RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 UBE2V1Q13404 147 aa10.3□□□□□ -0.76
CHD9-208ENST00000563410 HSD52Q0P140 79 aa10.29□□□□□ -0.76
CHD9-208ENST00000563410 A0A1B0GVX0 72 aa10.28□□□□□ -0.76
CHD9-208ENST00000563410 C8orf87E5RJ46 101 aa10.28□□□□□ -0.76
CHD9-208ENST00000563410 COX6CP09669 75 aa10.28□□□□□ -0.76
CHD9-208ENST00000563410 VPS25Q9BRG1 176 aa10.24□□□□□ -0.77
CHD9-208ENST00000563410 ZCCHC13Q8WW36 166 aaKnown RBP10.23□□□□□ -0.77
CHD9-208ENST00000563410 RBM3P98179 157 aaKnown RBP10.21□□□□□ -0.77
CHD9-208ENST00000563410 PYY3Q5JQD4 70 aa10.21□□□□□ -0.77
CHD9-208ENST00000563410 MTURNQ8N3F0 131 aa10.2□□□□□ -0.78
CHD9-208ENST00000563410 SPINK7P58062 85 aa10.19□□□□□ -0.78
CHD9-208ENST00000563410 DSCR8Q96T75 97 aa10.18□□□□□ -0.78
CHD9-208ENST00000563410 J3KT08 172 aa10.15□□□□□ -0.78
CHD9-208ENST00000563410 Q8N9P0 234 aaPredicted RBP10.14□□□□□ -0.79
CHD9-208ENST00000563410 Q6ZQT0 140 aa10.13□□□□□ -0.79
CHD9-208ENST00000563410 MACF1Q9UPN3 7388 aaKnown RBP10.13□□□□□ -0.79
CHD9-208ENST00000563410 SCGB1C2P0DMR2 95 aa10.12□□□□□ -0.79
CHD9-208ENST00000563410 C9JAW5 83 aa10.11□□□□□ -0.79
CHD9-208ENST00000563410 C21orf62-AS1Q17RA5 79 aa10.11□□□□□ -0.79
CHD9-208ENST00000563410 TMA7Q9Y2S6 64 aaKnown RBP10.11□□□□□ -0.79
CHD9-208ENST00000563410 BAALC-AS2P0C853 105 aa10.1□□□□□ -0.79
CHD9-208ENST00000563410 UQCR10Q9UDW1 63 aa10.1□□□□□ -0.79
CHD9-208ENST00000563410 SYNE2Q8WXH0 6885 aaKnown RBP10.08□□□□□ -0.8
CHD9-208ENST00000563410 NDUFB1O75438 58 aa10.06□□□□□ -0.8
CHD9-208ENST00000563410 KRTAP19-6Q3LI70 58 aa10.06□□□□□ -0.8
CHD9-208ENST00000563410 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
CHD9-208ENST00000563410 C8orf17Q9NRJ1 99 aa10.06□□□□□ -0.8
CHD9-208ENST00000563410 A8MWP4 228 aa10.04□□□□□ -0.8
CHD9-208ENST00000563410 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
CHD9-208ENST00000563410 LYRM7Q5U5X0 104 aa9.99□□□□□ -0.81
CHD9-208ENST00000563410 LINC00846Q9NV44 126 aa9.99□□□□□ -0.81
CHD9-208ENST00000563410 LOC110117498A0A087WWA1 95 aa9.97□□□□□ -0.81
CHD9-208ENST00000563410 A0A1B0GW54 56 aa9.97□□□□□ -0.81
CHD9-208ENST00000563410 Q6ZVQ6 151 aa9.97□□□□□ -0.81
CHD9-208ENST00000563410 JMJD7-PLA2G4BH0Y9G9 81 aa9.96□□□□□ -0.82
CHD9-208ENST00000563410 ATXN8Q156A1 80 aa9.92□□□□□ -0.82
CHD9-208ENST00000563410 PRR15Q8IV56 129 aa9.92□□□□□ -0.82
CHD9-208ENST00000563410 NAA38Q9BRA0 125 aaKnown RBP9.91□□□□□ -0.82
CHD9-208ENST00000563410 PDE6GP18545 87 aa9.9□□□□□ -0.82
CHD9-208ENST00000563410 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
CHD9-208ENST00000563410 C14orf132Q9NPU4 83 aa9.89□□□□□ -0.83
CHD9-208ENST00000563410 TMEM254Q8TBM7 123 aa9.87□□□□□ -0.83
CHD9-208ENST00000563410 MRPL34Q9BQ48 92 aaKnown RBP9.87□□□□□ -0.83
CHD9-208ENST00000563410 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
CHD9-208ENST00000563410 NREPQ16612 68 aa9.85□□□□□ -0.83
CHD9-208ENST00000563410 M0R143 59 aa9.8□□□□□ -0.84
CHD9-208ENST00000563410 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
CHD9-208ENST00000563410 K7EQZ3 153 aa9.78□□□□□ -0.84
CHD9-208ENST00000563410 NDUFS5O43920 106 aa9.76□□□□□ -0.85
CHD9-208ENST00000563410 KRTAP6-3Q3LI67 103 aa9.75□□□□□ -0.85
CHD9-208ENST00000563410 SMIM6P0DI80 62 aa9.73□□□□□ -0.85
CHD9-208ENST00000563410 IGKV2D-30A0A075B6S6 120 aa9.72□□□□□ -0.85
CHD9-208ENST00000563410 IGKV2-30P06310 120 aa9.72□□□□□ -0.85
CHD9-208ENST00000563410 Q5W150 140 aa9.72□□□□□ -0.85
CHD9-208ENST00000563410 C7orf65Q6ZTY9 151 aa9.69□□□□□ -0.86
CHD9-208ENST00000563410 BPY2O14599 106 aa9.63□□□□□ -0.87
CHD9-208ENST00000563410 H3BT86 120 aa9.61□□□□□ -0.87
CHD9-208ENST00000563410 C4orf26Q17RF5 130 aa9.6□□□□□ -0.87
CHD9-208ENST00000563410 LOC105371267A0A1B0GV96 52 aa9.59□□□□□ -0.87
CHD9-208ENST00000563410 Q8N9L7 120 aa9.59□□□□□ -0.87
CHD9-208ENST00000563410 TSTD3H0UI37 97 aa9.58□□□□□ -0.88
CHD9-208ENST00000563410 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
CHD9-208ENST00000563410 CASC2Q6XLA1 102 aa9.57□□□□□ -0.88
CHD9-208ENST00000563410 BATFQ16520 125 aa9.56□□□□□ -0.88
CHD9-208ENST00000563410 C9orf118A6NHY6 69 aa9.52□□□□□ -0.89
CHD9-208ENST00000563410 C5orf47Q569G3 176 aa9.52□□□□□ -0.89
CHD9-208ENST00000563410 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
CHD9-208ENST00000563410 MT1BP07438 61 aa9.5□□□□□ -0.89
CHD9-208ENST00000563410 CXCL6P80162 114 aa9.5□□□□□ -0.89
CHD9-208ENST00000563410 A0A1W2PPM0 123 aa9.49□□□□□ -0.89
CHD9-208ENST00000563410 TAX1BP3O14907 124 aa9.48□□□□□ -0.89
CHD9-208ENST00000563410 NEBP20929 6669 aa9.48□□□□□ -0.89
CHD9-208ENST00000563410 FAM236AA0A1B0GUQ0 79 aa9.47□□□□□ -0.89
CHD9-208ENST00000563410 FAM236BA0A1B0GV22 79 aa9.47□□□□□ -0.89
CHD9-208ENST00000563410 A6NN06 94 aa9.46□□□□□ -0.9
CHD9-208ENST00000563410 MUC12Q9UKN1 5478 aa9.45□□□□□ -0.9
CHD9-208ENST00000563410 S4R3F8 94 aa9.43□□□□□ -0.9
CHD9-208ENST00000563410 KRTAP19-8Q3LI54 63 aa9.42□□□□□ -0.9
CHD9-208ENST00000563410 Q5VV11 94 aa9.42□□□□□ -0.9
CHD9-208ENST00000563410 SPRR2GQ9BYE4 73 aa9.42□□□□□ -0.9
CHD9-208ENST00000563410 CSAG1Q6PB30 78 aa9.39□□□□□ -0.91
CHD9-208ENST00000563410 LCA10Q71F78 164 aa9.39□□□□□ -0.91
CHD9-208ENST00000563410 SMCPP49901 116 aaPredicted RBP9.37□□□□□ -0.91
CHD9-208ENST00000563410 C1orf64Q8NEQ6 169 aa9.37□□□□□ -0.91
CHD9-208ENST00000563410 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
CHD9-208ENST00000563410 UBL5Q9BZL1 73 aa9.32□□□□□ -0.92
CHD9-208ENST00000563410 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
CHD9-208ENST00000563410 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
CHD9-208ENST00000563410 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
CHD9-208ENST00000563410 PRO0461Q9UI25 63 aa9.24□□□□□ -0.93
CHD9-208ENST00000563410 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
CHD9-208ENST00000563410 KRTAP5-9P26371 169 aa9.2□□□□□ -0.94
CHD9-208ENST00000563410 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
CHD9-208ENST00000563410 KMT2DO14686 5537 aa9.17□□□□□ -0.94
CHD9-208ENST00000563410 MDN1Q9NU22 5596 aa9.16□□□□□ -0.94
CHD9-208ENST00000563410 KRTAP20-1Q3LI63 56 aa9.15□□□□□ -0.94
CHD9-208ENST00000563410 A0A087WVE0 104 aa9.14□□□□□ -0.95
CHD9-208ENST00000563410 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
CHD9-208ENST00000563410 K7EP34 96 aa9.11□□□□□ -0.95
CHD9-208ENST00000563410 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms