RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 TEX15Q9BXT5 2789 aa3.04□□□□□ -1.92
TPM1-222ENST00000560131 GCN1Q92616 2671 aaKnown RBP3.04□□□□□ -1.92
TPM1-222ENST00000560131 ACACBO00763 2458 aa3.03□□□□□ -1.92
TPM1-222ENST00000560131 ZANQ9Y493 2812 aa3.03□□□□□ -1.92
TPM1-222ENST00000560131 DNAH1Q9P2D7 4330 aa3.03□□□□□ -1.92
TPM1-222ENST00000560131 SPTBN4Q9H254 2564 aa3.03□□□□□ -1.93
TPM1-222ENST00000560131 ITPR3Q14573 2671 aa3.02□□□□□ -1.93
TPM1-222ENST00000560131 ZNF861PO60384 105 aa3.02□□□□□ -1.93
TPM1-222ENST00000560131 PKD1L2Q7Z442 2459 aa3.01□□□□□ -1.93
TPM1-222ENST00000560131 ADM2Q7Z4H4 148 aa3.01□□□□□ -1.93
TPM1-222ENST00000560131 CHD8Q9HCK8 2581 aa3.01□□□□□ -1.93
TPM1-222ENST00000560131 SONP18583 2426 aaKnown RBP3□□□□□ -1.93
TPM1-222ENST00000560131 COL12A1Q99715 3063 aa3□□□□□ -1.93
TPM1-222ENST00000560131 POLQO75417 2590 aa3□□□□□ -1.93
TPM1-222ENST00000560131 Q5W150 140 aa3□□□□□ -1.93
TPM1-222ENST00000560131 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
TPM1-222ENST00000560131 CRYBG3Q68DQ2 2970 aa3□□□□□ -1.93
TPM1-222ENST00000560131 PANO1I0J062 215 aa2.99□□□□□ -1.93
TPM1-222ENST00000560131 IGLV7-43P04211 117 aa2.99□□□□□ -1.93
TPM1-222ENST00000560131 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
TPM1-222ENST00000560131 CFAP46Q8IYW2 2715 aa2.99□□□□□ -1.93
TPM1-222ENST00000560131 FBN2P35556 2912 aa2.98□□□□□ -1.93
TPM1-222ENST00000560131 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
TPM1-222ENST00000560131 FLNCQ14315 2725 aa2.98□□□□□ -1.93
TPM1-222ENST00000560131 FAM208BQ5VWN6 2430 aa2.97□□□□□ -1.93
TPM1-222ENST00000560131 CSAG1Q6PB30 78 aa2.97□□□□□ -1.93
TPM1-222ENST00000560131 FLNAP21333 2647 aaKnown RBP2.97□□□□□ -1.93
TPM1-222ENST00000560131 CCDC168Q8NDH2 2452 aa2.96□□□□□ -1.94
TPM1-222ENST00000560131 MYO18BQ8IUG5 2567 aa2.96□□□□□ -1.94
TPM1-222ENST00000560131 UBR5O95071 2799 aaPredicted RBP2.96□□□□□ -1.94
TPM1-222ENST00000560131 NBEAL2Q6ZNJ1 2754 aa2.96□□□□□ -1.94
TPM1-222ENST00000560131 UNC79Q9P2D8 2635 aa2.96□□□□□ -1.94
TPM1-222ENST00000560131 KMT2BQ9UMN6 2715 aaPredicted RBP2.96□□□□□ -1.94
TPM1-222ENST00000560131 K7EIL1 84 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 LY6G6CO95867 125 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 SSBP3-AS1Q7Z2R9 100 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 CACNA1AO00555 2505 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 PIEZO1Q92508 2521 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 HIVEP1P15822 2718 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 ABCA12Q86UK0 2595 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 SETD2Q9BYW2 2564 aaPredicted RBP2.95□□□□□ -1.94
TPM1-222ENST00000560131 TENM2Q9NT68 2774 aa2.95□□□□□ -1.94
TPM1-222ENST00000560131 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
TPM1-222ENST00000560131 SPACA4Q8TDM5 124 aa2.94□□□□□ -1.94
TPM1-222ENST00000560131 IGSF10Q6WRI0 2623 aa2.94□□□□□ -1.94
TPM1-222ENST00000560131 F8P00451 2351 aa2.94□□□□□ -1.94
TPM1-222ENST00000560131 NOTCH2Q04721 2471 aa2.93□□□□□ -1.94
TPM1-222ENST00000560131 A8MUU9 505 aa2.93□□□□□ -1.94
TPM1-222ENST00000560131 KRTAP1-4P0C5Y4 121 aa2.93□□□□□ -1.94
TPM1-222ENST00000560131 ROMO1P60602 79 aa2.93□□□□□ -1.94
TPM1-222ENST00000560131 MTORP42345 2549 aa2.92□□□□□ -1.94
TPM1-222ENST00000560131 NF1P21359 2839 aa2.92□□□□□ -1.94
TPM1-222ENST00000560131 C1orf134Q5TEV5 83 aa2.92□□□□□ -1.94
TPM1-222ENST00000560131 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
TPM1-222ENST00000560131 CSMD2Q7Z408 3487 aa2.91□□□□□ -1.94
TPM1-222ENST00000560131 ZNF462Q96JM2 2506 aa2.91□□□□□ -1.94
TPM1-222ENST00000560131 NIPBLQ6KC79 2804 aaeCLIP2.91□□□□□ -1.94
TPM1-222ENST00000560131 Q6ZRN7 208 aaPredicted RBP2.9□□□□□ -1.95
TPM1-222ENST00000560131 CIRBP-AS1Q8TBR5 109 aa2.9□□□□□ -1.95
TPM1-222ENST00000560131 APLNQ9ULZ1 77 aa2.89□□□□□ -1.95
TPM1-222ENST00000560131 ZNF469Q96JG9 3925 aaPredicted RBP2.88□□□□□ -1.95
TPM1-222ENST00000560131 ACANP16112 2415 aa2.88□□□□□ -1.95
TPM1-222ENST00000560131 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
TPM1-222ENST00000560131 LINC00304Q8N9R0 145 aa2.88□□□□□ -1.95
TPM1-222ENST00000560131 SMR3AQ99954 134 aa2.88□□□□□ -1.95
TPM1-222ENST00000560131 PSORS1C2Q9UIG4 136 aa2.88□□□□□ -1.95
TPM1-222ENST00000560131 PDZD2O15018 2839 aa2.88□□□□□ -1.95
TPM1-222ENST00000560131 Q6ZSA8 131 aa2.87□□□□□ -1.95
TPM1-222ENST00000560131 NBDYA0A0U1RRE5 68 aa2.86□□□□□ -1.95
TPM1-222ENST00000560131 H0YAA0 97 aa2.86□□□□□ -1.95
TPM1-222ENST00000560131 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
TPM1-222ENST00000560131 SPINK6Q6UWN8 80 aa2.86□□□□□ -1.95
TPM1-222ENST00000560131 UBE2DNLQ8IWF7 75 aa2.86□□□□□ -1.95
TPM1-222ENST00000560131 CENPEQ02224 2701 aa2.86□□□□□ -1.95
TPM1-222ENST00000560131 DNAH3Q8TD57 4116 aa2.85□□□□□ -1.95
TPM1-222ENST00000560131 TENM3Q9P273 2699 aa2.85□□□□□ -1.95
TPM1-222ENST00000560131 VWFP04275 2813 aa2.84□□□□□ -1.95
TPM1-222ENST00000560131 A0A1B0GU33 70 aa2.84□□□□□ -1.95
TPM1-222ENST00000560131 K7ERS5 55 aa2.84□□□□□ -1.95
TPM1-222ENST00000560131 DYNC2H1Q8NCM8 4307 aaKnown RBP2.83□□□□□ -1.96
TPM1-222ENST00000560131 USP24Q9UPU5 2620 aa2.83□□□□□ -1.96
TPM1-222ENST00000560131 A0A087WTM6 91 aa2.83□□□□□ -1.96
TPM1-222ENST00000560131 H1FX-AS1Q4G0G2 97 aa2.83□□□□□ -1.96
TPM1-222ENST00000560131 TEP1Q99973 2627 aaKnown RBP2.83□□□□□ -1.96
TPM1-222ENST00000560131 CUBNO60494 3623 aa2.82□□□□□ -1.96
TPM1-222ENST00000560131 J3QKU1 62 aa2.82□□□□□ -1.96
TPM1-222ENST00000560131 OTOGQ6ZRI0 2925 aa2.81□□□□□ -1.96
TPM1-222ENST00000560131 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
TPM1-222ENST00000560131 HUWE1Q7Z6Z7 4374 aaKnown RBP2.81□□□□□ -1.96
TPM1-222ENST00000560131 NSD1Q96L73 2696 aaPredicted RBP2.81□□□□□ -1.96
TPM1-222ENST00000560131 DNAH8Q96JB1 4490 aa2.81□□□□□ -1.96
TPM1-222ENST00000560131 NUPR2A6NF83 97 aa2.8□□□□□ -1.96
TPM1-222ENST00000560131 P0C880 135 aa2.8□□□□□ -1.96
TPM1-222ENST00000560131 COX6B2Q6YFQ2 88 aa2.8□□□□□ -1.96
TPM1-222ENST00000560131 DNAH10Q8IVF4 4471 aa2.8□□□□□ -1.96
TPM1-222ENST00000560131 PKD1L1Q8TDX9 2849 aa2.79□□□□□ -1.96
TPM1-222ENST00000560131 BAHCC1Q9P281 2608 aa2.79□□□□□ -1.96
TPM1-222ENST00000560131 HECTD1Q9ULT8 2610 aa2.79□□□□□ -1.96
TPM1-222ENST00000560131 TENM4Q6N022 2769 aa2.79□□□□□ -1.96
TPM1-222ENST00000560131 ATRQ13535 2644 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms