RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
CDH11-206ENST00000562998 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
CDH11-206ENST00000562998 J3KT08 172 aa9.74□□□□□ -0.85
CDH11-206ENST00000562998 A0A1B0GVX0 72 aa9.73□□□□□ -0.85
CDH11-206ENST00000562998 IGHV6-1A0A0B4J1U7 121 aa9.72□□□□□ -0.85
CDH11-206ENST00000562998 COL5A1-AS1Q5SY13 56 aa9.72□□□□□ -0.85
CDH11-206ENST00000562998 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
CDH11-206ENST00000562998 SPCS1Q9Y6A9 102 aa9.71□□□□□ -0.86
CDH11-206ENST00000562998 C8orf87E5RJ46 101 aa9.7□□□□□ -0.86
CDH11-206ENST00000562998 MT1HP80294 61 aa9.7□□□□□ -0.86
CDH11-206ENST00000562998 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
CDH11-206ENST00000562998 A8MWP4 228 aa9.64□□□□□ -0.87
CDH11-206ENST00000562998 PRO0461Q9UI25 63 aa9.63□□□□□ -0.87
CDH11-206ENST00000562998 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
CDH11-206ENST00000562998 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
CDH11-206ENST00000562998 NDUFB1O75438 58 aa9.61□□□□□ -0.87
CDH11-206ENST00000562998 NREPQ16612 68 aa9.61□□□□□ -0.87
CDH11-206ENST00000562998 K7EP34 96 aa9.6□□□□□ -0.87
CDH11-206ENST00000562998 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
CDH11-206ENST00000562998 C8orf17Q9NRJ1 99 aa9.58□□□□□ -0.88
CDH11-206ENST00000562998 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
CDH11-206ENST00000562998 PRR15Q8IV56 129 aa9.56□□□□□ -0.88
CDH11-206ENST00000562998 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
CDH11-206ENST00000562998 PCP4L1A6NKN8 68 aa9.55□□□□□ -0.88
CDH11-206ENST00000562998 ZCCHC13Q8WW36 166 aaKnown RBP9.51□□□□□ -0.89
CDH11-206ENST00000562998 LORP23490 312 aaPredicted RBP9.5□□□□□ -0.89
CDH11-206ENST00000562998 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
CDH11-206ENST00000562998 MMP24-AS1A0A0U1RRL7 71 aa9.49□□□□□ -0.89
CDH11-206ENST00000562998 Q6ZVQ6 151 aa9.49□□□□□ -0.89
CDH11-206ENST00000562998 K7EQZ3 153 aa9.48□□□□□ -0.89
CDH11-206ENST00000562998 HRES1P13985 223 aa9.48□□□□□ -0.89
CDH11-206ENST00000562998 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
CDH11-206ENST00000562998 GTF2H5Q6ZYL4 71 aa9.47□□□□□ -0.89
CDH11-206ENST00000562998 BPY2O14599 106 aa9.45□□□□□ -0.9
CDH11-206ENST00000562998 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
CDH11-206ENST00000562998 F8W1H4 67 aa9.43□□□□□ -0.9
CDH11-206ENST00000562998 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
CDH11-206ENST00000562998 M0R2T5 61 aa9.42□□□□□ -0.9
CDH11-206ENST00000562998 MRPL34Q9BQ48 92 aaKnown RBP9.42□□□□□ -0.9
CDH11-206ENST00000562998 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
CDH11-206ENST00000562998 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
CDH11-206ENST00000562998 SPINK7P58062 85 aa9.38□□□□□ -0.91
CDH11-206ENST00000562998 Q8N9L7 120 aa9.36□□□□□ -0.91
CDH11-206ENST00000562998 ETDBQ3ZM63 59 aa9.35□□□□□ -0.91
CDH11-206ENST00000562998 UBL5Q9BZL1 73 aa9.35□□□□□ -0.91
CDH11-206ENST00000562998 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
CDH11-206ENST00000562998 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
CDH11-206ENST00000562998 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
CDH11-206ENST00000562998 CASC2Q6XLA1 102 aa9.28□□□□□ -0.92
CDH11-206ENST00000562998 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
CDH11-206ENST00000562998 NDUFS5O43920 106 aa9.25□□□□□ -0.93
CDH11-206ENST00000562998 Q5W150 140 aa9.25□□□□□ -0.93
CDH11-206ENST00000562998 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
CDH11-206ENST00000562998 HCG22E2RYF7 251 aa9.21□□□□□ -0.94
CDH11-206ENST00000562998 CXCL6P80162 114 aa9.21□□□□□ -0.94
CDH11-206ENST00000562998 KRTAP9-6A0A140TA67 174 aa9.16□□□□□ -0.94
CDH11-206ENST00000562998 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
CDH11-206ENST00000562998 ACYP1P07311 99 aa9.14□□□□□ -0.95
CDH11-206ENST00000562998 C7orf65Q6ZTY9 151 aa9.12□□□□□ -0.95
CDH11-206ENST00000562998 IGKV2D-30A0A075B6S6 120 aa9.11□□□□□ -0.95
CDH11-206ENST00000562998 IGKV2-30P06310 120 aa9.11□□□□□ -0.95
CDH11-206ENST00000562998 MT2AP02795 61 aa9.1□□□□□ -0.95
CDH11-206ENST00000562998 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
CDH11-206ENST00000562998 A0A1B0GV90 55 aa9.09□□□□□ -0.95
CDH11-206ENST00000562998 CRCT1Q9UGL9 99 aa9.06□□□□□ -0.96
CDH11-206ENST00000562998 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
CDH11-206ENST00000562998 MT1FP04733 61 aa9.03□□□□□ -0.96
CDH11-206ENST00000562998 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
CDH11-206ENST00000562998 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
CDH11-206ENST00000562998 C4orf26Q17RF5 130 aa8.97□□□□□ -0.97
CDH11-206ENST00000562998 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
CDH11-206ENST00000562998 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
CDH11-206ENST00000562998 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
CDH11-206ENST00000562998 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
CDH11-206ENST00000562998 LINC00643Q86TS7 51 aa8.93□□□□□ -0.98
CDH11-206ENST00000562998 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
CDH11-206ENST00000562998 USH2AO75445 5202 aa8.92□□□□□ -0.98
CDH11-206ENST00000562998 HIST1H4AP62805 103 aaKnown RBP8.89□□□□□ -0.99
CDH11-206ENST00000562998 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
CDH11-206ENST00000562998 LCE2BO14633 110 aa8.85□□□□□ -0.99
CDH11-206ENST00000562998 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
CDH11-206ENST00000562998 A0A087WVE0 104 aa8.84□□□□□ -0.99
CDH11-206ENST00000562998 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
CDH11-206ENST00000562998 UQCRQO14949 82 aa8.81□□□□□ -1
CDH11-206ENST00000562998 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
CDH11-206ENST00000562998 SSPOA2VEC9 5147 aa8.8□□□□□ -1
CDH11-206ENST00000562998 J3QR89 54 aa8.77□□□□□ -1.01
CDH11-206ENST00000562998 H0Y9P7 68 aa8.73□□□□□ -1.01
CDH11-206ENST00000562998 ATOX1O00244 68 aa8.73□□□□□ -1.01
CDH11-206ENST00000562998 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
CDH11-206ENST00000562998 S4R3F8 94 aa8.72□□□□□ -1.01
CDH11-206ENST00000562998 LCA10Q71F78 164 aa8.71□□□□□ -1.02
CDH11-206ENST00000562998 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
CDH11-206ENST00000562998 CSAG1Q6PB30 78 aa8.64□□□□□ -1.03
CDH11-206ENST00000562998 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
CDH11-206ENST00000562998 KRTAP19-1Q8IUB9 90 aa8.6□□□□□ -1.03
CDH11-206ENST00000562998 KLKP1Q107X0 134 aa8.58□□□□□ -1.04
CDH11-206ENST00000562998 FCGBPQ9Y6R7 5405 aaPredicted RBP8.57□□□□□ -1.04
CDH11-206ENST00000562998 MP68P56378 58 aa8.56□□□□□ -1.04
CDH11-206ENST00000562998 IMUPQ9GZP8 106 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms