RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
HMBOX1-214ENST00000560357 SPINK1P00995 79 aa4.16□□□□□ -1.74
HMBOX1-214ENST00000560357 OXTP01178 125 aa4.16□□□□□ -1.74
HMBOX1-214ENST00000560357 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
HMBOX1-214ENST00000560357 Q5XG85 94 aa4.16□□□□□ -1.74
HMBOX1-214ENST00000560357 SS18L2Q9UHA2 77 aa4.16□□□□□ -1.74
HMBOX1-214ENST00000560357 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
HMBOX1-214ENST00000560357 LINC00643Q86TS7 51 aa4.15□□□□□ -1.75
HMBOX1-214ENST00000560357 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.75
HMBOX1-214ENST00000560357 LINC00472Q9H8W2 130 aa4.15□□□□□ -1.75
HMBOX1-214ENST00000560357 FAT3Q8TDW7 4589 aa4.14□□□□□ -1.75
HMBOX1-214ENST00000560357 HERC2O95714 4834 aa4.14□□□□□ -1.75
HMBOX1-214ENST00000560357 KRTAP29-1A8MX34 341 aaPredicted RBP4.14□□□□□ -1.75
HMBOX1-214ENST00000560357 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
HMBOX1-214ENST00000560357 ASB16-AS1Q495Z4 193 aa4.14□□□□□ -1.75
HMBOX1-214ENST00000560357 Q96NJ1 140 aa4.14□□□□□ -1.75
HMBOX1-214ENST00000560357 TNXBP22105 4242 aa4.14□□□□□ -1.75
HMBOX1-214ENST00000560357 DEFB116Q30KQ4 102 aa4.13□□□□□ -1.75
HMBOX1-214ENST00000560357 LIMD2Q9BT23 127 aa4.13□□□□□ -1.75
HMBOX1-214ENST00000560357 IGKV3D-7A0A0C4DH55 119 aa4.12□□□□□ -1.75
HMBOX1-214ENST00000560357 BPY2O14599 106 aa4.12□□□□□ -1.75
HMBOX1-214ENST00000560357 CXCL6P80162 114 aa4.12□□□□□ -1.75
HMBOX1-214ENST00000560357 C1orf195Q5TG92 126 aa4.12□□□□□ -1.75
HMBOX1-214ENST00000560357 SIGMAR1Q99720 223 aa4.12□□□□□ -1.75
HMBOX1-214ENST00000560357 DMBT1Q9UGM3 2413 aaPredicted RBP4.12□□□□□ -1.75
HMBOX1-214ENST00000560357 MT-ATP8P03928 68 aa4.11□□□□□ -1.75
HMBOX1-214ENST00000560357 DSCR10P59022 87 aa4.11□□□□□ -1.75
HMBOX1-214ENST00000560357 ATP5EP2Q5VTU8 51 aa4.11□□□□□ -1.75
HMBOX1-214ENST00000560357 J3KT08 172 aa4.1□□□□□ -1.75
HMBOX1-214ENST00000560357 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
HMBOX1-214ENST00000560357 V9GYY9 64 aa4.1□□□□□ -1.75
HMBOX1-214ENST00000560357 SMIM20Q8N5G0 67 aa4.09□□□□□ -1.75
HMBOX1-214ENST00000560357 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
HMBOX1-214ENST00000560357 A8MWP4 228 aa4.08□□□□□ -1.76
HMBOX1-214ENST00000560357 Q8N9L7 120 aa4.08□□□□□ -1.76
HMBOX1-214ENST00000560357 ABCA13Q86UQ4 5058 aa4.08□□□□□ -1.76
HMBOX1-214ENST00000560357 K7EQZ3 153 aa4.07□□□□□ -1.76
HMBOX1-214ENST00000560357 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
HMBOX1-214ENST00000560357 IMUPQ9GZP8 106 aa4.07□□□□□ -1.76
HMBOX1-214ENST00000560357 NDUFB1O75438 58 aa4.06□□□□□ -1.76
HMBOX1-214ENST00000560357 HIST1H4AP62805 103 aaKnown RBP4.06□□□□□ -1.76
HMBOX1-214ENST00000560357 PRR15Q8IV56 129 aa4.06□□□□□ -1.76
HMBOX1-214ENST00000560357 RETNLBQ9BQ08 111 aa4.06□□□□□ -1.76
HMBOX1-214ENST00000560357 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
HMBOX1-214ENST00000560357 A0A087WVE0 104 aa4.04□□□□□ -1.76
HMBOX1-214ENST00000560357 IGHV6-1A0A0B4J1U7 121 aa4.03□□□□□ -1.76
HMBOX1-214ENST00000560357 NOTCH2NLQ7Z3S9 236 aa4.03□□□□□ -1.76
HMBOX1-214ENST00000560357 MMP24-AS1A0A0U1RRL7 71 aa4.02□□□□□ -1.77
HMBOX1-214ENST00000560357 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
HMBOX1-214ENST00000560357 C8orf17Q9NRJ1 99 aa4.02□□□□□ -1.77
HMBOX1-214ENST00000560357 HCG22E2RYF7 251 aa4.01□□□□□ -1.77
HMBOX1-214ENST00000560357 C8orf87E5RJ46 101 aa4.01□□□□□ -1.77
HMBOX1-214ENST00000560357 LINC00313P59037 77 aa4.01□□□□□ -1.77
HMBOX1-214ENST00000560357 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
HMBOX1-214ENST00000560357 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
HMBOX1-214ENST00000560357 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
HMBOX1-214ENST00000560357 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
HMBOX1-214ENST00000560357 CASC2Q6XLA1 102 aa3.99□□□□□ -1.77
HMBOX1-214ENST00000560357 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
HMBOX1-214ENST00000560357 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
HMBOX1-214ENST00000560357 PRR4Q16378 134 aa3.98□□□□□ -1.77
HMBOX1-214ENST00000560357 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
HMBOX1-214ENST00000560357 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
HMBOX1-214ENST00000560357 C9orf92A6NGG3 77 aa3.97□□□□□ -1.77
HMBOX1-214ENST00000560357 TMEM254Q8TBM7 123 aa3.97□□□□□ -1.77
HMBOX1-214ENST00000560357 MRPL34Q9BQ48 92 aaKnown RBP3.97□□□□□ -1.77
HMBOX1-214ENST00000560357 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
HMBOX1-214ENST00000560357 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.78
HMBOX1-214ENST00000560357 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
HMBOX1-214ENST00000560357 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
HMBOX1-214ENST00000560357 ATOX1O00244 68 aa3.94□□□□□ -1.78
HMBOX1-214ENST00000560357 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
HMBOX1-214ENST00000560357 OCR1Q9BZK8 76 aa3.93□□□□□ -1.78
HMBOX1-214ENST00000560357 A8MUU9 505 aa3.92□□□□□ -1.78
HMBOX1-214ENST00000560357 NDUFS5O43920 106 aa3.92□□□□□ -1.78
HMBOX1-214ENST00000560357 C20orf166-AS1Q96NR2 134 aa3.92□□□□□ -1.78
HMBOX1-214ENST00000560357 TRAV7A0A075B6U4 112 aa3.91□□□□□ -1.78
HMBOX1-214ENST00000560357 TP53AIP1Q9HCN2 124 aa3.91□□□□□ -1.78
HMBOX1-214ENST00000560357 UQCRQO14949 82 aa3.9□□□□□ -1.79
HMBOX1-214ENST00000560357 Q75L30 129 aa3.9□□□□□ -1.79
HMBOX1-214ENST00000560357 Q5W150 140 aa3.89□□□□□ -1.79
HMBOX1-214ENST00000560357 SERP2Q8N6R1 65 aa3.89□□□□□ -1.79
HMBOX1-214ENST00000560357 RPL37P61927 97 aaKnown RBP3.88□□□□□ -1.79
HMBOX1-214ENST00000560357 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
HMBOX1-214ENST00000560357 ZCCHC13Q8WW36 166 aaKnown RBP3.87□□□□□ -1.79
HMBOX1-214ENST00000560357 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
HMBOX1-214ENST00000560357 TRAV22A0A0B4J277 110 aa3.86□□□□□ -1.79
HMBOX1-214ENST00000560357 COX7CP15954 63 aa3.86□□□□□ -1.79
HMBOX1-214ENST00000560357 LPAP08519 4548 aa3.86□□□□□ -1.79
HMBOX1-214ENST00000560357 H0Y9P7 68 aa3.85□□□□□ -1.79
HMBOX1-214ENST00000560357 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.79
HMBOX1-214ENST00000560357 HERC1Q15751 4861 aa3.84□□□□□ -1.8
HMBOX1-214ENST00000560357 MP68P56378 58 aa3.83□□□□□ -1.8
HMBOX1-214ENST00000560357 A0A0U1RQV1 116 aa3.82□□□□□ -1.8
HMBOX1-214ENST00000560357 H3BPC8 53 aa3.82□□□□□ -1.8
HMBOX1-214ENST00000560357 CCDC179H3BU77 68 aa3.82□□□□□ -1.8
HMBOX1-214ENST00000560357 PCOTHQ58A44 107 aa3.82□□□□□ -1.8
HMBOX1-214ENST00000560357 C20orf197Q8N268 126 aa3.82□□□□□ -1.8
HMBOX1-214ENST00000560357 C1orf64Q8NEQ6 169 aa3.82□□□□□ -1.8
HMBOX1-214ENST00000560357 LINC00208Q96KT6 92 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms