RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 SPANXA2-OT1Q8N9U9 137 aa9.67□□□□□ -0.86
MEIS3-209ENST00000561040 TRAV22A0A0B4J277 110 aa9.66□□□□□ -0.86
MEIS3-209ENST00000561040 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
MEIS3-209ENST00000561040 CDK2AP2O75956 126 aa9.64□□□□□ -0.87
MEIS3-209ENST00000561040 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
MEIS3-209ENST00000561040 LIMD2Q9BT23 127 aa9.64□□□□□ -0.87
MEIS3-209ENST00000561040 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
MEIS3-209ENST00000561040 WFDC13Q8IUB5 93 aa9.63□□□□□ -0.87
MEIS3-209ENST00000561040 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
MEIS3-209ENST00000561040 A0A087X002 238 aa9.61□□□□□ -0.87
MEIS3-209ENST00000561040 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
MEIS3-209ENST00000561040 KRTAP13-2Q52LG2 175 aa9.6□□□□□ -0.87
MEIS3-209ENST00000561040 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.87
MEIS3-209ENST00000561040 MMP24-AS1A0A0U1RRL7 71 aa9.59□□□□□ -0.87
MEIS3-209ENST00000561040 A0A1B0GVX0 72 aa9.59□□□□□ -0.88
MEIS3-209ENST00000561040 RYR2Q92736 4967 aa9.58□□□□□ -0.88
MEIS3-209ENST00000561040 PSPHP1O15172 72 aa9.57□□□□□ -0.88
MEIS3-209ENST00000561040 KMT2CQ8NEZ4 4911 aaKnown RBP9.56□□□□□ -0.88
MEIS3-209ENST00000561040 PLA2G1BP04054 148 aaKnown RBP9.56□□□□□ -0.88
MEIS3-209ENST00000561040 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
MEIS3-209ENST00000561040 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
MEIS3-209ENST00000561040 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
MEIS3-209ENST00000561040 A8MUN3 132 aa9.52□□□□□ -0.89
MEIS3-209ENST00000561040 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
MEIS3-209ENST00000561040 Q5VV11 94 aa9.51□□□□□ -0.89
MEIS3-209ENST00000561040 TYMSOSQ8TAI1 123 aa9.51□□□□□ -0.89
MEIS3-209ENST00000561040 TP53AIP1Q9HCN2 124 aa9.51□□□□□ -0.89
MEIS3-209ENST00000561040 DYNC1H1Q14204 4646 aaKnown RBP9.5□□□□□ -0.89
MEIS3-209ENST00000561040 NDUFS5O43920 106 aa9.49□□□□□ -0.89
MEIS3-209ENST00000561040 ATP11AUNQ6ZP68 121 aa9.49□□□□□ -0.89
MEIS3-209ENST00000561040 C8orf87E5RJ46 101 aa9.48□□□□□ -0.89
MEIS3-209ENST00000561040 SMR3BP02814 79 aaPredicted RBP9.48□□□□□ -0.89
MEIS3-209ENST00000561040 Q8N9P0 234 aaPredicted RBP9.48□□□□□ -0.89
MEIS3-209ENST00000561040 PKHD1P08F94 4074 aa9.48□□□□□ -0.89
MEIS3-209ENST00000561040 RYR3Q15413 4870 aa9.48□□□□□ -0.89
MEIS3-209ENST00000561040 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
MEIS3-209ENST00000561040 SPINK1P00995 79 aa9.47□□□□□ -0.89
MEIS3-209ENST00000561040 KTN1-AS1Q86SY8 53 aa9.47□□□□□ -0.89
MEIS3-209ENST00000561040 H0Y9P7 68 aa9.47□□□□□ -0.89
MEIS3-209ENST00000561040 Q75L30 129 aa9.47□□□□□ -0.89
MEIS3-209ENST00000561040 CHKB-CPT1BH3BT56 60 aa9.46□□□□□ -0.9
MEIS3-209ENST00000561040 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.9
MEIS3-209ENST00000561040 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
MEIS3-209ENST00000561040 RPS29P62273 56 aaKnown RBP9.45□□□□□ -0.9
MEIS3-209ENST00000561040 SPAG11AQ6PDA7 123 aa9.45□□□□□ -0.9
MEIS3-209ENST00000561040 PRR4Q16378 134 aa9.43□□□□□ -0.9
MEIS3-209ENST00000561040 KRTAP10-4P60372 401 aaPredicted RBP9.42□□□□□ -0.9
MEIS3-209ENST00000561040 PRR15LQ9BU68 103 aa9.41□□□□□ -0.9
MEIS3-209ENST00000561040 LINC00304Q8N9R0 145 aa9.4□□□□□ -0.91
MEIS3-209ENST00000561040 PRR26Q8N8Z3 221 aa9.39□□□□□ -0.91
MEIS3-209ENST00000561040 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
MEIS3-209ENST00000561040 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
MEIS3-209ENST00000561040 FAM229AH3BQW9 127 aa9.37□□□□□ -0.91
MEIS3-209ENST00000561040 LINC00313P59037 77 aa9.37□□□□□ -0.91
MEIS3-209ENST00000561040 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
MEIS3-209ENST00000561040 CDC42SE1Q9NRR8 79 aa9.36□□□□□ -0.91
MEIS3-209ENST00000561040 A6NED7 52 aa9.34□□□□□ -0.91
MEIS3-209ENST00000561040 COA5Q86WW8 74 aa9.33□□□□□ -0.92
MEIS3-209ENST00000561040 LINC01558Q9Y6Z2 57 aa9.32□□□□□ -0.92
MEIS3-209ENST00000561040 A6NN06 94 aa9.28□□□□□ -0.92
MEIS3-209ENST00000561040 SPTSSBQ8NFR3 76 aa9.28□□□□□ -0.92
MEIS3-209ENST00000561040 RBM12B-AS1Q9P1G2 102 aa9.27□□□□□ -0.93
MEIS3-209ENST00000561040 C7orf65Q6ZTY9 151 aa9.26□□□□□ -0.93
MEIS3-209ENST00000561040 LCA10Q71F78 164 aa9.26□□□□□ -0.93
MEIS3-209ENST00000561040 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
MEIS3-209ENST00000561040 Q5VSD8 79 aa9.22□□□□□ -0.93
MEIS3-209ENST00000561040 FAT1Q14517 4588 aa9.21□□□□□ -0.94
MEIS3-209ENST00000561040 PKHD1L1Q86WI1 4243 aa9.2□□□□□ -0.94
MEIS3-209ENST00000561040 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
MEIS3-209ENST00000561040 A8MU10 97 aa9.19□□□□□ -0.94
MEIS3-209ENST00000561040 Q5W150 140 aa9.17□□□□□ -0.94
MEIS3-209ENST00000561040 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
MEIS3-209ENST00000561040 EPPK1P58107 5090 aaKnown RBP9.17□□□□□ -0.94
MEIS3-209ENST00000561040 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
MEIS3-209ENST00000561040 RYR1P21817 5038 aa9.11□□□□□ -0.95
MEIS3-209ENST00000561040 KRTAP10-8P60410 259 aa9.1□□□□□ -0.95
MEIS3-209ENST00000561040 HRES1P13985 223 aa9.07□□□□□ -0.96
MEIS3-209ENST00000561040 HSPG2P98160 4391 aa9.06□□□□□ -0.96
MEIS3-209ENST00000561040 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
MEIS3-209ENST00000561040 Q8N1X5 172 aa9.06□□□□□ -0.96
MEIS3-209ENST00000561040 RETNLBQ9BQ08 111 aa9.03□□□□□ -0.96
MEIS3-209ENST00000561040 SPINK7P58062 85 aa9.01□□□□□ -0.97
MEIS3-209ENST00000561040 C20orf166-AS1Q96NR2 134 aa9.01□□□□□ -0.97
MEIS3-209ENST00000561040 A8MUU9 505 aa9□□□□□ -0.97
MEIS3-209ENST00000561040 ACYP2P14621 99 aa9□□□□□ -0.97
MEIS3-209ENST00000561040 FLG2Q5D862 2391 aaPredicted RBP8.98□□□□□ -0.97
MEIS3-209ENST00000561040 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
MEIS3-209ENST00000561040 IGKV2D-30A0A075B6S6 120 aa8.94□□□□□ -0.98
MEIS3-209ENST00000561040 KIAA1109Q2LD37 5005 aa8.92□□□□□ -0.98
MEIS3-209ENST00000561040 KRTAP17-1Q9BYP8 105 aa8.92□□□□□ -0.98
MEIS3-209ENST00000561040 DMAC1Q96GE9 116 aa8.91□□□□□ -0.98
MEIS3-209ENST00000561040 TNXBP22105 4242 aa8.9□□□□□ -0.98
MEIS3-209ENST00000561040 MT1HL1P0DM35 61 aa8.87□□□□□ -0.99
MEIS3-209ENST00000561040 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
MEIS3-209ENST00000561040 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
MEIS3-209ENST00000561040 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
MEIS3-209ENST00000561040 A0A1B0GU69 56 aa8.84□□□□□ -0.99
MEIS3-209ENST00000561040 LINC01554Q52M75 96 aa8.81□□□□□ -1
MEIS3-209ENST00000561040 UQCR11O14957 56 aa8.8□□□□□ -1
MEIS3-209ENST00000561040 HERC2O95714 4834 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms