RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 A0A1B0GVX0 72 aa7.53□□□□□ -1.2
SPG7-210ENST00000564409 J3KT08 172 aa7.53□□□□□ -1.2
SPG7-210ENST00000564409 HRES1P13985 223 aa7.51□□□□□ -1.21
SPG7-210ENST00000564409 VPS25Q9BRG1 176 aa7.51□□□□□ -1.21
SPG7-210ENST00000564409 C9JAW5 83 aa7.5□□□□□ -1.21
SPG7-210ENST00000564409 M0R143 59 aa7.5□□□□□ -1.21
SPG7-210ENST00000564409 MTURNQ8N3F0 131 aa7.49□□□□□ -1.21
SPG7-210ENST00000564409 TSTD3H0UI37 97 aa7.48□□□□□ -1.21
SPG7-210ENST00000564409 BAALC-AS2P0C853 105 aa7.48□□□□□ -1.21
SPG7-210ENST00000564409 LOC105371267A0A1B0GV96 52 aa7.47□□□□□ -1.21
SPG7-210ENST00000564409 A0A1B0GW54 56 aa7.47□□□□□ -1.21
SPG7-210ENST00000564409 NDUFB1O75438 58 aa7.46□□□□□ -1.22
SPG7-210ENST00000564409 Q6ZQT0 140 aa7.46□□□□□ -1.22
SPG7-210ENST00000564409 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
SPG7-210ENST00000564409 JMJD7-PLA2G4BH0Y9G9 81 aa7.44□□□□□ -1.22
SPG7-210ENST00000564409 MT2AP02795 61 aa7.44□□□□□ -1.22
SPG7-210ENST00000564409 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
SPG7-210ENST00000564409 PDE6GP18545 87 aa7.42□□□□□ -1.22
SPG7-210ENST00000564409 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
SPG7-210ENST00000564409 ATXN8Q156A1 80 aa7.41□□□□□ -1.22
SPG7-210ENST00000564409 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
SPG7-210ENST00000564409 SPINK7P58062 85 aa7.4□□□□□ -1.22
SPG7-210ENST00000564409 USH2AO75445 5202 aa7.4□□□□□ -1.23
SPG7-210ENST00000564409 A8MWP4 228 aa7.39□□□□□ -1.23
SPG7-210ENST00000564409 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
SPG7-210ENST00000564409 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
SPG7-210ENST00000564409 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
SPG7-210ENST00000564409 MT1FP04733 61 aa7.37□□□□□ -1.23
SPG7-210ENST00000564409 BATFQ16520 125 aa7.36□□□□□ -1.23
SPG7-210ENST00000564409 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
SPG7-210ENST00000564409 LYRM7Q5U5X0 104 aa7.35□□□□□ -1.23
SPG7-210ENST00000564409 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
SPG7-210ENST00000564409 IGKV3D-7A0A0C4DH55 119 aa7.32□□□□□ -1.24
SPG7-210ENST00000564409 NAA38Q9BRA0 125 aaKnown RBP7.32□□□□□ -1.24
SPG7-210ENST00000564409 LCE2BO14633 110 aa7.31□□□□□ -1.24
SPG7-210ENST00000564409 Q6ZVQ6 151 aa7.31□□□□□ -1.24
SPG7-210ENST00000564409 PRR15Q8IV56 129 aa7.3□□□□□ -1.24
SPG7-210ENST00000564409 NREPQ16612 68 aa7.29□□□□□ -1.24
SPG7-210ENST00000564409 C14orf132Q9NPU4 83 aa7.29□□□□□ -1.24
SPG7-210ENST00000564409 WFDC13Q8IUB5 93 aa7.28□□□□□ -1.24
SPG7-210ENST00000564409 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
SPG7-210ENST00000564409 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
SPG7-210ENST00000564409 FCGBPQ9Y6R7 5405 aaPredicted RBP7.24□□□□□ -1.25
SPG7-210ENST00000564409 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
SPG7-210ENST00000564409 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
SPG7-210ENST00000564409 LINC00846Q9NV44 126 aa7.24□□□□□ -1.25
SPG7-210ENST00000564409 TAX1BP3O14907 124 aa7.23□□□□□ -1.25
SPG7-210ENST00000564409 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
SPG7-210ENST00000564409 A0A1W2PPM0 123 aa7.21□□□□□ -1.26
SPG7-210ENST00000564409 hDV103S1A0JD37 113 aa7.2□□□□□ -1.26
SPG7-210ENST00000564409 H3BT86 120 aa7.19□□□□□ -1.26
SPG7-210ENST00000564409 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
SPG7-210ENST00000564409 COL5A1-AS1Q5SY13 56 aa7.18□□□□□ -1.26
SPG7-210ENST00000564409 K7EQZ3 153 aa7.16□□□□□ -1.26
SPG7-210ENST00000564409 NDUFS5O43920 106 aa7.16□□□□□ -1.26
SPG7-210ENST00000564409 MACF1Q9UPN3 7388 aaKnown RBP7.16□□□□□ -1.26
SPG7-210ENST00000564409 BPY2O14599 106 aa7.14□□□□□ -1.27
SPG7-210ENST00000564409 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
SPG7-210ENST00000564409 SPCS1Q9Y6A9 102 aa7.14□□□□□ -1.27
SPG7-210ENST00000564409 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
SPG7-210ENST00000564409 C7orf65Q6ZTY9 151 aa7.12□□□□□ -1.27
SPG7-210ENST00000564409 PCP4L1A6NKN8 68 aa7.1□□□□□ -1.27
SPG7-210ENST00000564409 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
SPG7-210ENST00000564409 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
SPG7-210ENST00000564409 CASC2Q6XLA1 102 aa7.07□□□□□ -1.28
SPG7-210ENST00000564409 Q5W150 140 aa7.06□□□□□ -1.28
SPG7-210ENST00000564409 CXCL6P80162 114 aa7.05□□□□□ -1.28
SPG7-210ENST00000564409 K7EP34 96 aa7.04□□□□□ -1.28
SPG7-210ENST00000564409 GTF2H5Q6ZYL4 71 aa7.03□□□□□ -1.28
SPG7-210ENST00000564409 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
SPG7-210ENST00000564409 Q8N9L7 120 aa7□□□□□ -1.29
SPG7-210ENST00000564409 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
SPG7-210ENST00000564409 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
SPG7-210ENST00000564409 C4orf26Q17RF5 130 aa6.97□□□□□ -1.29
SPG7-210ENST00000564409 PRO0461Q9UI25 63 aa6.97□□□□□ -1.29
SPG7-210ENST00000564409 F8W1H4 67 aa6.95□□□□□ -1.3
SPG7-210ENST00000564409 TP53AIP1Q9HCN2 124 aa6.89□□□□□ -1.31
SPG7-210ENST00000564409 KRTAP6-3Q3LI67 103 aa6.88□□□□□ -1.31
SPG7-210ENST00000564409 C5orf47Q569G3 176 aa6.88□□□□□ -1.31
SPG7-210ENST00000564409 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
SPG7-210ENST00000564409 S4R3F8 94 aa6.88□□□□□ -1.31
SPG7-210ENST00000564409 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
SPG7-210ENST00000564409 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
SPG7-210ENST00000564409 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
SPG7-210ENST00000564409 C1orf64Q8NEQ6 169 aa6.86□□□□□ -1.31
SPG7-210ENST00000564409 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
SPG7-210ENST00000564409 LCA10Q71F78 164 aa6.8□□□□□ -1.32
SPG7-210ENST00000564409 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
SPG7-210ENST00000564409 Q5VV11 94 aa6.78□□□□□ -1.32
SPG7-210ENST00000564409 A6NN06 94 aa6.76□□□□□ -1.33
SPG7-210ENST00000564409 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
SPG7-210ENST00000564409 ACYP1P07311 99 aa6.75□□□□□ -1.33
SPG7-210ENST00000564409 MT1BP07438 61 aa6.74□□□□□ -1.33
SPG7-210ENST00000564409 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
SPG7-210ENST00000564409 NEBP20929 6669 aa6.73□□□□□ -1.33
SPG7-210ENST00000564409 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
SPG7-210ENST00000564409 A0A1B0GV90 55 aa6.7□□□□□ -1.34
SPG7-210ENST00000564409 LOC101927531A0A1B0GV80 90 aa6.69□□□□□ -1.34
SPG7-210ENST00000564409 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
SPG7-210ENST00000564409 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms