RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 LINC00313P59037 77 aa4.71□□□□□ -1.66
PTPN9-203ENST00000563835 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
PTPN9-203ENST00000563835 RBM3P98179 157 aaKnown RBP4.7□□□□□ -1.66
PTPN9-203ENST00000563835 BAALC-AS2P0C853 105 aa4.69□□□□□ -1.66
PTPN9-203ENST00000563835 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
PTPN9-203ENST00000563835 SPCS1Q9Y6A9 102 aa4.68□□□□□ -1.66
PTPN9-203ENST00000563835 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
PTPN9-203ENST00000563835 K7EP34 96 aa4.67□□□□□ -1.66
PTPN9-203ENST00000563835 MTURNQ8N3F0 131 aa4.67□□□□□ -1.66
PTPN9-203ENST00000563835 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
PTPN9-203ENST00000563835 C9JAW5 83 aa4.66□□□□□ -1.66
PTPN9-203ENST00000563835 ATXN8Q156A1 80 aa4.66□□□□□ -1.66
PTPN9-203ENST00000563835 HRES1P13985 223 aa4.65□□□□□ -1.67
PTPN9-203ENST00000563835 Q6ZQT0 140 aa4.65□□□□□ -1.67
PTPN9-203ENST00000563835 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
PTPN9-203ENST00000563835 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
PTPN9-203ENST00000563835 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
PTPN9-203ENST00000563835 LOC110117498A0A087WWA1 95 aa4.62□□□□□ -1.67
PTPN9-203ENST00000563835 FAM236DA0A1B0GTK5 79 aa4.62□□□□□ -1.67
PTPN9-203ENST00000563835 FAM236CP0DP71 79 aa4.62□□□□□ -1.67
PTPN9-203ENST00000563835 SMCPP49901 116 aaPredicted RBP4.62□□□□□ -1.67
PTPN9-203ENST00000563835 LYRM7Q5U5X0 104 aa4.62□□□□□ -1.67
PTPN9-203ENST00000563835 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
PTPN9-203ENST00000563835 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
PTPN9-203ENST00000563835 JMJD7-PLA2G4BH0Y9G9 81 aa4.61□□□□□ -1.67
PTPN9-203ENST00000563835 J3KT08 172 aa4.61□□□□□ -1.67
PTPN9-203ENST00000563835 GTF2H5Q6ZYL4 71 aa4.6□□□□□ -1.67
PTPN9-203ENST00000563835 ZCCHC13Q8WW36 166 aaKnown RBP4.6□□□□□ -1.67
PTPN9-203ENST00000563835 IGKV3D-7A0A0C4DH55 119 aa4.59□□□□□ -1.67
PTPN9-203ENST00000563835 A8MWP4 228 aa4.59□□□□□ -1.67
PTPN9-203ENST00000563835 C21orf62-AS1Q17RA5 79 aa4.58□□□□□ -1.68
PTPN9-203ENST00000563835 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
PTPN9-203ENST00000563835 RBM12B-AS1Q9P1G2 102 aa4.58□□□□□ -1.68
PTPN9-203ENST00000563835 USH2AO75445 5202 aa4.58□□□□□ -1.68
PTPN9-203ENST00000563835 MT2AP02795 61 aa4.57□□□□□ -1.68
PTPN9-203ENST00000563835 Q8N9P0 234 aaPredicted RBP4.57□□□□□ -1.68
PTPN9-203ENST00000563835 NDUFB1O75438 58 aa4.56□□□□□ -1.68
PTPN9-203ENST00000563835 SPINK7P58062 85 aa4.56□□□□□ -1.68
PTPN9-203ENST00000563835 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
PTPN9-203ENST00000563835 MT1FP04733 61 aa4.55□□□□□ -1.68
PTPN9-203ENST00000563835 PDE6GP18545 87 aa4.55□□□□□ -1.68
PTPN9-203ENST00000563835 MMP24-AS1A0A0U1RRL7 71 aa4.54□□□□□ -1.68
PTPN9-203ENST00000563835 A0A1B0GW54 56 aa4.54□□□□□ -1.68
PTPN9-203ENST00000563835 H3BT86 120 aa4.54□□□□□ -1.68
PTPN9-203ENST00000563835 Q6ZVQ6 151 aa4.54□□□□□ -1.68
PTPN9-203ENST00000563835 F8W1H4 67 aa4.53□□□□□ -1.68
PTPN9-203ENST00000563835 NREPQ16612 68 aa4.53□□□□□ -1.68
PTPN9-203ENST00000563835 ETDBQ3ZM63 59 aa4.53□□□□□ -1.68
PTPN9-203ENST00000563835 PRR15Q8IV56 129 aa4.53□□□□□ -1.68
PTPN9-203ENST00000563835 K7EQZ3 153 aa4.52□□□□□ -1.69
PTPN9-203ENST00000563835 WFDC13Q8IUB5 93 aa4.52□□□□□ -1.69
PTPN9-203ENST00000563835 TMEM254Q8TBM7 123 aa4.5□□□□□ -1.69
PTPN9-203ENST00000563835 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
PTPN9-203ENST00000563835 LCE2BO14633 110 aa4.49□□□□□ -1.69
PTPN9-203ENST00000563835 hDV103S1A0JD37 113 aa4.48□□□□□ -1.69
PTPN9-203ENST00000563835 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
PTPN9-203ENST00000563835 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
PTPN9-203ENST00000563835 Q8N9L7 120 aa4.47□□□□□ -1.69
PTPN9-203ENST00000563835 BPY2O14599 106 aa4.46□□□□□ -1.7
PTPN9-203ENST00000563835 NDUFS5O43920 106 aa4.46□□□□□ -1.7
PTPN9-203ENST00000563835 Q5W150 140 aa4.44□□□□□ -1.7
PTPN9-203ENST00000563835 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
PTPN9-203ENST00000563835 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
PTPN9-203ENST00000563835 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.41□□□□□ -1.7
PTPN9-203ENST00000563835 CASC2Q6XLA1 102 aa4.41□□□□□ -1.7
PTPN9-203ENST00000563835 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
PTPN9-203ENST00000563835 HCG22E2RYF7 251 aa4.4□□□□□ -1.71
PTPN9-203ENST00000563835 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.71
PTPN9-203ENST00000563835 LINC00846Q9NV44 126 aa4.4□□□□□ -1.71
PTPN9-203ENST00000563835 C7orf65Q6ZTY9 151 aa4.39□□□□□ -1.71
PTPN9-203ENST00000563835 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
PTPN9-203ENST00000563835 K7ERU9 68 aa4.37□□□□□ -1.71
PTPN9-203ENST00000563835 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
PTPN9-203ENST00000563835 UBL5Q9BZL1 73 aa4.35□□□□□ -1.71
PTPN9-203ENST00000563835 FAM240AA0A1B0GVK7 77 aa4.34□□□□□ -1.71
PTPN9-203ENST00000563835 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
PTPN9-203ENST00000563835 J3QR89 54 aa4.34□□□□□ -1.71
PTPN9-203ENST00000563835 CXCL6P80162 114 aa4.34□□□□□ -1.71
PTPN9-203ENST00000563835 ACYP1P07311 99 aa4.31□□□□□ -1.72
PTPN9-203ENST00000563835 MT-ATP8P03928 68 aa4.3□□□□□ -1.72
PTPN9-203ENST00000563835 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
PTPN9-203ENST00000563835 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
PTPN9-203ENST00000563835 C5orf47Q569G3 176 aa4.28□□□□□ -1.72
PTPN9-203ENST00000563835 LINC00643Q86TS7 51 aa4.26□□□□□ -1.73
PTPN9-203ENST00000563835 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
PTPN9-203ENST00000563835 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
PTPN9-203ENST00000563835 S4R3F8 94 aa4.25□□□□□ -1.73
PTPN9-203ENST00000563835 A0A087WVE0 104 aa4.24□□□□□ -1.73
PTPN9-203ENST00000563835 LCA10Q71F78 164 aa4.24□□□□□ -1.73
PTPN9-203ENST00000563835 ATP5EP2Q5VTU8 51 aa4.22□□□□□ -1.73
PTPN9-203ENST00000563835 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
PTPN9-203ENST00000563835 FAM236AA0A1B0GUQ0 79 aa4.2□□□□□ -1.74
PTPN9-203ENST00000563835 FAM236BA0A1B0GV22 79 aa4.2□□□□□ -1.74
PTPN9-203ENST00000563835 HIST1H4AP62805 103 aaKnown RBP4.2□□□□□ -1.74
PTPN9-203ENST00000563835 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
PTPN9-203ENST00000563835 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
PTPN9-203ENST00000563835 KRTAP3-3Q9BYR6 98 aa4.18□□□□□ -1.74
PTPN9-203ENST00000563835 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
PTPN9-203ENST00000563835 CSAG1Q6PB30 78 aa4.17□□□□□ -1.74
PTPN9-203ENST00000563835 MT1BP07438 61 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms