RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 OXTP01178 125 aa8□□□□□ -1.13
TRAF3-208ENST00000560371 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
TRAF3-208ENST00000560371 CELSR1Q9NYQ6 3014 aa8□□□□□ -1.13
TRAF3-208ENST00000560371 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
TRAF3-208ENST00000560371 M0QZ58 72 aa7.98□□□□□ -1.13
TRAF3-208ENST00000560371 PANO1I0J062 215 aa7.98□□□□□ -1.13
TRAF3-208ENST00000560371 H3BS24 57 aa7.97□□□□□ -1.13
TRAF3-208ENST00000560371 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
TRAF3-208ENST00000560371 Q75L30 129 aa7.94□□□□□ -1.14
TRAF3-208ENST00000560371 A0A087X002 238 aa7.94□□□□□ -1.14
TRAF3-208ENST00000560371 WDFY3Q8IZQ1 3526 aa7.92□□□□□ -1.14
TRAF3-208ENST00000560371 LINC01558Q9Y6Z2 57 aa7.9□□□□□ -1.14
TRAF3-208ENST00000560371 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.15
TRAF3-208ENST00000560371 HRNRQ86YZ3 2850 aaPredicted RBP7.87□□□□□ -1.15
TRAF3-208ENST00000560371 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
TRAF3-208ENST00000560371 ROMO1P60602 79 aa7.84□□□□□ -1.15
TRAF3-208ENST00000560371 DCHS1Q96JQ0 3298 aa7.84□□□□□ -1.15
TRAF3-208ENST00000560371 RPL37P61927 97 aaKnown RBP7.82□□□□□ -1.16
TRAF3-208ENST00000560371 KRTAP21-3Q3LHN1 58 aa7.82□□□□□ -1.16
TRAF3-208ENST00000560371 VWFP04275 2813 aa7.81□□□□□ -1.16
TRAF3-208ENST00000560371 Q6ZRN7 208 aaPredicted RBP7.8□□□□□ -1.16
TRAF3-208ENST00000560371 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
TRAF3-208ENST00000560371 MXRA5Q9NR99 2828 aa7.77□□□□□ -1.17
TRAF3-208ENST00000560371 CYSTM1Q9H1C7 97 aa7.77□□□□□ -1.17
TRAF3-208ENST00000560371 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
TRAF3-208ENST00000560371 ASPMQ8IZT6 3477 aa7.75□□□□□ -1.17
TRAF3-208ENST00000560371 RPS29P62273 56 aaKnown RBP7.74□□□□□ -1.17
TRAF3-208ENST00000560371 Q5VV11 94 aa7.74□□□□□ -1.17
TRAF3-208ENST00000560371 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
TRAF3-208ENST00000560371 ASB16-AS1Q495Z4 193 aa7.73□□□□□ -1.17
TRAF3-208ENST00000560371 NBPF19A0A087WUL8 3843 aa7.72□□□□□ -1.17
TRAF3-208ENST00000560371 RELNP78509 3460 aa7.72□□□□□ -1.17
TRAF3-208ENST00000560371 PDZD2O15018 2839 aa7.71□□□□□ -1.18
TRAF3-208ENST00000560371 KRTAP29-1A8MX34 341 aaPredicted RBP7.69□□□□□ -1.18
TRAF3-208ENST00000560371 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
TRAF3-208ENST00000560371 LAMA5O15230 3695 aa7.65□□□□□ -1.18
TRAF3-208ENST00000560371 ZFHX3Q15911 3703 aa7.64□□□□□ -1.19
TRAF3-208ENST00000560371 TENM2Q9NT68 2774 aa7.64□□□□□ -1.19
TRAF3-208ENST00000560371 Q5XG85 94 aa7.63□□□□□ -1.19
TRAF3-208ENST00000560371 TGP01266 2768 aa7.62□□□□□ -1.19
TRAF3-208ENST00000560371 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
TRAF3-208ENST00000560371 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
TRAF3-208ENST00000560371 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
TRAF3-208ENST00000560371 A8MUU9 505 aa7.58□□□□□ -1.2
TRAF3-208ENST00000560371 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
TRAF3-208ENST00000560371 KRTAP13-1Q8IUC0 172 aa7.56□□□□□ -1.2
TRAF3-208ENST00000560371 ZFHX4Q86UP3 3567 aa7.5□□□□□ -1.21
TRAF3-208ENST00000560371 FBN1P35555 2871 aaKnown RBP7.5□□□□□ -1.21
TRAF3-208ENST00000560371 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
TRAF3-208ENST00000560371 A8MU10 97 aa7.44□□□□□ -1.22
TRAF3-208ENST00000560371 MUC3AQ02505 3323 aa7.43□□□□□ -1.22
TRAF3-208ENST00000560371 TNP1P09430 55 aa7.38□□□□□ -1.23
TRAF3-208ENST00000560371 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
TRAF3-208ENST00000560371 COL7A1Q02388 2944 aa7.34□□□□□ -1.23
TRAF3-208ENST00000560371 DMDP11532 3685 aa7.34□□□□□ -1.23
TRAF3-208ENST00000560371 CSMD1Q96PZ7 3565 aa7.34□□□□□ -1.24
TRAF3-208ENST00000560371 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
TRAF3-208ENST00000560371 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
TRAF3-208ENST00000560371 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
TRAF3-208ENST00000560371 XP32Q5T750 250 aa7.26□□□□□ -1.25
TRAF3-208ENST00000560371 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
TRAF3-208ENST00000560371 CUBNO60494 3623 aa7.25□□□□□ -1.25
TRAF3-208ENST00000560371 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
TRAF3-208ENST00000560371 OTOGQ6ZRI0 2925 aa7.2□□□□□ -1.26
TRAF3-208ENST00000560371 P0C880 135 aa7.19□□□□□ -1.26
TRAF3-208ENST00000560371 SMG1Q96Q15 3661 aaKnown RBP7.18□□□□□ -1.26
TRAF3-208ENST00000560371 SPENQ96T58 3664 aaKnown RBP7.16□□□□□ -1.26
TRAF3-208ENST00000560371 FBN3Q75N90 2809 aa7.13□□□□□ -1.27
TRAF3-208ENST00000560371 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
TRAF3-208ENST00000560371 SVEP1Q4LDE5 3571 aa7.1□□□□□ -1.27
TRAF3-208ENST00000560371 MEGF8Q7Z7M0 2845 aa7.09□□□□□ -1.28
TRAF3-208ENST00000560371 A6NN06 94 aa7.08□□□□□ -1.28
TRAF3-208ENST00000560371 CSMD2Q7Z408 3487 aa7.07□□□□□ -1.28
TRAF3-208ENST00000560371 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.28
TRAF3-208ENST00000560371 TRRAPQ9Y4A5 3859 aa7.02□□□□□ -1.29
TRAF3-208ENST00000560371 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
TRAF3-208ENST00000560371 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
TRAF3-208ENST00000560371 H0YAA0 97 aa6.87□□□□□ -1.31
TRAF3-208ENST00000560371 BSNQ9UPA5 3926 aa6.75□□□□□ -1.33
TRAF3-208ENST00000560371 VPS13CQ709C8 3753 aa6.71□□□□□ -1.33
TRAF3-208ENST00000560371 CSMD3Q7Z407 3707 aa6.52□□□□□ -1.37
TRAF3-208ENST00000560371 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
TRAF3-208ENST00000560371 ANK3Q12955 4377 aaKnown RBP6.51□□□□□ -1.37
TRAF3-208ENST00000560371 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
TRAF3-208ENST00000560371 ZNF469Q96JG9 3925 aaPredicted RBP6.42□□□□□ -1.38
TRAF3-208ENST00000560371 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
TRAF3-208ENST00000560371 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
TRAF3-208ENST00000560371 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
TRAF3-208ENST00000560371 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
TRAF3-208ENST00000560371 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
TRAF3-208ENST00000560371 AKAP9Q99996 3911 aa6.19□□□□□ -1.42
TRAF3-208ENST00000560371 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
TRAF3-208ENST00000560371 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
TRAF3-208ENST00000560371 KRTAP10-6P60371 365 aaPredicted RBP6.18□□□□□ -1.42
TRAF3-208ENST00000560371 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
TRAF3-208ENST00000560371 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
TRAF3-208ENST00000560371 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
TRAF3-208ENST00000560371 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
TRAF3-208ENST00000560371 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
TRAF3-208ENST00000560371 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms