aa8.83□□□□□ -1
COMMD4-210ENST00000564587 C20orf197Q8N268 126 aa8.8□□□□□ -1
COMMD4-210ENST00000564587 KLKP1Q107X0 134 aa8.79□□□□□ -1
COMMD4-210ENST00000564587 MP68P56378 58 aa8.77□□□□□ -1.01
COMMD4-210ENST00000564587 H3BPC8 53 aa8.76□□□□□ -1.01
COMMD4-210ENST00000564587 NDUFC1O43677 76 aa8.76□□□□□ -1.01
COMMD4-210ENST00000564587 OXTP01178 125 aa8.76□□□□□ -1.01
COMMD4-210ENST00000564587 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
COMMD4-210ENST00000564587 NDUFS5O43920 106 aa8.74□□□□□ -1.01
COMMD4-210ENST00000564587 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
COMMD4-210ENST00000564587 TRAV22A0A0B4J277 110 aa8.71□□□□□ -1.02
COMMD4-210ENST00000564587 H0Y9P7 68 aa8.7□□□□□ -1.02
COMMD4-210ENST00000564587 Q8N9P0 234 aaPredicted RBP8.7□□□□□ -1.02
COMMD4-210ENST00000564587 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
COMMD4-210ENST00000564587 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
COMMD4-210ENST00000564587 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
COMMD4-210ENST00000564587 KRTAP16-1A8MUX0 517 aa8.67□□□□□ -1.02
COMMD4-210ENST00000564587 TMEM258P61165 79 aa8.67□□□□□ -1.02
COMMD4-210ENST00000564587 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
COMMD4-210ENST00000564587 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
COMMD4-210ENST00000564587 MT1HL1P0DM35 61 aa8.65□□□□□ -1.02
COMMD4-210ENST00000564587 LINC00208Q96KT6 92 aa8.64□□□□□ -1.03
COMMD4-210ENST00000564587 H7BZZ5 65 aa8.63□□□□□ -1.03
COMMD4-210ENST00000564587 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
COMMD4-210ENST00000564587 J3QL48 77 aa8.62□□□□□ -1.03
COMMD4-210ENST00000564587 C1orf64Q8NEQ6 169 aa8.62□□□□□ -1.03
COMMD4-210ENST00000564587 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
COMMD4-210ENST00000564587 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
COMMD4-210ENST00000564587 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
COMMD4-210ENST00000564587 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
COMMD4-210ENST00000564587 TNXBP22105 4242 aa8.56□□□□□ -1.04
COMMD4-210ENST00000564587 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
COMMD4-210ENST00000564587 C20orf166-AS1Q96NR2 134 aa8.55□□□□□ -1.04
COMMD4-210ENST00000564587 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
COMMD4-210ENST00000564587 FAM236DA0A1B0GTK5 79 aa8.54□□□□□ -1.04
COMMD4-210ENST00000564587 C9orf92A6NGG3 77 aa8.54□□□□□ -1.04
COMMD4-210ENST00000564587 A8MUU9 505 aa8.54□□□□□ -1.04
COMMD4-210ENST00000564587 FAM236CP0DP71 79 aa8.54□□□□□ -1.04
COMMD4-210ENST00000564587 Q5W150 140 aa8.54□□□□□ -1.04
COMMD4-210ENST00000564587 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
COMMD4-210ENST00000564587 LRP1Q07954 4544 aaKnown RBP8.51□□□□□ -1.05
COMMD4-210ENST00000564587 SPANXA2-OT1Q8N9U9 137 aa8.5□□□□□ -1.05
COMMD4-210ENST00000564587 Q75L30 129 aa8.49□□□□□ -1.05
COMMD4-210ENST00000564587 IGKV2-30P06310 120 aa8.46□□□□□ -1.06
COMMD4-210ENST00000564587 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
COMMD4-210ENST00000564587 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
COMMD4-210ENST00000564587 PRR4Q16378 134 aa8.43□□□□□ -1.06
COMMD4-210ENST00000564587 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
COMMD4-210ENST00000564587 PCOTHQ58A44 107 aa8.41□□□□□ -1.06
COMMD4-210ENST00000564587 SERP1Q9Y6X1 66 aa8.4□□□□□ -1.06
COMMD4-210ENST00000564587 TPRXLQ17RH7 258 aa8.39□□□□□ -1.07
COMMD4-210ENST00000564587 C7orf65Q6ZTY9 151 aa8.39□□□□□ -1.07
COMMD4-210ENST00000564587 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
COMMD4-210ENST00000564587 ATP11AUNQ6ZP68 121 aa8.37□□□□□ -1.07
COMMD4-210ENST00000564587 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
COMMD4-210ENST00000564587 XP32Q5T750 250 aa8.36□□□□□ -1.07
COMMD4-210ENST00000564587 HRES1P13985 223 aa8.31□□□□□ -1.08
COMMD4-210ENST00000564587 SPINK7P58062 85 aa8.25□□□□□ -1.09
COMMD4-210ENST00000564587 ACYP2P14621 99 aa8.23□□□□□ -1.09
COMMD4-210ENST00000564587 DMAC1Q96GE9 116 aa8.23□□□□□ -1.09
COMMD4-210ENST00000564587 SMIM26A0A096LP01 95 aa8.2□□□□□ -1.1
COMMD4-210ENST00000564587 A8MUN3 132 aa8.2□□□□□ -1.1
COMMD4-210ENST00000564587 LRP2P98164 4655 aa8.18□□□□□ -1.1
COMMD4-210ENST00000564587 COA5Q86WW8 74 aa8.17□□□□□ -1.1
COMMD4-210ENST00000564587 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
COMMD4-210ENST00000564587 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
COMMD4-210ENST00000564587 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
COMMD4-210ENST00000564587 CHKB-CPT1BH3BT56 60 aa8.09□□□□□ -1.11
COMMD4-210ENST00000564587 COX6B2Q6YFQ2 88 aa8.09□□□□□ -1.11
COMMD4-210ENST00000564587 V9GYY9 64 aa8.06□□□□□ -1.12
COMMD4-210ENST00000564587 KRTAP9-6A0A140TA67 174 aa8.04□□□□□ -1.12
COMMD4-210ENST00000564587 Q1T7F1 81 aa8.01□□□□□ -1.13
COMMD4-210ENST00000564587 SPTSSBQ8NFR3 76 aa7.99□□□□□ -1.13
COMMD4-210ENST00000564587 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
COMMD4-210ENST00000564587 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
COMMD4-210ENST00000564587 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms