RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
AP4E1-203ENST00000560508 A6NN06 94 aa3.82□□□□□ -1.8
AP4E1-203ENST00000560508 TACC2O95359 2948 aa3.81□□□□□ -1.8
AP4E1-203ENST00000560508 ITPR2Q14571 2701 aa3.81□□□□□ -1.8
AP4E1-203ENST00000560508 UTP20O75691 2785 aaKnown RBP3.81□□□□□ -1.8
AP4E1-203ENST00000560508 LAMA5O15230 3695 aa3.8□□□□□ -1.8
AP4E1-203ENST00000560508 ASH1LQ9NR48 2969 aaKnown RBP3.8□□□□□ -1.8
AP4E1-203ENST00000560508 ADGRG4Q8IZF6 3080 aa3.8□□□□□ -1.8
AP4E1-203ENST00000560508 MAST4O15021 2626 aa3.8□□□□□ -1.8
AP4E1-203ENST00000560508 SETXQ7Z333 2677 aaKnown RBP3.8□□□□□ -1.8
AP4E1-203ENST00000560508 GCN1Q92616 2671 aaKnown RBP3.79□□□□□ -1.8
AP4E1-203ENST00000560508 ATMQ13315 3056 aa3.79□□□□□ -1.8
AP4E1-203ENST00000560508 RELNP78509 3460 aa3.78□□□□□ -1.8
AP4E1-203ENST00000560508 STAB1Q9NY15 2570 aa3.78□□□□□ -1.8
AP4E1-203ENST00000560508 KRTAP1-4P0C5Y4 121 aa3.78□□□□□ -1.8
AP4E1-203ENST00000560508 HRNRQ86YZ3 2850 aaPredicted RBP3.78□□□□□ -1.8
AP4E1-203ENST00000560508 A8MU10 97 aa3.77□□□□□ -1.81
AP4E1-203ENST00000560508 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
AP4E1-203ENST00000560508 CENPEQ02224 2701 aa3.75□□□□□ -1.81
AP4E1-203ENST00000560508 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
AP4E1-203ENST00000560508 UNC79Q9P2D8 2635 aa3.73□□□□□ -1.81
AP4E1-203ENST00000560508 BAHCC1Q9P281 2608 aa3.71□□□□□ -1.82
AP4E1-203ENST00000560508 XP32Q5T750 250 aa3.71□□□□□ -1.82
AP4E1-203ENST00000560508 NBEAL2Q6ZNJ1 2754 aa3.71□□□□□ -1.82
AP4E1-203ENST00000560508 UBR5O95071 2799 aaPredicted RBP3.71□□□□□ -1.82
AP4E1-203ENST00000560508 CELSR2Q9HCU4 2923 aa3.69□□□□□ -1.82
AP4E1-203ENST00000560508 APCP25054 2843 aa3.68□□□□□ -1.82
AP4E1-203ENST00000560508 ITPR1Q14643 2758 aa3.68□□□□□ -1.82
AP4E1-203ENST00000560508 CSMD1Q96PZ7 3565 aa3.68□□□□□ -1.82
AP4E1-203ENST00000560508 MAP1AP78559 2803 aaPredicted RBP3.68□□□□□ -1.82
AP4E1-203ENST00000560508 SVEP1Q4LDE5 3571 aa3.67□□□□□ -1.82
AP4E1-203ENST00000560508 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
AP4E1-203ENST00000560508 CELSR1Q9NYQ6 3014 aa3.66□□□□□ -1.82
AP4E1-203ENST00000560508 COL12A1Q99715 3063 aa3.66□□□□□ -1.82
AP4E1-203ENST00000560508 A0A1B0GVY2 172 aa3.64□□□□□ -1.83
AP4E1-203ENST00000560508 ZFHX3Q15911 3703 aa3.63□□□□□ -1.83
AP4E1-203ENST00000560508 COL6A5A8TX70 2615 aa3.63□□□□□ -1.83
AP4E1-203ENST00000560508 ANK3Q12955 4377 aaKnown RBP3.63□□□□□ -1.83
AP4E1-203ENST00000560508 TNP1P09430 55 aa3.62□□□□□ -1.83
AP4E1-203ENST00000560508 NBEAL1Q6ZS30 2694 aa3.62□□□□□ -1.83
AP4E1-203ENST00000560508 NSD1Q96L73 2696 aaPredicted RBP3.61□□□□□ -1.83
AP4E1-203ENST00000560508 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
AP4E1-203ENST00000560508 FLNCQ14315 2725 aa3.61□□□□□ -1.83
AP4E1-203ENST00000560508 H0YAA0 97 aa3.61□□□□□ -1.83
AP4E1-203ENST00000560508 HIVEP1P15822 2718 aa3.6□□□□□ -1.83
AP4E1-203ENST00000560508 VPS13CQ709C8 3753 aa3.59□□□□□ -1.83
AP4E1-203ENST00000560508 CRYBG3Q68DQ2 2970 aa3.59□□□□□ -1.83
AP4E1-203ENST00000560508 NBPF19A0A087WUL8 3843 aa3.59□□□□□ -1.83
AP4E1-203ENST00000560508 NIPBLQ6KC79 2804 aaeCLIP3.57□□□□□ -1.84
AP4E1-203ENST00000560508 MXRA5Q9NR99 2828 aa3.56□□□□□ -1.84
AP4E1-203ENST00000560508 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
AP4E1-203ENST00000560508 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
AP4E1-203ENST00000560508 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
AP4E1-203ENST00000560508 FBN2P35556 2912 aa3.54□□□□□ -1.84
AP4E1-203ENST00000560508 NOTCH1P46531 2555 aa3.54□□□□□ -1.84
AP4E1-203ENST00000560508 PDZD2O15018 2839 aa3.52□□□□□ -1.85
AP4E1-203ENST00000560508 AKAP9Q99996 3911 aa3.52□□□□□ -1.85
AP4E1-203ENST00000560508 ZANQ9Y493 2812 aa3.5□□□□□ -1.85
AP4E1-203ENST00000560508 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
AP4E1-203ENST00000560508 DMBT1Q9UGM3 2413 aaPredicted RBP3.49□□□□□ -1.85
AP4E1-203ENST00000560508 P0C880 135 aa3.48□□□□□ -1.85
AP4E1-203ENST00000560508 ALMS1Q8TCU4 4167 aa3.46□□□□□ -1.85
AP4E1-203ENST00000560508 CSMD2Q7Z408 3487 aa3.46□□□□□ -1.86
AP4E1-203ENST00000560508 TENM4Q6N022 2769 aa3.45□□□□□ -1.86
AP4E1-203ENST00000560508 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
AP4E1-203ENST00000560508 HUWE1Q7Z6Z7 4374 aaKnown RBP3.45□□□□□ -1.86
AP4E1-203ENST00000560508 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
AP4E1-203ENST00000560508 STAB2Q8WWQ8 2551 aa3.43□□□□□ -1.86
AP4E1-203ENST00000560508 NF1P21359 2839 aa3.42□□□□□ -1.86
AP4E1-203ENST00000560508 FLG2Q5D862 2391 aaPredicted RBP3.42□□□□□ -1.86
AP4E1-203ENST00000560508 KRTAP12-2P59991 146 aa3.4□□□□□ -1.86
AP4E1-203ENST00000560508 ZNF469Q96JG9 3925 aaPredicted RBP3.39□□□□□ -1.87
AP4E1-203ENST00000560508 KRTAP3-1Q9BYR8 98 aa3.38□□□□□ -1.87
AP4E1-203ENST00000560508 VWFP04275 2813 aa3.35□□□□□ -1.87
AP4E1-203ENST00000560508 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
AP4E1-203ENST00000560508 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
AP4E1-203ENST00000560508 CUBNO60494 3623 aa3.33□□□□□ -1.88
AP4E1-203ENST00000560508 OTOGQ6ZRI0 2925 aa3.31□□□□□ -1.88
AP4E1-203ENST00000560508 TENM3Q9P273 2699 aa3.3□□□□□ -1.88
AP4E1-203ENST00000560508 TRRAPQ9Y4A5 3859 aa3.28□□□□□ -1.88
AP4E1-203ENST00000560508 DNAH3Q8TD57 4116 aa3.27□□□□□ -1.89
AP4E1-203ENST00000560508 TENM2Q9NT68 2774 aa3.27□□□□□ -1.89
AP4E1-203ENST00000560508 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
AP4E1-203ENST00000560508 TGP01266 2768 aa3.27□□□□□ -1.89
AP4E1-203ENST00000560508 MT1HL1P0DM35 61 aa3.26□□□□□ -1.89
AP4E1-203ENST00000560508 KRTAP10-4P60372 401 aaPredicted RBP3.25□□□□□ -1.89
AP4E1-203ENST00000560508 TENM1Q9UKZ4 2725 aa3.25□□□□□ -1.89
AP4E1-203ENST00000560508 FBN1P35555 2871 aaKnown RBP3.24□□□□□ -1.89
AP4E1-203ENST00000560508 DNAH9Q9NYC9 4486 aa3.23□□□□□ -1.89
AP4E1-203ENST00000560508 PKD1L1Q8TDX9 2849 aa3.21□□□□□ -1.9
AP4E1-203ENST00000560508 KRTAP3-3Q9BYR6 98 aa3.2□□□□□ -1.9
AP4E1-203ENST00000560508 ANK2Q01484 3957 aa3.18□□□□□ -1.9
AP4E1-203ENST00000560508 KRTAP3-2Q9BYR7 98 aa3.18□□□□□ -1.9
AP4E1-203ENST00000560508 CMYA5Q8N3K9 4069 aa3.18□□□□□ -1.9
AP4E1-203ENST00000560508 DNAH1Q9P2D7 4330 aa3.16□□□□□ -1.9
AP4E1-203ENST00000560508 DNAH6Q9C0G6 4158 aa3.16□□□□□ -1.9
AP4E1-203ENST00000560508 LYSTQ99698 3801 aa3.16□□□□□ -1.9
AP4E1-203ENST00000560508 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
AP4E1-203ENST00000560508 KRTAP4-5Q9BYR2 181 aa3.12□□□□□ -1.91
AP4E1-203ENST00000560508 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms