RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
SMPD3-205ENST00000563455 TRAV7A0A075B6U4 112 aa8.1□□□□□ -1.11
SMPD3-205ENST00000563455 HCG22E2RYF7 251 aa8.1□□□□□ -1.11
SMPD3-205ENST00000563455 COX7CP15954 63 aa8.1□□□□□ -1.11
SMPD3-205ENST00000563455 K7EQZ3 153 aa8.09□□□□□ -1.11
SMPD3-205ENST00000563455 HRCT1Q6UXD1 115 aa8.09□□□□□ -1.11
SMPD3-205ENST00000563455 Q8N9L7 120 aa8.07□□□□□ -1.12
SMPD3-205ENST00000563455 Q96NJ1 140 aa8.07□□□□□ -1.12
SMPD3-205ENST00000563455 DEFB116Q30KQ4 102 aa8.04□□□□□ -1.12
SMPD3-205ENST00000563455 LINC00304Q8N9R0 145 aa8.04□□□□□ -1.12
SMPD3-205ENST00000563455 A0A1B0GVX0 72 aa8.03□□□□□ -1.12
SMPD3-205ENST00000563455 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
SMPD3-205ENST00000563455 CASC2Q6XLA1 102 aa8.02□□□□□ -1.13
SMPD3-205ENST00000563455 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
SMPD3-205ENST00000563455 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
SMPD3-205ENST00000563455 OCR1Q9BZK8 76 aa8□□□□□ -1.13
SMPD3-205ENST00000563455 TP53AIP1Q9HCN2 124 aa8□□□□□ -1.13
SMPD3-205ENST00000563455 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
SMPD3-205ENST00000563455 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
SMPD3-205ENST00000563455 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
SMPD3-205ENST00000563455 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
SMPD3-205ENST00000563455 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
SMPD3-205ENST00000563455 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
SMPD3-205ENST00000563455 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
SMPD3-205ENST00000563455 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
SMPD3-205ENST00000563455 MMP24-AS1A0A0U1RRL7 71 aa7.96□□□□□ -1.14
SMPD3-205ENST00000563455 IGHV6-1A0A0B4J1U7 121 aa7.95□□□□□ -1.14
SMPD3-205ENST00000563455 CCDC179H3BU77 68 aa7.95□□□□□ -1.14
SMPD3-205ENST00000563455 NDUFC1O43677 76 aa7.95□□□□□ -1.14
SMPD3-205ENST00000563455 H3BPC8 53 aa7.94□□□□□ -1.14
SMPD3-205ENST00000563455 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
SMPD3-205ENST00000563455 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
SMPD3-205ENST00000563455 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
SMPD3-205ENST00000563455 MP68P56378 58 aa7.91□□□□□ -1.14
SMPD3-205ENST00000563455 LINC00313P59037 77 aa7.91□□□□□ -1.14
SMPD3-205ENST00000563455 MRPL34Q9BQ48 92 aaKnown RBP7.91□□□□□ -1.14
SMPD3-205ENST00000563455 C20orf197Q8N268 126 aa7.89□□□□□ -1.15
SMPD3-205ENST00000563455 KRTAP10-8P60410 259 aa7.88□□□□□ -1.15
SMPD3-205ENST00000563455 TMEM258P61165 79 aa7.84□□□□□ -1.15
SMPD3-205ENST00000563455 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
SMPD3-205ENST00000563455 TRAV22A0A0B4J277 110 aa7.82□□□□□ -1.16
SMPD3-205ENST00000563455 NDUFS5O43920 106 aa7.81□□□□□ -1.16
SMPD3-205ENST00000563455 FP248Q71RG6 208 aaPredicted RBP7.81□□□□□ -1.16
SMPD3-205ENST00000563455 Q8N9P0 234 aaPredicted RBP7.81□□□□□ -1.16
SMPD3-205ENST00000563455 ATP5EP56381 51 aaPredicted RBP7.8□□□□□ -1.16
SMPD3-205ENST00000563455 H0Y9P7 68 aa7.79□□□□□ -1.16
SMPD3-205ENST00000563455 TNXBP22105 4242 aa7.77□□□□□ -1.17
SMPD3-205ENST00000563455 NOTCH2NLQ7Z3S9 236 aa7.76□□□□□ -1.17
SMPD3-205ENST00000563455 ZCCHC13Q8WW36 166 aaKnown RBP7.76□□□□□ -1.17
SMPD3-205ENST00000563455 SNURFQ9Y675 71 aa7.76□□□□□ -1.17
SMPD3-205ENST00000563455 H7BZZ5 65 aa7.75□□□□□ -1.17
SMPD3-205ENST00000563455 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
SMPD3-205ENST00000563455 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
SMPD3-205ENST00000563455 C1orf64Q8NEQ6 169 aa7.73□□□□□ -1.17
SMPD3-205ENST00000563455 KRTAP16-1A8MUX0 517 aa7.72□□□□□ -1.17
SMPD3-205ENST00000563455 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
SMPD3-205ENST00000563455 LRP2P98164 4655 aa7.69□□□□□ -1.18
SMPD3-205ENST00000563455 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
SMPD3-205ENST00000563455 FAM236DA0A1B0GTK5 79 aa7.68□□□□□ -1.18
SMPD3-205ENST00000563455 FAM236CP0DP71 79 aa7.68□□□□□ -1.18
SMPD3-205ENST00000563455 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
SMPD3-205ENST00000563455 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
SMPD3-205ENST00000563455 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
SMPD3-205ENST00000563455 A8MUU9 505 aa7.64□□□□□ -1.19
SMPD3-205ENST00000563455 KRTAP13-3Q3SY46 172 aa7.64□□□□□ -1.19
SMPD3-205ENST00000563455 IGLV7-46A0A075B6I9 117 aa7.61□□□□□ -1.19
SMPD3-205ENST00000563455 PRR4Q16378 134 aa7.61□□□□□ -1.19
SMPD3-205ENST00000563455 Q75L30 129 aa7.61□□□□□ -1.19
SMPD3-205ENST00000563455 Q5W150 140 aa7.6□□□□□ -1.19
SMPD3-205ENST00000563455 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
SMPD3-205ENST00000563455 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.19
SMPD3-205ENST00000563455 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
SMPD3-205ENST00000563455 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
SMPD3-205ENST00000563455 C9orf92A6NGG3 77 aa7.55□□□□□ -1.2
SMPD3-205ENST00000563455 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
SMPD3-205ENST00000563455 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.21
SMPD3-205ENST00000563455 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
SMPD3-205ENST00000563455 PCOTHQ58A44 107 aa7.48□□□□□ -1.21
SMPD3-205ENST00000563455 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
SMPD3-205ENST00000563455 IGKV2D-30A0A075B6S6 120 aa7.46□□□□□ -1.22
SMPD3-205ENST00000563455 LPAP08519 4548 aa7.46□□□□□ -1.22
SMPD3-205ENST00000563455 A8MUN3 132 aa7.43□□□□□ -1.22
SMPD3-205ENST00000563455 ACYP2P14621 99 aa7.43□□□□□ -1.22
SMPD3-205ENST00000563455 XP32Q5T750 250 aa7.43□□□□□ -1.22
SMPD3-205ENST00000563455 SMIM26A0A096LP01 95 aa7.42□□□□□ -1.22
SMPD3-205ENST00000563455 HRES1P13985 223 aa7.42□□□□□ -1.22
SMPD3-205ENST00000563455 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
SMPD3-205ENST00000563455 MUC2Q02817 5179 aa7.37□□□□□ -1.23
SMPD3-205ENST00000563455 SPINK7P58062 85 aa7.37□□□□□ -1.23
SMPD3-205ENST00000563455 V9GYY9 64 aa7.34□□□□□ -1.23
SMPD3-205ENST00000563455 COA5Q86WW8 74 aa7.33□□□□□ -1.24
SMPD3-205ENST00000563455 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
SMPD3-205ENST00000563455 CHKB-CPT1BH3BT56 60 aa7.27□□□□□ -1.25
SMPD3-205ENST00000563455 SPTSSBQ8NFR3 76 aa7.26□□□□□ -1.25
SMPD3-205ENST00000563455 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
SMPD3-205ENST00000563455 Q1T7F1 81 aa7.24□□□□□ -1.25
SMPD3-205ENST00000563455 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
SMPD3-205ENST00000563455 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
SMPD3-205ENST00000563455 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
SMPD3-205ENST00000563455 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms