RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 H0Y9P7 68 aa5.73□□□□□ -1.49
SMG1-205ENST00000561947 PKHD1P08F94 4074 aa5.73□□□□□ -1.49
SMG1-205ENST00000561947 DYNC1H1Q14204 4646 aaKnown RBP5.72□□□□□ -1.49
SMG1-205ENST00000561947 A0A0A0MQY5 61 aa5.72□□□□□ -1.49
SMG1-205ENST00000561947 H3BPC8 53 aa5.72□□□□□ -1.49
SMG1-205ENST00000561947 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
SMG1-205ENST00000561947 LINC00208Q96KT6 92 aa5.72□□□□□ -1.49
SMG1-205ENST00000561947 SPINK6Q6UWN8 80 aa5.71□□□□□ -1.49
SMG1-205ENST00000561947 TRAV22A0A0B4J277 110 aa5.71□□□□□ -1.5
SMG1-205ENST00000561947 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
SMG1-205ENST00000561947 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
SMG1-205ENST00000561947 MRPL34Q9BQ48 92 aaKnown RBP5.7□□□□□ -1.5
SMG1-205ENST00000561947 RYR2Q92736 4967 aa5.69□□□□□ -1.5
SMG1-205ENST00000561947 A0A1B0GVY2 172 aa5.69□□□□□ -1.5
SMG1-205ENST00000561947 Q5XG85 94 aa5.69□□□□□ -1.5
SMG1-205ENST00000561947 H3BS24 57 aa5.68□□□□□ -1.5
SMG1-205ENST00000561947 C1orf64Q8NEQ6 169 aa5.67□□□□□ -1.5
SMG1-205ENST00000561947 NDUFS5O43920 106 aa5.67□□□□□ -1.5
SMG1-205ENST00000561947 APOBP04114 4563 aaKnown RBP5.66□□□□□ -1.5
SMG1-205ENST00000561947 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
SMG1-205ENST00000561947 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
SMG1-205ENST00000561947 SMIM26A0A096LP01 95 aa5.65□□□□□ -1.51
SMG1-205ENST00000561947 C1orf195Q5TG92 126 aa5.65□□□□□ -1.51
SMG1-205ENST00000561947 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.51
SMG1-205ENST00000561947 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
SMG1-205ENST00000561947 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
SMG1-205ENST00000561947 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
SMG1-205ENST00000561947 PRR4Q16378 134 aa5.62□□□□□ -1.51
SMG1-205ENST00000561947 SMR3BP02814 79 aaPredicted RBP5.61□□□□□ -1.51
SMG1-205ENST00000561947 FP248Q71RG6 208 aaPredicted RBP5.61□□□□□ -1.51
SMG1-205ENST00000561947 LINC00313P59037 77 aa5.61□□□□□ -1.51
SMG1-205ENST00000561947 C4orf26Q17RF5 130 aa5.6□□□□□ -1.51
SMG1-205ENST00000561947 SPINK1P00995 79 aa5.6□□□□□ -1.51
SMG1-205ENST00000561947 KMT2CQ8NEZ4 4911 aaKnown RBP5.59□□□□□ -1.52
SMG1-205ENST00000561947 PRR26Q8N8Z3 221 aa5.59□□□□□ -1.52
SMG1-205ENST00000561947 FAT1Q14517 4588 aa5.58□□□□□ -1.52
SMG1-205ENST00000561947 KRTAP13-3Q3SY46 172 aa5.58□□□□□ -1.52
SMG1-205ENST00000561947 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
SMG1-205ENST00000561947 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
SMG1-205ENST00000561947 Q5W150 140 aa5.57□□□□□ -1.52
SMG1-205ENST00000561947 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
SMG1-205ENST00000561947 LINC00304Q8N9R0 145 aa5.57□□□□□ -1.52
SMG1-205ENST00000561947 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
SMG1-205ENST00000561947 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
SMG1-205ENST00000561947 LOC101927531A0A1B0GV80 90 aa5.56□□□□□ -1.52
SMG1-205ENST00000561947 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
SMG1-205ENST00000561947 KRTAP16-1A8MUX0 517 aa5.55□□□□□ -1.52
SMG1-205ENST00000561947 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
SMG1-205ENST00000561947 V9GYY9 64 aa5.53□□□□□ -1.52
SMG1-205ENST00000561947 FAM229AH3BQW9 127 aa5.53□□□□□ -1.52
SMG1-205ENST00000561947 MPLKIPQ8TAP9 179 aa5.53□□□□□ -1.52
SMG1-205ENST00000561947 RETNLBQ9BQ08 111 aa5.49□□□□□ -1.53
SMG1-205ENST00000561947 Q1T7F1 81 aa5.49□□□□□ -1.53
SMG1-205ENST00000561947 COA5Q86WW8 74 aa5.49□□□□□ -1.53
SMG1-205ENST00000561947 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
SMG1-205ENST00000561947 RYR3Q15413 4870 aa5.46□□□□□ -1.54
SMG1-205ENST00000561947 HSPG2P98160 4391 aa5.44□□□□□ -1.54
SMG1-205ENST00000561947 HRES1P13985 223 aa5.43□□□□□ -1.54
SMG1-205ENST00000561947 RYR1P21817 5038 aa5.42□□□□□ -1.54
SMG1-205ENST00000561947 TNXBP22105 4242 aa5.41□□□□□ -1.54
SMG1-205ENST00000561947 IGKV2D-30A0A075B6S6 120 aa5.4□□□□□ -1.54
SMG1-205ENST00000561947 Q5VSD8 79 aa5.4□□□□□ -1.54
SMG1-205ENST00000561947 PSPHP1O15172 72 aa5.39□□□□□ -1.55
SMG1-205ENST00000561947 DMAC1Q96GE9 116 aa5.39□□□□□ -1.55
SMG1-205ENST00000561947 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
SMG1-205ENST00000561947 ACYP2P14621 99 aa5.38□□□□□ -1.55
SMG1-205ENST00000561947 FAT3Q8TDW7 4589 aa5.37□□□□□ -1.55
SMG1-205ENST00000561947 A8MUN3 132 aa5.37□□□□□ -1.55
SMG1-205ENST00000561947 A8MUU9 505 aa5.37□□□□□ -1.55
SMG1-205ENST00000561947 C20orf166-AS1Q96NR2 134 aa5.37□□□□□ -1.55
SMG1-205ENST00000561947 Q8N1X5 172 aa5.36□□□□□ -1.55
SMG1-205ENST00000561947 LRP1Q07954 4544 aaKnown RBP5.36□□□□□ -1.55
SMG1-205ENST00000561947 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
SMG1-205ENST00000561947 FLG2Q5D862 2391 aaPredicted RBP5.35□□□□□ -1.55
SMG1-205ENST00000561947 C7orf65Q6ZTY9 151 aa5.35□□□□□ -1.55
SMG1-205ENST00000561947 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
SMG1-205ENST00000561947 Q5VV11 94 aa5.34□□□□□ -1.55
SMG1-205ENST00000561947 PRR15LQ9BU68 103 aa5.34□□□□□ -1.55
SMG1-205ENST00000561947 PRO0628Q9UI54 55 aa5.33□□□□□ -1.56
SMG1-205ENST00000561947 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
SMG1-205ENST00000561947 CHKB-CPT1BH3BT56 60 aa5.31□□□□□ -1.56
SMG1-205ENST00000561947 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
SMG1-205ENST00000561947 Q75L30 129 aa5.29□□□□□ -1.56
SMG1-205ENST00000561947 KIAA1109Q2LD37 5005 aa5.28□□□□□ -1.56
SMG1-205ENST00000561947 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
SMG1-205ENST00000561947 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
SMG1-205ENST00000561947 EPPK1P58107 5090 aaKnown RBP5.25□□□□□ -1.57
SMG1-205ENST00000561947 MT1HL1P0DM35 61 aa5.23□□□□□ -1.57
SMG1-205ENST00000561947 SPINK7P58062 85 aa5.23□□□□□ -1.57
SMG1-205ENST00000561947 A6NED7 52 aa5.21□□□□□ -1.57
SMG1-205ENST00000561947 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
SMG1-205ENST00000561947 DMBT1Q9UGM3 2413 aaPredicted RBP5.19□□□□□ -1.58
SMG1-205ENST00000561947 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
SMG1-205ENST00000561947 ATP11AUNQ6ZP68 121 aa5.19□□□□□ -1.58
SMG1-205ENST00000561947 A8MU10 97 aa5.18□□□□□ -1.58
SMG1-205ENST00000561947 XP32Q5T750 250 aa5.18□□□□□ -1.58
SMG1-205ENST00000561947 A0A1B0GU69 56 aa5.17□□□□□ -1.58
SMG1-205ENST00000561947 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
SMG1-205ENST00000561947 LCA10Q71F78 164 aa5.17□□□□□ -1.58
SMG1-205ENST00000561947 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms